mRNA_E_fasciculatus_S2_contig8343.16479.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Match: HSP70 (protein n=10 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5JJT8_9PHAE) HSP 1 Score: 195 bits (495), Expect = 2.090e-56 Identity = 122/134 (91.04%), Postives = 126/134 (94.03%), Query Frame = 1
Query: 1 DKGRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVRDSALDEADKTTIETKISETIAWLDGNQSAEKEEYEEKQKDLEAVCNPIIQKMAGGAGXXXXXXXXXXXXXDMGGAGFPGG 402
DKGRLSAD+IERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKV + LDEADK TIETKISETIAWLD NQ+AEKEEYEEKQK+LE VCNPIIQKMAGGAGXXXXXXXXXXXX DMGGAGFP G
Sbjct: 509 DKGRLSADEIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVS-AQLDEADKKTIETKISETIAWLDANQNAEKEEYEEKQKELEGVCNPIIQKMAGGAGXXXXXXXXXXXX-DMGGAGFPAG 640
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Match: HSP70 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY2_9PHAE) HSP 1 Score: 186 bits (473), Expect = 7.400e-53 Identity = 118/139 (84.89%), Postives = 121/139 (87.05%), Query Frame = 1
Query: 7 GRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVRD--------SALDEADKTTIETKISETIAWLDGNQSAEKEEYEEKQKDLEAVCNPIIQKMAGGAGXXXXXXXXXXXXX--DMGGAGF 393
GRLSAD+IERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTIN+EK S LD ADKTTIETKISETIAWLDGNQSAEKEEYEEKQK+LEAVCNPIIQKMAGGAG XXXXXXXXXX DMGGAGF
Sbjct: 575 GRLSADEIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINDEKAGRRVVPVKVASKLDAADKTTIETKISETIAWLDGNQSAEKEEYEEKQKELEAVCNPIIQKMAGGAGGMPXXXXXXXXXXXXDMGGAGF 713
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Match: Heat (shock protein 70 (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ7_FUCSE) HSP 1 Score: 180 bits (456), Expect = 9.620e-52 Identity = 102/133 (76.69%), Postives = 108/133 (81.20%), Query Frame = 1
Query: 1 DKGRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVRDSALDEADKTTIETKISETIAWLDGNQSAEKEEYEEKQKDLEAVCNPIIQKMAGGAGXXXXXXXXXXXXXDMGGAGFPG 399
DKGRLSAD+IERMVEEAERYKAEDDVQK RVEGKN+LENYAYSMRNTINEEKV S LD ADK+ IE+KISETIAWLD NQ+AEKEEYEEKQK+LE VC PIIQKMA G DMGGAGFPG
Sbjct: 364 DKGRLSADEIERMVEEAERYKAEDDVQKQRVEGKNALENYAYSMRNTINEEKVA-SQLDAADKSAIESKISETIAWLDTNQNAEKEEYEEKQKELEGVCTPIIQKMAAAGGGGMPGGMGGMP--DMGGAGFPG 493
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P9_HETAK) HSP 1 Score: 154 bits (388), Expect = 9.670e-45 Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 1
Query: 1 DKGRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVRDSALDEADKTTIETKISETIAWLDGNQSAEKEEYEEKQKDLEAVCNPIIQKMAGGAG 333
DKGRLSAD+IERMVEEAERYKAED+V + R+E KNSLENYAY +++TI +EKV D +D DK+ +ETK+SE +AWLD NQSAEKEEYEEKQK+LE V P+ +KMAGGAG
Sbjct: 40 DKGRLSADEIERMVEEAERYKAEDEVNRQRIEAKNSLENYAYQIKSTIGDEKVADK-IDAGDKSAVETKVSEILAWLDANQSAEKEEYEEKQKELEGVAQPVFEKMAGGAG 149
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Match: Heat (shock protein 70 n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB83_VAULI) HSP 1 Score: 150 bits (379), Expect = 7.310e-40 Identity = 76/111 (68.47%), Postives = 97/111 (87.39%), Query Frame = 1
Query: 1 DKGRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVRDSALDEADKTTIETKISETIAWLDGNQSAEKEEYEEKQKDLEAVCNPIIQKMAGGAG 333
DKGRLSAD+IERMVEEAERYKAED+V K R+E KN LENYAYS+RNT+N ++ D +D +DK+++++KI++TI WL+ NQ+AEKEEY+EKQK+LE V NPI+QKMAGGAG
Sbjct: 509 DKGRLSADEIERMVEEAERYKAEDEVNKQRIEAKNGLENYAYSLRNTLNGPEIGDK-MDPSDKSSLDSKINDTINWLESNQNAEKEEYQEKQKELENVANPILQKMAGGAG 618
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Match: 70 (kDa heat shock protein (Fragment) n=2 Tax=Leucocryptos marina TaxID=299206 RepID=B5A524_LEUMA) HSP 1 Score: 139 bits (351), Expect = 8.630e-40 Identity = 72/111 (64.86%), Postives = 90/111 (81.08%), Query Frame = 1
Query: 1 DKGRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVRDSALDEADKTTIETKISETIAWLDGNQSAEKEEYEEKQKDLEAVCNPIIQKMAGGAG 333
DKGRLS DDIERMV+EAE+YKAED+ KSR+E KN LENYAYSMRN++++EK++D +D ADK ++T I ETI+WLD NQ EK+E+E KQKDLEA+ NPI+ K GAG
Sbjct: 13 DKGRLSKDDIERMVQEAEKYKAEDESNKSRIEAKNGLENYAYSMRNSMDDEKLKDK-IDAADKEKLKTAIDETISWLDANQMGEKDEFEAKQKDLEAIANPIMMKAYQGAG 122
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Match: Uncharacterized (protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A3R6YRE6_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.520e-39 Identity = 73/112 (65.18%), Postives = 93/112 (83.04%), Query Frame = 1
Query: 1 DKGRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVRDSALDEADKTTIETKISETIAWLDGNQSAEKEEYEEKQKDLEAVCNPIIQKM--AGGA 330
DKGRL+ DDIERMV+EAE+YK+ED+ K R+E KN LENYAY++RNT+N+EK++ LDE+DK I+ K++ETI WLD NQSAEKEE+E KQK+LE V NPI+QK+ AGGA
Sbjct: 58 DKGRLTKDDIERMVQEAEKYKSEDEANKLRIEAKNGLENYAYNLRNTLNDEKLQ-GKLDESDKKAIDDKVTETINWLDANQSAEKEEFEAKQKELEGVANPIMQKLYAAGGA 168
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Match: Aste57867_4298 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCI7_9STRA) HSP 1 Score: 143 bits (360), Expect = 4.470e-39 Identity = 84/132 (63.64%), Postives = 106/132 (80.30%), Query Frame = 1
Query: 1 DKGRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVRDSALDEADKTTIETKISETIAWLDGNQSAEKEEYEEKQKDLEAVCNPIIQKMAGGAGXXXXXXXXXXXXXDMGGAGFP 396
DKGRL+ DDIERMV+EAE+YK+ED+ K R+E KN LENY+Y++RNT+N+EK++ +DE+DK I+ K++ETI WLD NQSAEKEEYE KQK+LE + NPI+QK+ AG XXXXXXXX DMGGAG P
Sbjct: 194 DKGRLTKDDIERMVQEAEKYKSEDEANKLRIEAKNGLENYSYNLRNTLNDEKLQ-GKIDESDKKAIDDKVTETINWLDANQSAEKEEYEAKQKELEGIANPIMQKLYASAGGAPXXXXXXXX--DMGGAGAP 322
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1V9_9STRA) HSP 1 Score: 140 bits (352), Expect = 4.950e-39 Identity = 74/111 (66.67%), Postives = 93/111 (83.78%), Query Frame = 1
Query: 1 DKGRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVRDSALDEADKTTIETKISETIAWLDGNQSAEKEEYEEKQKDLEAVCNPIIQKMAGGAG 333
DKGRLSAD+IERMV+EAE+YKAED+ + RVE KNSLENY YSM++TI +EK+ S L E DK++I +KI E+I+WL+ N +AEKEEYE KQK+LEAV NPI+Q +AGGAG
Sbjct: 74 DKGRLSADEIERMVQEAEQYKAEDEANRLRVEAKNSLENYCYSMKSTIADEKLA-SKLSEEDKSSITSKIDESISWLEANPTAEKEEYEAKQKELEAVVNPILQSLAGGAG 183
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HFD5_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.520e-38 Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 1
Query: 1 DKGRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEEKVRDSALDEADKTTIETKISETIAWLDGNQSAEKEEYEEKQKDLEAVCNPIIQKMAGGAG 333
DKGRLS DI+RMV EAE+YK+ED+ K R+E KN+LENYAY++RNT+N+EK++D + E DK I+ K++ETI WLD NQSAEKEE+E KQK+LE V NPI+QKM AG
Sbjct: 1 DKGRLSQADIDRMVAEAEKYKSEDEANKIRIEAKNALENYAYNLRNTLNDEKLKDQ-ITEDDKKAIDDKVTETINWLDANQSAEKEEFEGKQKELEGVANPILQKMYAAAG 110 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8343.16479.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8343.16479.1 >prot_E_fasciculatus_S2_contig8343.16479.1 ID=prot_E_fasciculatus_S2_contig8343.16479.1|Name=mRNA_E_fasciculatus_S2_contig8343.16479.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=134bp DKGRLSADDIERMVEEAERYKAEDDVQKSRVEGKNSLENYAYSMRNTINEback to top mRNA from alignment at E_fasciculatus_S2_contig8343:3..730+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8343.16479.1 ID=mRNA_E_fasciculatus_S2_contig8343.16479.1|Name=mRNA_E_fasciculatus_S2_contig8343.16479.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=728bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8343:3..730+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8343:3..730+ >mRNA_E_fasciculatus_S2_contig8343.16479.1 ID=mRNA_E_fasciculatus_S2_contig8343.16479.1|Name=mRNA_E_fasciculatus_S2_contig8343.16479.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=402bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8343:3..730+ (Ectocarpus fasciculatus EfasUO2)back to top |