mRNA_E_fasciculatus_S2_contig825.16397.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig825.16397.1
Unique NamemRNA_E_fasciculatus_S2_contig825.16397.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB67_ECTSI)

HSP 1 Score: 545 bits (1403), Expect = 1.430e-194
Identity = 262/310 (84.52%), Postives = 276/310 (89.03%), Query Frame = 1
Query:    1 MTAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELIVESFEPLHTANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVCAAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEVDDNPEGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVITDERQGSGFSYITGWLSAFTCFDDDGDFLGNNTKITFRDENWNLVEKVGDFPMIPGDKICHNVVSCPVKLFDDTVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVKE 930
            MTAYNTHCNLVISPDDVWLTILAQ CAYVNKNAE LRDRIVEHEGKKEL V S   LHTA+Y RMIRDLLGLIRQNIKSPE ADWFRPGFSTTTEKDEVCAAATAMAS+QAYF+Y +   CGIPSVTLMGTVGDWKLLREK+ERLLEFEVD NP+GKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRV+T E +GSG SYITGW+SAFTCF  D +FLG  TK   RDEN N+VEK   FPMIP  +IC +VVSCPVK+ D TVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVKE
Sbjct:    1 MTAYNTHCNLVISPDDVWLTILAQSCAYVNKNAEGLRDRIVEHEGKKELRVSSDGTLHTADYPRMIRDLLGLIRQNIKSPEFADWFRPGFSTTTEKDEVCAAATAMASLQAYFEYTMMYRCGIPSVTLMGTVGDWKLLREKIERLLEFEVDGNPQGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVLTHEPEGSGVSYITGWVSAFTCFGSDVNFLGKRTKFMSRDENRNIVEKDWGFPMIPDQEICIDVVSCPVKIIDATVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVKE 310          
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX2_9PHAE)

HSP 1 Score: 523 bits (1346), Expect = 1.330e-185
Identity = 253/310 (81.61%), Postives = 273/310 (88.06%), Query Frame = 1
Query:    4 TAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELIVESFEPLHT-ANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVCAAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEVDDNPEGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVITDERQGSGFSYITGWLSAFTCFDDDGDFLGNNTKITFRDENWNLVEKVGDFPMIPGDKICHNVVSCPVKLFDDTVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVKE 930
            TAY+THCNLVISPDDVWLTILAQFCAYVNKNAE LRDRIV+HEGKK LIV S   L T A+Y RMIRDLLGLIRQNIKSPELADWFRPGFSTTTE+DEVCAAATAMAS+Q YF++ +R GCGIPSVTL GTV DWKLLREKVERLLEFEVD NPEG+VMQ WVGYLRKVCDGFVESAEHPGSPETLEFWDRV+TD+R GSG +YITGW+SAFTCF+ DG FLG  TK+   DEN  +VEK  +FP+I G  ICHNVVSCPVK+ D +  REYDGTLFAGQTVCEAERPG TGHPTVRPRSDWCMAVAVKE
Sbjct:   19 TAYDTHCNLVISPDDVWLTILAQFCAYVNKNAEGLRDRIVQHEGKKALIVVSDGTLRTTADYPRMIRDLLGLIRQNIKSPELADWFRPGFSTTTERDEVCAAATAMASLQNYFEFRMRRGCGIPSVTLRGTVRDWKLLREKVERLLEFEVDGNPEGEVMQIWVGYLRKVCDGFVESAEHPGSPETLEFWDRVLTDKRGGSGVNYITGWVSAFTCFNSDGKFLGKRTKLRSFDENLKIVEKEVEFPIIGGRDICHNVVSCPVKIVDVSDRREYDGTLFAGQTVCEAERPGATGHPTVRPRSDWCMAVAVKE 328          
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Match: Uncharacterized (protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FL08_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 1.060e-154
Identity = 211/309 (68.28%), Postives = 248/309 (80.26%), Query Frame = 1
Query:    1 MTAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELIVESFEPLHTANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVCAAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEVDDNPEGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVITDERQGSGFSYITGWLSAFTCFDDDGDFLGNNTKITFRDENWNLVEKVGDFPMIPGDKICHNVVSCPVKLFDDTVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVK 927
            MTAYNTHC L +SPDDVWLTIL+QFCAYVNKNAE LRDR+VEHEGKK L VE +  L TA+YA++I+DLLG IRQNIKSPELADWFRPGFSTTTE DEVCAAA AMAS+QAYF+Y +   CGIPSVTLMGTV DWKLLREK+ER+LEFEV  NPEGKVM+ WVGYLRKVCDGFVESAEHP S  T++FWD+V++ + +GSG +Y TGW+SAF+CFD DG+F+G N  +             G+FP+I    +CHNV+SCPV + D+  G EYD TLF GQ   +AE+  E GHPTVRPR+DWC+AVAVK
Sbjct:  104 MTAYNTHCALEVSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKGLTVEGYGSLETADYAKLIKDLLGQIRQNIKSPELADWFRPGFSTTTETDEVCAAAAAMASLQAYFEYTMCLACGIPSVTLMGTVEDWKLLREKIERMLEFEVLGNPEGKVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKVLSHKNRGSGMNYTTGWVSAFSCFDKDGNFIGKNMSMG------------GEFPLIRDSALCHNVISCPVTIDDN--GHEYDATLFTGQVAFKAEQGAEGGHPTVRPRNDWCLAVAVK 398          
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F2_ECTSI)

HSP 1 Score: 423 bits (1088), Expect = 4.180e-143
Identity = 205/313 (65.50%), Postives = 241/313 (77.00%), Query Frame = 1
Query:    1 MTAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELIVESFEPLHTANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVCAAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEVDDNPEGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVITDERQGSGFSYITGWLSAFTCFDDDGDFLGNNTKI----TFRDENWNLVEKVGDFPMIPGDKICHNVVSCPVKLFDDTVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVK 927
            MTAYN H +LV+ PDDVWLTILAQFC YVNKNAE LRDRIV+HEGKK L VE    L + +Y  +IR++L  IR+NIK+PELADWF+PGF+TTT+ DEV AAATAMAS+QAYF Y I   CG+PSVTLMGTV DWKLLR KVERLL+FEV DNPEG VM+ WVGYLRKVCDGFVESAEHP S ETL+FWD+V++    GSG SYITGWLSAF CF+ DG F+G NT+I    ++RD          ++P+I   +ICHNVVSCPVK+ D+  G EYD TLF GQ   EA   GE G+PT+RPR+DWC+AV  K
Sbjct:  225 MTAYNRHADLVLRPDDVWLTILAQFCLYVNKNAESLRDRIVDHEGKKVLRVEGGGNLFSLDYPALIREMLAKIRENIKTPELADWFKPGFTTTTDTDEVAAAATAMASLQAYFSYEIHAECGLPSVTLMGTVQDWKLLRAKVERLLDFEVIDNPEGDVMEVWVGYLRKVCDGFVESAEHPDSTETLQFWDKVVSHIGGGSGVSYITGWLSAFACFNKDGKFMGRNTEIPGTGSYRDTAVPDKSNECEYPLIETSQICHNVVSCPVKINDN--GVEYDSTLFVGQVALEARNGGEGGYPTIRPRNDWCLAVPAK 535          
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ89_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 2.020e-139
Identity = 192/229 (83.84%), Postives = 207/229 (90.39%), Query Frame = 1
Query:    1 MTAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELIVESFEPLHTANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVCAAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEVDDNPE-GKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVITDERQGSGFSYITGWLSAFTCFDDDGDFLGNNTKI 684
            MTAYNTHCNLVISPDDVWL ILAQFCAYVNKNAE LRDRIV+HEGKKEL+V S   L TA+Y RMIRDLLGLIRQNIKSPELADWFRPGFSTTTE+DEVCAAATAMAS+Q YF+Y    GCGIPSVTL GTVGDWKLLREK+ERLLEFEVD NPE  KVMQ WVGYLRKVCDGFV+SAEHPGSPETLEFWDRV+TD+RQGSG +YITGW+SAFTCF+ DG FLG +TK+
Sbjct:    1 MTAYNTHCNLVISPDDVWLAILAQFCAYVNKNAEGLRDRIVQHEGKKELVVASDGTLRTADYPRMIRDLLGLIRQNIKSPELADWFRPGFSTTTERDEVCAAATAMASLQGYFEYSFMCGCGIPSVTLRGTVGDWKLLREKIERLLEFEVDGNPEEDKVMQIWVGYLRKVCDGFVKSAEHPGSPETLEFWDRVLTDKRQGSGVNYITGWVSAFTCFNSDGKFLGKHTKL 229          
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K056_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 4.060e-131
Identity = 192/309 (62.14%), Postives = 223/309 (72.17%), Query Frame = 1
Query:    1 MTAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELIVESFEPLHTANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVCAAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEVDDNPEGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVITDERQGSGFSYITGWLSAFTCFDDDGDFLGNNTKITFRDENWNLVEKVGDFPMIPGDKICHNVVSCPVKLFDDTVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVK 927
            MTAYNTHC LV+SPDDVWLTIL+QFCAYVNKNAE LRDR+VEHEGKK+L V                       QNIK PELADWF PGFSTTTE DEVCAAATAMAS+Q YF+Y +   CGIPSV LMGTV DWKLLREK+ER+LEFEV DNPEGKVM+ WVGYLRKVCDGFVESAEHP S  T++FWD+V +     SG ++ TGW+SAF+CFD DG+F+G NT             K G+FP++    +CHNVVSCPV + D+  G  YD TL  GQ    AER  + G+PT+ PR+DWC+AVAVK
Sbjct:   89 MTAYNTHCALVVSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKKLTVYG---------------------QNIKPPELADWFLPGFSTTTETDEVCAAATAMASLQEYFNYEMCLRCGIPSVALMGTVEDWKLLREKIERMLEFEVLDNPEGKVMELWVGYLRKVCDGFVESAEHPNSAATVDFWDKVFSHRHFVSGVTFTTGWVSAFSCFDKDGNFIGKNTG------------KGGEFPLVTS--LCHNVVSCPVAIDDNGYG--YDATLVTGQVAYRAERGAKAGYPTMCPRNDWCLAVAVK 360          
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ8_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 1.160e-130
Identity = 196/309 (63.43%), Postives = 229/309 (74.11%), Query Frame = 1
Query:    1 MTAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELIVESFEPLHTANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVCAAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEVDDNPEGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVITDERQGSGFSYITGWLSAFTCFDDDGDFLGNNTKITFRDENWNLVEKVGDFPMIPGDKICHNVVSCPVKLFDDTVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVK 927
            MTAYNTHC LV+SPDDVWLTIL+QFCAYVNKNAE LRDR+VEHEGKK+L V  +  L TA+YAR+I+DLLG IRQNIKSPEL   F PGFSTTTE DEVCAAATAMAS+Q  F+Y +   CGIPSV LMGTV DWKLLREK+ER+LEFEV DNPEGKVM+ WVGYLRKVCDGFVESAEHP S  T++FWD+V              GW+SAF+CFD DG+F+G NT             + G+FP++    + HNVVSCPV + D+  G  YD TL  GQ    AER  +  +PT+ PR+DWC+AVAVK
Sbjct:   85 MTAYNTHCALVVSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKKLTVYGYGSLETADYARLIKDLLGQIRQNIKSPEL---FLPGFSTTTETDEVCAAATAMASLQECFNYEMCLRCGIPSVALMGTVEDWKLLREKIERMLEFEVLDNPEGKVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKV--------------GWVSAFSCFDKDGNFIGKNTG------------EGGEFPLVTS--LFHNVVSCPVAIDDNGYG--YDATLLTGQVAYRAERGAKGAYPTMCPRNDWCLAVAVK 360          
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H3_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 5.890e-129
Identity = 194/315 (61.59%), Postives = 228/315 (72.38%), Query Frame = 1
Query:    1 MTAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELIVESFEPLHTANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVCAAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEVDDNPEGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVITDERQGSGFSYITGWLSAFTCFDDDGDFLGNNT---KITFRDENWNLVEKVGD--FPMIPGDKICHNVVSCPVKLFDDTVGREYDGTLFAGQTVCEAERPGETGHPTVRPRSDWCMAVAVKE 930
            M AYN H +LV+ PDD+WLTILA FC YVNKNAE LRDRIV HEGKK L VE    L +A    +IR++LG IRQN+K PELADWF+PGF+TT   DEV AAATA+ S+QAYF Y I   CG+PSVTLMGTV DWKLLR KVERLL+FEV DNPE  VM+ WVGYLR+VCDGFVESAEHP S ETL+ WD+V+     GSG SYITGWL AF CF+ DG F+G NT   +I        + ++ G+  +P+I   +ICHN VSCPVK+ D+  G EYDGTLF GQ   EA   GE G+P  RPR+ WC+AV  KE
Sbjct:  174 MMAYNHHADLVLRPDDMWLTILAHFCLYVNKNAESLRDRIVNHEGKKVLRVEGGGNLFSAETPVLIREMLGKIRQNVKMPELADWFKPGFTTTANTDEVAAAATAITSLQAYFSYEIHLECGLPSVTLMGTVQDWKLLRAKVERLLDFEVKDNPEEDVMEVWVGYLREVCDGFVESAEHPDSTETLQVWDKVVPHIGGGSGVSYITGWLPAFACFNKDGKFMGRNTNKARIGLNRGGNAVRDESGECKYPLIDTGEICHNAVSCPVKINDN--GVEYDGTLFVGQVALEARNGGEGGYP--RPRNGWCLAVPAKE 484          
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F1_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 1.110e-112
Identity = 160/222 (72.07%), Postives = 183/222 (82.43%), Query Frame = 1
Query:    1 MTAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELIVESFEPLHTANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVCAAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEVDDNPEGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVITDERQGSGFSYITGWLSAFTCFDDDGDFL 666
            MTAYN H +LV+ PDDVWLTILAQFC YVNKNAE LRDRIV+HEGKK L VE    L + +Y  +IR++L  IR+NIK+PELADWF+PGF+TTT+ DEV AAATAMAS+QAYF Y I   CG+PSVTLMGTV DWKLLR KVERLL+FEV DNPEG VM+ WVGYLRKVCDGFVESAEHP S ETL+FWD+V++    GSG SYITGWLSAF CF+ DG F+
Sbjct:   40 MTAYNRHADLVLRPDDVWLTILAQFCLYVNKNAESLRDRIVDHEGKKALGVEGGGNLFSLDYPALIREMLAKIRENIKTPELADWFKPGFTTTTDTDEVAAAATAMASLQAYFSYEIHAECGLPSVTLMGTVQDWKLLRAKVERLLDFEVIDNPEGDVMEVWVGYLRKVCDGFVESAEHPDSTETLQFWDKVVSHIGGGSGVSYITGWLSAFACFNKDGKFM 261          
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL09_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 3.550e-105
Identity = 149/192 (77.60%), Postives = 169/192 (88.02%), Query Frame = 1
Query:    1 MTAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELIVESFEPLHTANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVCAAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEVDDNPEGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRV 576
            MTAYNTHC L +SPDDVWLTIL+QFCAYVNKNAE LRDR+VEHEGKK L VE +  L TA+YA++I+DLLG IRQNIKSPELADWFRPGFST+TE DEVCAAATAMAS+QAYF++ +   C IPSVTLMGTV DW+LLREK+ER+LEFEV DNPEGKVM+ WVGYLRKVCDGFVESAEHP S  T++FW +V
Sbjct:    1 MTAYNTHCALEVSPDDVWLTILSQFCAYVNKNAEGLRDRVVEHEGKKGLTVEGYGSLETADYAKLIKDLLGQIRQNIKSPELADWFRPGFSTSTETDEVCAAATAMASLQAYFEHTMCLACSIPSVTLMGTVEDWELLREKIERMLEFEVLDNPEGKVMEVWVGYLRKVCDGFVESAEHPDSAATVDFWAKV 192          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig825.16397.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.430e-19484.52protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.330e-18581.61protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.060e-15468.28protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FL08... [more]
Uncharacterized4.180e-14365.50protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.020e-13983.84protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.060e-13162.14protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.160e-13063.43protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.890e-12961.59protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.110e-11272.07protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.550e-10577.60protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig825contigE_fasciculatus_S2_contig825:9160..10440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score548.5
Seed ortholog evalue2e-153
Seed eggNOG ortholog2880.D8LB67
Model size933
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.Domain of unknown function (DUF4419)
EggNOG OGs29GQM@1,2RPX4@2759
Cds size933
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842485.3492303-CDS-E_fasciculatus_S2_contig825:9159..97321696842485.3492303-CDS-E_fasciculatus_S2_contig825:9159..9732Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig825 9160..9732 +
1696842485.3702476-CDS-E_fasciculatus_S2_contig825:10080..104401696842485.3702476-CDS-E_fasciculatus_S2_contig825:10080..10440Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig825 10081..10440 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig825.16397.1prot_E_fasciculatus_S2_contig825.16397.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig825 9160..10440 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig825.16397.1

>prot_E_fasciculatus_S2_contig825.16397.1 ID=prot_E_fasciculatus_S2_contig825.16397.1|Name=mRNA_E_fasciculatus_S2_contig825.16397.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=311bp
MTAYNTHCNLVISPDDVWLTILAQFCAYVNKNAEELRDRIVEHEGKKELI
VESFEPLHTANYARMIRDLLGLIRQNIKSPELADWFRPGFSTTTEKDEVC
AAATAMASMQAYFDYGIRGGCGIPSVTLMGTVGDWKLLREKVERLLEFEV
DDNPEGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRVITDERQGS
GFSYITGWLSAFTCFDDDGDFLGNNTKITFRDENWNLVEKVGDFPMIPGD
KICHNVVSCPVKLFDDTVGREYDGTLFAGQTVCEAERPGETGHPTVRPRS
DWCMAVAVKE*
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mRNA from alignment at E_fasciculatus_S2_contig825:9160..10440+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig825.16397.1 ID=mRNA_E_fasciculatus_S2_contig825.16397.1|Name=mRNA_E_fasciculatus_S2_contig825.16397.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1281bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig825:9160..10440+ (Ectocarpus fasciculatus EfasUO2)
ATGACCGCCTACAACACTCACTGCAACTTGGTGATCAGCCCTGACGACGT GTGGTTGACTATCCTCGCCCAGTTCTGCGCGTATGTGAACAAAAACGCGG AGGAACTACGAGACAGGATCGTCGAACACGAGGGCAAGAAGGAGCTCATA GTGGAAAGTTTTGAACCGCTCCATACCGCGAACTACGCGCGTATGATCAG GGATTTGTTGGGGCTAATCAGGCAGAACATCAAGTCGCCTGAACTCGCTG ACTGGTTCCGGCCGGGCTTCTCAACGACGACGGAGAAGGACGAGGTGTGC GCTGCGGCGACGGCGATGGCGAGCATGCAGGCGTACTTCGATTACGGCAT AAGGGGCGGGTGCGGCATTCCCTCGGTGACCCTAATGGGCACAGTGGGAG ACTGGAAGCTGCTCCGGGAGAAGGTCGAGCGCCTGCTCGAGTTCGAGGTG GACGACAATCCCGAGGGCAAGGTCATGCAGACATGGGTGGGGTACCTGCG CAAGGTGTGCGACGGGTTCGTGGAGTCAGCGGAGCATCCTGGGAGCCCGG AAACACTCGAGTTCTGGGACAGGGTACGTTGGAAATCGGCGCGTGCGTGC CGGGCGCAACAGTACATGGTGCATCGAACGTGATCCCTTGTTTCTAGCTT GCTGACATTGTTCTGTTGGGTCCGGTCCCTCTTTCGGGTGCAACGCCCGG AGCCCACTCGAATTCCAAATACCAAGGACACCTGCCACATTGGAATGCAT ACGAAACGCTCTCATGCACAATCTTTCTGTACATCACAGCAGTCTCAGCA TACCAGGTAGCCAGTCAATCTGGAGAAACATGTCGGTATATTTCCTGGGT GCTGTAGCAATGTTCCCACATAATCTCTTGTACACATGAACGGATACGTT TATGTTGCCTTCGTTCGTCAGGTTATCACAGATGAACGCCAGGGCTCGGG GTTCAGCTACATCACGGGCTGGCTTTCCGCTTTCACATGCTTCGACGATG ACGGCGACTTCCTCGGAAACAATACAAAGATCACGTTTAGGGACGAGAAC TGGAACCTCGTCGAGAAGGTCGGGGATTTTCCCATGATCCCCGGCGACAA GATCTGCCACAACGTGGTTTCGTGCCCCGTGAAACTATTTGATGACACCG TTGGGCGTGAGTATGATGGCACTCTTTTCGCAGGCCAAACCGTCTGTGAG GCGGAGAGGCCCGGAGAGACGGGGCACCCGACAGTACGCCCCCGAAGCGA CTGGTGCATGGCCGTGGCAGTCAAGGAGTAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig825:9160..10440+

>mRNA_E_fasciculatus_S2_contig825.16397.1 ID=mRNA_E_fasciculatus_S2_contig825.16397.1|Name=mRNA_E_fasciculatus_S2_contig825.16397.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=933bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig825:9160..10440+ (Ectocarpus fasciculatus EfasUO2)
ATGACCGCCTACAACACTCACTGCAACTTGGTGATCAGCCCTGACGACGT
GTGGTTGACTATCCTCGCCCAGTTCTGCGCGTATGTGAACAAAAACGCGG
AGGAACTACGAGACAGGATCGTCGAACACGAGGGCAAGAAGGAGCTCATA
GTGGAAAGTTTTGAACCGCTCCATACCGCGAACTACGCGCGTATGATCAG
GGATTTGTTGGGGCTAATCAGGCAGAACATCAAGTCGCCTGAACTCGCTG
ACTGGTTCCGGCCGGGCTTCTCAACGACGACGGAGAAGGACGAGGTGTGC
GCTGCGGCGACGGCGATGGCGAGCATGCAGGCGTACTTCGATTACGGCAT
AAGGGGCGGGTGCGGCATTCCCTCGGTGACCCTAATGGGCACAGTGGGAG
ACTGGAAGCTGCTCCGGGAGAAGGTCGAGCGCCTGCTCGAGTTCGAGGTG
GACGACAATCCCGAGGGCAAGGTCATGCAGACATGGGTGGGGTACCTGCG
CAAGGTGTGCGACGGGTTCGTGGAGTCAGCGGAGCATCCTGGGAGCCCGG
AAACACTCGAGTTCTGGGACAGGGTTATCACAGATGAACGCCAGGGCTCG
GGGTTCAGCTACATCACGGGCTGGCTTTCCGCTTTCACATGCTTCGACGA
TGACGGCGACTTCCTCGGAAACAATACAAAGATCACGTTTAGGGACGAGA
ACTGGAACCTCGTCGAGAAGGTCGGGGATTTTCCCATGATCCCCGGCGAC
AAGATCTGCCACAACGTGGTTTCGTGCCCCGTGAAACTATTTGATGACAC
CGTTGGGCGTGAGTATGATGGCACTCTTTTCGCAGGCCAAACCGTCTGTG
AGGCGGAGAGGCCCGGAGAGACGGGGCACCCGACAGTACGCCCCCGAAGC
GACTGGTGCATGGCCGTGGCAGTCAAGGAGTAG
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