mRNA_E_fasciculatus_S2_contig83.16444.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig83.16444.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU72_ECTSI) HSP 1 Score: 917 bits (2370), Expect = 0.000e+0 Identity = 598/697 (85.80%), Postives = 621/697 (89.10%), Query Frame = 1
Query: 316 ERQEEESTLMRRKCAKSIYELSTRADKGPLLIGNGVLQALSALSLMEDPRTNRYVGASYVNIAALGREVCVDMLKNQVVRSLHRLWQRAYSLAHCSRTSELSGVSKGSH---------------TSGGGSATTTPTAVTETEEEWSVRRCGLDILDQAAVALCHLSVPMGAESIMMQERGMGAIMWYARGDHDNEQLKVVGLQCLVNFHRNTPNGTFHEAILPCLKELGQSATTGIRRYTGQAICALGANKQGASQLLAGGVLTILANLSKPDHLTRDGESAGGHDEXXXXXXXXXXXXXXXXN---AADGLLLEACAHAASNLTVANAEFVRQALIAPATVADVLEILYLGGDGGXXXXXXSSVGTIKSNANVRGNKRAAACRLNSARVLRSIFSDADASDVARLVQLGFLRKTGQFFGQAAAQNDPKAQQLLAHSVWHLSATLTDVKPLEPQXXXXXXXXXXXXSPTDSGSPSFTGEAISALSRGGLQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVSVSVSEANTVRSSRASVRPVDRARGSMILRQNSPGGGLSAARGGLVAGRKLXXXXXXXXXXXXXXXXXXXSHGGGAGLEGGVPRALGPGLSPDTTSSGAADSSPSEVADKGPHVVACGVMHHLLRLAESGTTGFVRQGSNK 2352
ERQEEE+TLMRRKCAKSIYELSTRADKGPLLIGNGV+QALSALSL+EDPRT+RYVGASYVNIAALGREVCVDMLKNQVVR LHRLWQRAYSLAHC RTS+LS VSKGS+ T+GGGSAT+ P+ V+ET+EEWSVRRCGLD+LDQAAVALCHLSVP+GAESIMMQERGMGAIMWYARGDHDNEQLKVVGLQCLVNFHRNTPNGTFHEA+LPCLKELGQSATTGIRRYTGQAICALGANK GASQLLAGGVLTILANLSKP++LTRD ESA GHDE XXXXXX N AADGLLLEA AHAASNLTVANAEFVRQALIAPATVA+VLEILYLGGDGGXXXXXX VG +KSNANVRGNKRAAACRLNSARVLRSIFS+ADASDVARLVQLGFLRKTGQFFGQAAAQ DPKAQQLLAHSVWHLSATLTDVKPLE Q XXXXXXXXX PTDSGSP+FTGEAISALS GGLQQH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SVVSVSVSEANTVRSSRASVRPVDRA+GSMILRQN PGG LSAARGGLV GRKL XXXXXXXXXX SH GG GLEGGVP ALG GLS DTTS GAADSSPSEV +KGPHVVACGVMHHLLRLAESGTTGFVRQGS+K
Sbjct: 25 ERQEEEATLMRRKCAKSIYELSTRADKGPLLIGNGVIQALSALSLVEDPRTSRYVGASYVNIAALGREVCVDMLKNQVVRCLHRLWQRAYSLAHCRRTSDLSSVSKGSNXXXXXXXXXXXXXXXTNGGGSATSAPSVVSETDEEWSVRRCGLDVLDQAAVALCHLSVPIGAESIMMQERGMGAIMWYARGDHDNEQLKVVGLQCLVNFHRNTPNGTFHEAMLPCLKELGQSATTGIRRYTGQAICALGANKHGASQLLAGGVLTILANLSKPNNLTRDCESASGHDEGSGGDXXXXXXMGREGNPAAAADGLLLEAFAHAASNLTVANAEFVRQALIAPATVAEVLEILYLGGDGGXXXXXXXXVGAMKSNANVRGNKRAAACRLNSARVLRSIFSEADASDVARLVQLGFLRKTGQFFGQAAAQKDPKAQQLLAHSVWHLSATLTDVKPLESQPPPXXXXXXXXXPPTDSGSPAFTGEAISALSMGGLQQHQQQYKGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-SVVSVSVSEANTVRSSRASVRPVDRAKGSMILRQNFPGGALSAARGGLVGGRKLVRXXXXXXXXXXESLSETSSHRGGVGLEGGVPSALGSGLSLDTTS-GAADSSPSEVDEKGPHVVACGVMHHLLRLAESGTTGFVRQGSHK 719 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig83.16444.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig83.16444.1 >prot_E_fasciculatus_S2_contig83.16444.1 ID=prot_E_fasciculatus_S2_contig83.16444.1|Name=mRNA_E_fasciculatus_S2_contig83.16444.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=785bp MLAPFQRGAPRPREDAKKRRLSTDRPLVEKGWRDFEEDTSEGILYQARTGback to top mRNA from alignment at E_fasciculatus_S2_contig83:26790..35275- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig83.16444.1 ID=mRNA_E_fasciculatus_S2_contig83.16444.1|Name=mRNA_E_fasciculatus_S2_contig83.16444.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=8486bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig83:26790..35275- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig83:26790..35275- >mRNA_E_fasciculatus_S2_contig83.16444.1 ID=mRNA_E_fasciculatus_S2_contig83.16444.1|Name=mRNA_E_fasciculatus_S2_contig83.16444.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2355bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig83:26790..35275- (Ectocarpus fasciculatus EfasUO2)back to top |