mRNA_E_fasciculatus_S2_contig827.16418.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT02_9PHAE) HSP 1 Score: 264 bits (675), Expect = 1.420e-82 Identity = 166/214 (77.57%), Postives = 173/214 (80.84%), Query Frame = 1
Query: 550 MNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELFGGTLSLSGAEGCAGQRERTSVQTAAXXXXXXXXXXXXXLPSSTMK------HNNSTRTYSSAVENWSVARLFVDQGFRDTPGGGFQRAGDPAEPSGRLGWGSLAGIGLSSPCGGGLADS----GSSNFGRENGERGAGNG-AAGFPSDGG-CPVPVIRHVALQL 1155
MNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELF GTLSL GAEG AGQRERTSV XXXXXXXXXXXXX HN+STR+YSSAVE WSVARLFVDQG R++PGG FQR G PAEPSGRLGW SLAG+G SSP GGGL DS GSS GR+ GERGAG+G AAGF S GG CPV VIRHVALQL
Sbjct: 1 MNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELFSGTLSLLGAEGGAGQRERTSVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNSSTRSYSSAVEKWSVARLFVDQGARESPGG-FQRVGAPAEPSGRLGWSSLAGVGASSPSGGGLEDSVSSNGSSGIGRKKGERGAGDGGAAGFSSGGGGCPVAVIRHVALQL 213
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Match: N/a (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS44_ECTSI) HSP 1 Score: 195 bits (496), Expect = 9.220e-51 Identity = 100/105 (95.24%), Postives = 100/105 (95.24%), Query Frame = 1
Query: 433 MPLLGHRYRYVSTIGTGRFSDVVRAQDTFRPGRSVAVKVMNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELFGGTLSLSGAEGCAGQR 747
MPLLGHRYRYVSTIGTGRFSDVVRAQDTFRPGRSVAVKVMNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELF GTLSLS A G GQR
Sbjct: 1 MPLLGHRYRYVSTIGTGRFSDVVRAQDTFRPGRSVAVKVMNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELFSGTLSLS-AVGRLGQR 104
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST04_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.580e-16 Identity = 52/117 (44.44%), Postives = 63/117 (53.85%), Query Frame = 1
Query: 1090 AAGFPSDGGCPVPVIRHVALQLVSALLLLHSHGLIHADVKPANVFLRMEGSRQEGEEEEAGCRRLCLADFVSGRAGGSGVERLTVKLGDLGSAIHRSETYLFYGDFEIQTLAYRAPE 1440
A P P+ V+R VAL L+SALL L G+IHAD+KP NV L + E EA +L F VKL D G+AIHR+E L++ FEIQTLAYRAPE
Sbjct: 1 AGDIPVSSHTPLGVVRRVALDLISALLCLGHQGIIHADIKPENVLLSTD---PEPPATEASFGQLMSPPF-------------RVKLADFGNAIHRAEAPLYHATFEIQTLAYRAPE 101
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MPE9_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 2.500e-9 Identity = 38/112 (33.93%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 1123 VPVIRHVALQLVSALLLLHSHGLIHADVKPANVFLR--MEGSRQEGEEEEAGCRRLCLADFVSGRAGGSGVER----LTVKLGDLGSAIHRSETYLFYGDFEIQTLAYRAPE 1440
+P I + +Q++S L +LH+ +IH D+KP N+ + + + + EE EA R + +A G + + +K+ D G+AI RS+++L+Y +FE+Q+L YRAPE
Sbjct: 624 LPEIAKITVQIISCLQMLHAENIIHGDLKPENIIFKHPIRLTSEHIEEHEASFRGM--------KASTEGPRKKFTSVALKIADFGNAIDRSDSHLYYDNFEVQSLLYRAPE 727
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RRA4_9GLOM) HSP 1 Score: 65.5 bits (158), Expect = 1.010e-7 Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 1
Query: 427 AAMPLLGHRYRYVSTIGTGRFSDVVRAQDTFRPGRSVAVKVMNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELF-GGTLSL 717
A+ +L RYR + +G G FS V A+D +R G VA+K+M IG E + +R+L+ E V++LL+ Y H+CLV E + GG L +
Sbjct: 124 ASQLILARRYRVIKIVGEGAFSKTVCAEDLYRNGSLVAIKIMVSQYNHIGFEECKKLRYLNLHDIYENTHVIKLLNTFLYDKHFCLVFEYYRGGVLKV 221
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Match: Yak1p (n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015KL81_RHIIW) HSP 1 Score: 63.5 bits (153), Expect = 3.270e-7 Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 1
Query: 439 LLGHRYRYVSTIGTGRFSDVVRAQDTFRPGRSVAVKVMNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELF-GGTLSL 717
+L RYR + +G G FS V A+D +R G VAVK+M+ +G E + +R+L+ E + +LL+ Y H+CLV E + GG L +
Sbjct: 128 ILARRYRVIKIVGEGAFSKTVCAEDLYRNGSLVAVKIMDSQYNHVGFEECKKLRYLNLHDIYENIHISKLLNTFLYDKHFCLVFEYYRGGVLKV 221
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Match: Kinase-like (protein n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1F2S2_9GLOM) HSP 1 Score: 63.5 bits (153), Expect = 4.130e-7 Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 1
Query: 439 LLGHRYRYVSTIGTGRFSDVVRAQDTFRPGRSVAVKVMNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELF-GGTLSL 717
+L RYR + +G G FS V A+D +R G VAVK+M+ +G E + +R+L+ E + +LL+ Y H+CLV E + GG L +
Sbjct: 128 ILARRYRVIKIVGEGAFSKTVCAEDLYRNGSLVAVKIMDSQYNHVGFEECKKLRYLNLHDIYENIHISKLLNTFLYDKHFCLVFEYYRGGVLKV 221
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Match: Mitogen-activated (protein kinase kinase kinase n=3 Tax=Apis cerana TaxID=7461 RepID=A0A2A3EGR5_APICC) HSP 1 Score: 60.5 bits (145), Expect = 6.400e-6 Identity = 39/114 (34.21%), Postives = 54/114 (47.37%), Query Frame = 1
Query: 1105 SDGGCPVPVIRHVALQLVSALLLLHSHGLIHADVKPANVFLRMEGSRQEGEEEEAGCRRLCLADFVSGRAGGSGVERLTVKLGDLGSAIHRSETYLFYGDFE--IQTLAYRAPE 1440
S+ G +IR QL+SA+++LHSHG++H D+KPAN+FL EG+ CL KLGD GSA+ G+ + + T AY APE
Sbjct: 1157 SENGLSESLIRKYTYQLISAVVILHSHGIVHRDIKPANIFLTDEGN--------------CL------------------KLGDFGSAVQIKAHTTMPGELQGFVGTQAYMAPE 1238
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Match: Mitogen-activated (protein kinase kinase kinase 4 n=1 Tax=Apis cerana TaxID=7461 RepID=V9IBF5_APICE) HSP 1 Score: 55.8 bits (133), Expect = 8.140e-6 Identity = 23/46 (50.00%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 1105 SDGGCPVPVIRHVALQLVSALLLLHSHGLIHADVKPANVFLRMEGS 1242
S+ G +IR QL+SA+++LHSHG++H D+KPAN+FL EG+
Sbjct: 64 SENGLSESLIRKYTYQLISAVVILHSHGIVHRDIKPANIFLTDEGN 109
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Match: mitogen-activated (protein kinase kinase kinase 4 isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED888CA) HSP 1 Score: 58.9 bits (141), Expect = 2.030e-5 Identity = 38/112 (33.93%), Postives = 50/112 (44.64%), Query Frame = 1
Query: 1111 GGCPVPVIRHVALQLVSALLLLHSHGLIHADVKPANVFLRMEGSRQEGEEEEAGCRRLCLADFVSGRAGGSGVERLTVKLGDLGSAIHRSETYLFYGDFE--IQTLAYRAPE 1440
GG P P+IR QL+ A+ LH HG++H D+K AN+FL EG+ CL KLGD GSA+ G+ + + T AY APE
Sbjct: 1615 GGLPEPIIRRYTFQLLQAVATLHHHGIVHRDIKSANIFLTDEGN--------------CL------------------KLGDFGSAVQIKAHTTLPGELQSFVGTQAYMAPE 1694 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig827.16418.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig827.16418.1 >prot_E_fasciculatus_S2_contig827.16418.1 ID=prot_E_fasciculatus_S2_contig827.16418.1|Name=mRNA_E_fasciculatus_S2_contig827.16418.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=487bp MEPYRRESTGKFPLSSLAEETCRGVGITGASAPCRALLGLRALYATVDANback to top mRNA from alignment at E_fasciculatus_S2_contig827:14821..18520- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig827.16418.1 ID=mRNA_E_fasciculatus_S2_contig827.16418.1|Name=mRNA_E_fasciculatus_S2_contig827.16418.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3700bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig827:14821..18520- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig827:14821..18520- >mRNA_E_fasciculatus_S2_contig827.16418.1 ID=mRNA_E_fasciculatus_S2_contig827.16418.1|Name=mRNA_E_fasciculatus_S2_contig827.16418.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1461bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig827:14821..18520- (Ectocarpus fasciculatus EfasUO2)back to top |