mRNA_E_fasciculatus_S2_contig8240.16390.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8240.16390.1
Unique NamemRNA_E_fasciculatus_S2_contig8240.16390.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL67_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 2.180e-112
Identity = 192/240 (80.00%), Postives = 198/240 (82.50%), Query Frame = 3
Query:  189 YGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGKHGIIASKRXXXXXXXXXXXXXXGSTAAGIFLHRSSDSAIVSGNHVHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMGKLKEADTTSVTGNIFENAQVFEVDNSQETTMVDNTYPDTVEISVKNGACFVAGSDLGDELGTPC 908
            YGHLGGLW GNLMHDNEWYGFDPHDDSDYLTIHNNLVWNN          XXXXXXXXXXXXXX STAAGIFLHRSSDSAIV+GNH+HDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTY+GSNEPDVPPYTGYRPFGTSVQNNV STWHMGKLKEADTT++T                            VEISVKN ACFV+GSDLGDELGTPC
Sbjct:  435 YGHLGGLWNGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNXXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTSVQNNVFSTWHMGKLKEADTTTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEISVKNDACFVSGSDLGDELGTPC 674          
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Match: Mannuronan (C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 7.080e-91
Identity = 161/303 (53.14%), Postives = 194/303 (64.03%), Query Frame = 3
Query:    3 RMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDDVNTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGKHGIIASKRXXXXXXXXXXXXXXGSTAAGIFLHRSSDSAIVSGNHVHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMGKLKEADTTSVTGNIFE----NAQVFEVDNSQETTMVDNTYPDT--VEISVKNGACFVAGSDLGDE 893
            RMDI  SEIG+LGY+ +E+YGLTWKVRGFC DKSNPE+FDDVN YG+V DS+IHH+ +GLYTYGH  G W  N MHDN  YGFDPHDDSD+LTIH+N V+NNG HGIIASKR                T+AGIFLHRSSD AIV GN+VHD  D+GLA LESF+   S N  E  KYGVR S+G  +NV   NT S+ + Y  ++Y+G++EPDV   +G        QN+        K+KEAD T    N+FE    +  V   DN+ E  M  NT  D    E+ V N ACF   +D G E
Sbjct:  204 RMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVS-SGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYE 505          
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 1.680e-89
Identity = 161/303 (53.14%), Postives = 193/303 (63.70%), Query Frame = 3
Query:    3 RMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDDVNTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGKHGIIASKRXXXXXXXXXXXXXXGSTAAGIFLHRSSDSAIVSGNHVHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMGKLKEADTTSVTGNIFE----NAQVFEVDNSQETTMVDNTYPDT--VEISVKNGACFVAGSDLGDE 893
            RMDI  SEIG+LG+  +E+YGLTWKVRGFC DKSNPEIFDDVN YG++ DS+IHHL +GLYTYGH  G W  N MHDN  YGFDPHDDSD+LTIH+N V+NNG HGIIASKR                T+AGIFLHRSSD AIV GN+VHD  D+GLA LESF+   S N  E  KYGVR+S+G  +NV   N  S+ S Y  +TY+GS+EPDV   +G        QN+        K+KEAD T    N+FE    +  V   D++  + M  NT  D    E+ V N +CF   SD G E
Sbjct:  208 RMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVS-SGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYE 509          
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Match: Mannuronan (C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 3.520e-87
Identity = 150/297 (50.51%), Postives = 188/297 (63.30%), Query Frame = 3
Query:    3 RMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDDVNTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGKHGIIASKRXXXXXXXXXXXXXXGSTAAGIFLHRSSDSAIVSGNHVHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMGKLKEADTTSVTGNIFENAQVFEVDNSQETTMVDNTYPDTVEISVKNGACFVAGSDLGDE 893
            RMDI  SE+ +LGY+G E YGLTWKVRGFC DK NPE+FDDVN YG++ DS+IHH  +G+YTYGH  G W  N MHDN  YGFDPHDDSD+LTIH+N VWNNG HGIIASKR               S +AGIFLHRSSD+ IV GN+VHD  D+GLA LESF+   S+N  E  KYGVRLS+G G N+   N  +  + +  F+Y+G+++P+V   +G       ++NN+I       LKEAD T    N F++A      ++ +T M  NT      + V  GA F   SD G E
Sbjct:  175 RMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVD-SGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATFDESSDHGFE 470          
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Match: Mannuronan (C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 5.760e-84
Identity = 148/277 (53.43%), Postives = 182/277 (65.70%), Query Frame = 3
Query:    3 RMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDDVNTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGKHGIIASKRXXXXXXXXXXXXXXGSTAAGIFLHRSSDSAIVSGNHVHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMG-KLKEADTTSVTGNIFENAQVFEVDNSQETTMVDNTYPD 830
            RMDI+ SEI +LGY+ +E+YG+TWKVRGFC D SNPE+F+  N YGD+  S+IHHL+YG Y+YGH GG+WT N MHDN  YGFDPHDDSDYLTI  N V+NN  HGIIASKR              G+ AAGIFLHRSSD A V  N + +MQD+G+A LESFD     N+I   KYG+R+SLG+GNN VY N+F+D+S YG +TY GS+EPDV   +  RP G  +  N++    +G K+KE D      N F N   FE   S  T    N   D
Sbjct:  591 RMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDV---SDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGD 864          
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 1.580e-83
Identity = 142/296 (47.97%), Postives = 189/296 (63.85%), Query Frame = 3
Query:    3 RMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDDVNTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGKHGIIASKRXXXXXXXXXXXXXXGSTAAGIFLHRSSDSAIVSGNHVHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMG-KLKEADTTSVTGNIFENAQVFEVDNSQETTMVDNTYP-DTVEISVKNGACFVAGSDL 884
            RMDI+ SE+G+LGY  +EAYG+TWKVRGFC+D SNP++FDDVN YGD+  S+IHH++YG+Y++GH GG+WT NLMHDN  YGFDPHDDSDYL I  N V+NN  HGIIASKR              G+ AAGIFLHRS D + V GN + +M D+G+A LE+      +N ++  ++G+R+ LG+ NN V+ N F ++ + G FTYVGS+EP V    G RP      NN I     G K+KE+D  S+T N F      E +N+ +     N+ P +T    + N + F   S L
Sbjct:  151 RMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVG---GGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGL 443          
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Match: Mannuronan (C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 6.400e-83
Identity = 154/293 (52.56%), Postives = 191/293 (65.19%), Query Frame = 3
Query:    3 RMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDDVNTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGKHGIIASKRXXXXXXXXXXXXXXGSTAAGIFLHRSSDSAIVSGNHVHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMGKLKEADTTSVTGNIFENAQVFEVDNSQETTMVDNTYPDTVEISVKNGACFVAGSD 881
            RMDI  SE+ +LGY G+E+YGLTWKVRGFC D SNPE+FD+VN YG++ DS+IHH  +G+YTYGH  G W  N MH N  YGFDPHDDSD+LTIH+N V+NNG HGIIASKR   XXXXXXXXXX  S + GIFLHRSSD AIV  N+  D  D+G+A +ESF+   SNN  E  KYGVR+S+G  +NV   N  SD S Y  +TY GS++P V   +G         N +       KL  AD T    N F++A+    +++Q+T M  NT   +  + V  GACF   SD
Sbjct:   27 RMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVD-SGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLGSATLKVSKGACFDKKSD 318          
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Match: MEP4b (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D5_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 1.600e-79
Identity = 131/281 (46.62%), Postives = 176/281 (62.63%), Query Frame = 3
Query:   27 IGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDDVNTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGKHGIIASKRXXXXXXXXXXXXXXGSTAAGIFLHRSSDSAIVSGNHVHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMGKLKEADTTSVTGNIFENAQVFEVDNSQETTMVDNT-YPDTVEISVKNGACF 866
            +G++G++ +E+YGLTWKVRGFC DKSNPEIFD VN YG++ DS +HH+ + +YTYGH  G W  N++H N  YG+DPHDDSD+LTIH+N+V++N  HGIIASKR                T+AGIFLHRSSD A+V  NH +   D+G+A LES +   S N+ E  KYG+R+S+G  +N VY NT ++ S Y  +TY GS+  +V P TG         N V+      KLKE+D T +T N+F    V E  N+ E  +  N    D  E+ +   ACF
Sbjct:    1 MGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNVVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVYNNTMTNTSQYAIYTYQGSDPAEVQP-TGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGVVEFSNTTENVVTGNVGLEDATEVELVEPACF 280          
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 8.870e-79
Identity = 135/289 (46.71%), Postives = 181/289 (62.63%), Query Frame = 3
Query:    3 RMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDDVNTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGKHGIIASKRXXXXXXXXXXXXXXGSTAAGIFLHRSSDSAIVSGNHVHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMGKLKEADTTSVTGNIFENAQVFEVDNSQETTMVDNT-YPDTVEISVKNGACF 866
            RMDIV SE+G++G++ +E+YGLTWKVRGFC DKSNPE+FD VN YG++ DS +HH+ + +YTYGH  G W  N +H N  YG+DPHDDSD+LTIH+N+V++N  HGIIASKR                T+AGIFLHRSSD A+V  NH +   D+G+A LES +   S N+ E  KYG+R+S+G  +N V  NT ++ S Y  +TY GS+  +V P TG         N V+      KLKE+D T +T N+F    + E  N+ E  +  N    D  E+ +   ACF
Sbjct:  293 RMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQP-TGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580          
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 3.290e-78
Identity = 138/297 (46.46%), Postives = 185/297 (62.29%), Query Frame = 3
Query:    3 RMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDDVNTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGKHGIIASKRXXXXXXXXXXXXXXGSTAAGIFLHRSSDSAIVSGNHVHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMGKLKEADTTSVTGNIFENAQVFEVDNSQETTMVDNTYPDTVEISVKNGACFVAGSDLGDE 893
            RMDI  SE+G+LGY+G+E+YGLTWKVRGFC DKSN ++F+DVN YG++ DS+IHH  +G+YTYGH  G W  N MHDN  YGFDPHDDSD+LTIH+N V++NG HGIIASKR               +++AGIFLHR                D+GLA +ESF+   S+N+ E  KYG+R S+G+G NV + N  S  + Y  ++Y+GS+ PDV   +G        +NN+I      KL +AD T    N FE+A     +++++T M  N   +  ++ V NGA F A SD G E
Sbjct:  201 RMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVD-SGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASFDASSDYGFE 496          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8240.16390.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Mannuronan2.180e-11280.00C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Mannuronan7.080e-9153.14C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID... [more]
Mannuronan1.680e-8953.14C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Mannuronan3.520e-8750.51C-5-epimerase (Fragment) n=1 Tax=Laminaria digitat... [more]
Mannuronan5.760e-8453.43C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus Tax... [more]
Mannuronan1.580e-8347.97C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Mannuronan6.400e-8352.56C-5-epimerase (Fragment) n=1 Tax=Laminaria digitat... [more]
MEP4b1.600e-7946.62protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Mannuronan8.870e-7946.71C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Mannuronan3.290e-7846.46C-5-epimerase n=1 Tax=Laminaria digitata TaxID=803... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8240contigE_fasciculatus_S2_contig8240:199..5406 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score294.7
Seed ortholog evalue5e-77
Seed eggNOG ortholog2880.D8LC73
Model size1983
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
Cds size906
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8240.16390.1prot_E_fasciculatus_S2_contig8240.16390.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8240 204..4334 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842484.7055871-UTR-E_fasciculatus_S2_contig8240:198..2031696842484.7055871-UTR-E_fasciculatus_S2_contig8240:198..203Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8240 199..203 +
1696842484.8327065-UTR-E_fasciculatus_S2_contig8240:4334..54061696842484.8327065-UTR-E_fasciculatus_S2_contig8240:4334..5406Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8240 4335..5406 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842484.7192788-CDS-E_fasciculatus_S2_contig8240:203..2751696842484.7192788-CDS-E_fasciculatus_S2_contig8240:203..275Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8240 204..275 +
1696842484.729984-CDS-E_fasciculatus_S2_contig8240:528..6381696842484.729984-CDS-E_fasciculatus_S2_contig8240:528..638Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8240 529..638 +
1696842484.7439978-CDS-E_fasciculatus_S2_contig8240:886..9401696842484.7439978-CDS-E_fasciculatus_S2_contig8240:886..940Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8240 887..940 +
1696842484.7589078-CDS-E_fasciculatus_S2_contig8240:1348..14031696842484.7589078-CDS-E_fasciculatus_S2_contig8240:1348..1403Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8240 1349..1403 +
1696842484.7700906-CDS-E_fasciculatus_S2_contig8240:1894..19221696842484.7700906-CDS-E_fasciculatus_S2_contig8240:1894..1922Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8240 1895..1922 +
1696842484.780374-CDS-E_fasciculatus_S2_contig8240:2262..23991696842484.780374-CDS-E_fasciculatus_S2_contig8240:2262..2399Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8240 2263..2399 +
1696842484.7911348-CDS-E_fasciculatus_S2_contig8240:2959..30991696842484.7911348-CDS-E_fasciculatus_S2_contig8240:2959..3099Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8240 2960..3099 +
1696842484.8015914-CDS-E_fasciculatus_S2_contig8240:3511..36601696842484.8015914-CDS-E_fasciculatus_S2_contig8240:3511..3660Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8240 3512..3660 +
1696842484.8123138-CDS-E_fasciculatus_S2_contig8240:4173..43341696842484.8123138-CDS-E_fasciculatus_S2_contig8240:4173..4334Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8240 4174..4334 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8240.16390.1

>prot_E_fasciculatus_S2_contig8240.16390.1 ID=prot_E_fasciculatus_S2_contig8240.16390.1|Name=mRNA_E_fasciculatus_S2_contig8240.16390.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=302bp
MDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDDVNTYGDVIDS
NIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWN
NGKHGIIASKRCNHVSIQNNEVWDGGSTAAGIFLHRSSDSAIVSGNHVHD
MQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSY
GFFTYVGSNEPDVPPYTGYRPFGTSVQNNVISTWHMGKLKEADTTSVTGN
IFENAQVFEVDNSQETTMVDNTYPDTVEISVKNGACFVAGSDLGDELGTP
C*
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mRNA from alignment at E_fasciculatus_S2_contig8240:199..5406+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8240.16390.1 ID=mRNA_E_fasciculatus_S2_contig8240.16390.1|Name=mRNA_E_fasciculatus_S2_contig8240.16390.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5208bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8240:199..5406+ (Ectocarpus fasciculatus EfasUO2)
GCCGAATGGACATCGTCAGGTCCGAGATCGGCTGGCTGGGATACTACGGC GCCGAGGCGTACGGTCTGACGTGGAAGGTGAGTAATGTGGGGGGGGGAAC GGGCGCGTACTCTCATGTTTTGCTTGCCTTTGCTGATTGGGAATTGACGA CGGGTCCTCAAGGTGAATACGGGTGGACGGTTTTGTTGTAAAAAATTGTG CCACGAGAAGAGACACGCCTCCCTGGAACACGAAAAAACACGCCTCCACT GCACCACGAAACCATAACGTCTCCCTCTACCCCTCCCCCACTAAAATATA AAATATGTCTCCCTCCCTTTCTTCCTCCAGGTGCGAGGGTTCTGCACGGA CAAGAGCAACCCCGAGATCTTCGACGATGTGAACACCTACGGCGACGTGA TCGACAGCAACATCCACCACCTCTTCTACGGGCTCTACACGTGAGTGCTG TGACGCTCCTCGGGGGGCTACGCATGTAGGCCATGTATGCCCGAGAGGGA TCTACTATTTTCGGGTCTCAGCCCCTCCTCGCAAAAGAAAAAAAAATGAA AAAAATGCCCGACAGAAGCTCGACACTCGTTACTGTTGCACGCGCCTTTC CCATCTTTGGGAGAGAGCTATGTACACGAAGAAATTTTACCATCGGGTCT GCATTTTTGTCCATCTTGCGCTTTTCCTTTCGCCACAGGTACGGCCACCT CGGAGGACTGTGGACCGGTAACCTCATGCACGACAACGAGTGGTGAGAGA CATGTGCCGACACAGCAGTACGTCCCAACACGGCGTCATGTTGCCCATCA AGACCCCGCGAAGGCTTGTTGTACCCTCCCACACACACACCACAACTATC GGGAGGAGGAAGCCCGACCAATCGTCGATAACGCCGCTCGGTCATCGACA ACGCCTATTTGCATTTGTGTCGTGGTATACATGCGCAAGGCGCTCAACTA CCGTATAACGTATACCGTATCGGACGACCCGCACCAACACGTTCCCGCCG AAGGCAGAACGTTGTACACAAAACGTACAGCTGCCTGCCTGTAGCGTTGT TTTTTTGTTGCATCGCGATCGTTTGTTTCGTTCCCACCAACATTCTCCAC GCTCCGTTTAATACACTGCCGCGCCGTTGCTTGTGCTATGGATGCCATAG GTACGGCTTCGACCCCCACGACGACAGCGACTACCTCACCATCCACAACA ACCTGGTGAGTCCAGACGTTGTTACATCGACCGCTTAGAAAGAAGAACCG CATGTATGTCAAGAGTGAGACATCAAGGGAATCGAGCAGGTGATCAAAAA ATAATGACGCGAAAAATTGATCTGTGGAGGAGATTCCACAAGCGGGACAG TAGTAGATACGCTGGTTTGCGATCACGCCGGTTCCGTGTGCGGAATGCGA CTAATTCCAAGCCTGAGTTGTCTTGACTGGAACCATCTGCGTACATATGA GATTGACGAGAACGTCCTAAGATAGAGGGCTTTAATTTGGTCGTCGTTGT TGTCTTTTCCGTTCTTGATGTACTTGTGTTGTGGCTGTCGCCGACACTGT GGTTCTCATGTTAGGGATAACTCGGGTTCGATCCTAAAATCTCGACGATG CTATCGAGACAGTCCTCTCACCAAAGCCCCCCCCGTCCTTCCGCCTGATT CTCCCCCTTTGCTCTCCACGACAATACAATAAAAAAAAACGGTCAGGTCT GGAACAACGGCAAGCACGGAATCAGTGAGTCTTGACAATGAAGCTATTTT TTTTTTCTGTTTTCGTGTTTTTCGCTGTTTCTGTTGCCGTTGTGGAGGTC CCCTTGGAACGAAAGTAAACCTGACACGAAGTTCTTGTTGGTTGCGTTTA GCGTTGCTGTTGTTTCTGTCGCCAGCATGTTTTTTTTTGCGGGACGGGAA CCACGTCGAATGCGTACTACCCCGCAAACAACCACATCATAACTGTCGTT GTACATACATGACGTAGACCTCTGAGCAAGAAAACAGACGGGCGTAAATC TAACTCTCCTCCGTCTCTTTTCCATGCCTCTAACCCTCCGCTTATTTCTG CTCGTGTTTTGTAGTCGCCTCGAAGAGGTGCAACCACGTGAGCATCCAGA ACAACGAGGTCTGGGACGGCGGCTCCACCGCGGCAGGCATCTTCCTCCAC CGTAGCTCGGACTCGGCCATTGTGTCTGGGAACCACGTCCACGACATGCA GGTGTGTGCGTGTGTGTGTTGATCATTAACATCGACCGCGCTAACCGGCT GACCAATGAAAAGATATCAGTCTTAGCGTGGTTTTTGTGTGTGTGAAGGA ATGATTGGTGTGGTCCTGAGATTATTTGCGGCAGGGGGTCGTGGTGGGCG ACGTACGTTCGCCTGAATGCGGGTTGCGTTTCTTAAGCCTCGAAGGGGAG GTAGGGGGAGGTGTACTCAGTATCATGCATGCCGTAGTCGTTAGACCATA GACCTCGCAGAAGGGGAGGGGGGGTGCACTTGATTCTGTTCCTCGCTCTC ACGATGAAGTCACCTAAATGACACCCGTGTCCCGAGTGACAAGTTGGGCC GTAAGAAGCTAACCCTCCGAACCTGTGTCGTGCCGTACCAAACGTCTAGA TAGTCTATTTGTAATCCTATTGGCGTAGCATGATTCTTTCCACAACGCTG CTGCGTCGTGTGGTACTGCTGTAGAACGCAAACTTCGCGACCACCGAACA ACTCTTCCCCTGTTTTCTCGCGGTTGTGCGTCCGTGCTAATCCGCCGCAC GCCGACGACAGGACTCCGGCCTCGCCACCCTGGAGTCTTTCGACATCCTC TTCTCCAACAACCTCATCGAGCGCTGCAAGTACGGTGTGCGCCTCTCTCT CGGCGCCGGCAACAACGTCGTCTACGGCAACACCTTCTCGGACCTCAGCA GGTACTACAATACACCAACTCGATGATGCTGCCTGCGTCTCGCCGAAGCC TGCCTGTGCTGCAGCAGCATTAGTGTTGTGCGTTGTCATTCATGCTGTTG TTGTTGTTGTCATTCATGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCTTCACATTAAA AACCGGTCTCCGTTCAGCACCTTCTAATGTCCGTGCTGGTCCAACTCACG CGTATCCAACCCAAATGGTAAAAGTCTACAGAACGGCTAAATAGTCGAGG GTGCTCCACGGAGCGACACCCTTGTTCTGCCTGTGTTCCGCGTACTCTTC TCGCCCCCACCGCCTTCTCTCAAACCCGTCCGTTTCTCGGAAACCTGTTG CCGTCCGCTACAGCTACGGGTTCTTCACGTACGTCGGGAGCAACGAGCCG GACGTCCCGCCCTACACCGGGTACAGGCCTTTCGGCACCAGCGTCCAGAA CAACGTCATCAGCACGTGGCACATGGGCAAGCTGAAGGAGGCCGACACCA CCAGCGTCACCGGTGGGTGCAGGGTCATGAGTCGTTGTCGTTGTTGTTGT TGTTGCCTTCATATCAAACAACCGTTCCGGTCTCCGCTCGGTACCTTCTA ACTAAATATCCGTACTGATGCAACTGATACGGACGCCTCGCGTGATCACC AGAGTTCGGTTCGGTTTTCCTGTTGGGTACTGTTTGGCGGTTGTACAGTC TAACACGTGTTATACTTTATCGCTTGTTGTCCTTGCTGTTACCACCTCCG TCCTACCGAGCTTTACCCTGCGTGTATATATTGTTACTGCTGTGGTCTTT GGTCCTTACAGCTACATTAGTCACACGAATACCTGAGCCAAGAAGAGCAA TGGGAGTACGTAGGCCATTCATGAGGATTCCATGAGAATCTTCGGTAGGT TGATCATTGGAAAGAGACACCACCAGCAAAAGTCTCATAACAGAACAGAA TCAACTGCCAATAATAACAAAAAAAAAATTAAACCAAACACACCCGCGCC TGAAACACAACTACTGTAACAACAGGCAACATCTTCGAGAACGCTCAGGT GTTCGAGGTCGACAACTCGCAGGAGACGACCATGGTCGACAACACCTACC CGGACACCGTGGAGATCTCCGTCAAGAACGGCGCTTGCTTCGTGGCTGGG TCGGACCTCGGGGATGAGCTCGGCACCCCTTGCTAATAGACAAACAGAGC CCCGTTCGTTTGTCCGGTGACGGTCGAACGTCTTGGTTTTGTGTTACCTG CATGTAGCTACAAAGTTGATCCTCGCGCCGCGGGGGGCGTGCTCAACGGC TGGCTGTGATTGACCCTTACCTTAGACTGTTATTATTGTGGAGTTTGTTT TGTGGGTGGGGGCGCGTGAAGAGAGGTAAGCATGCGTCTTATGGGATATT CTATTGGTCATCTTGTCCCGCCCCCGAAACAAGCGGTGTATGTCCGAAAT TAGCTAGGCAATAAGCCGAAAAATGAAAGATACTTCAGAATGTCCGACCA GGACACCAAAGCAACGGTCTCGGTTTTGGTTGTATAGAGGAGAGGGCGCT TGGGTAGAAGTCTTGTTTTTGGTACTTGGGAGAGAACGCTGTATCATTGG TGCTCCGTACGTCTCGCGGCGCCGCCCACCGAACGCCCCCTCTCTCCCAA CTAGAGTCGTACGCCCTGTTGGGCAACCTTCCTGCTGTGTCCCTCCCCCC AGCATGTGGAAAAACCTTTTGTGCTGTGTGAAGTTCGTAACGCATGCAAG CGCCTTGTGCCCTTGCAGCTGTTTTGCACGCTTGGTTGGTTGTTCGACAC AAAACACGACACCCTAGCGCGTTATATTTTGTGGTGGTTGAGGAAAACAA ATAAGCGCGCGGTAGATCGGCTCACTTGTTCGTCGTGCTCCAGTAGAAAC AGGAGTTCCCTCTCTTCTACTACTATCCCGACGTTGGTGGGATGGTGGCT CGCTTGCGAGCAACGTACTTGTTGTAACATAATTGTCCTTCCACGTTGTC GGTAGACTAGGTAGTGTTTCCTTTTGAAGTAATAGGCAGAAAGGAACGTC GTGTTCTCTTGTTGAAGTGCTATGCTGAAGGGAACATTTTGATGTCTGTT CGACGTGGTGTTTTTTTACCTAGAATTTGCTAAGAGTGTCGTCCGTCTCC CCAATGAAAGATGCTTTCAAGCATGTTTTTGTTCCTGAAAATACGGTGTT CGAGCCCAGCATAGACGCTGGATGACGACCTCACTCGCCCAAACACAAAG AGGAGTGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8240:199..5406+

>mRNA_E_fasciculatus_S2_contig8240.16390.1 ID=mRNA_E_fasciculatus_S2_contig8240.16390.1|Name=mRNA_E_fasciculatus_S2_contig8240.16390.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=906bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8240:199..5406+ (Ectocarpus fasciculatus EfasUO2)
ATGGACATCGTCAGGTCCGAGATCGGCTGGCTGGGATACTACGGCGCCGA
GGCGTACGGTCTGACGTGGAAGGTGCGAGGGTTCTGCACGGACAAGAGCA
ACCCCGAGATCTTCGACGATGTGAACACCTACGGCGACGTGATCGACAGC
AACATCCACCACCTCTTCTACGGGCTCTACACGTACGGCCACCTCGGAGG
ACTGTGGACCGGTAACCTCATGCACGACAACGAGTGGTACGGCTTCGACC
CCCACGACGACAGCGACTACCTCACCATCCACAACAACCTGGTCTGGAAC
AACGGCAAGCACGGAATCATCGCCTCGAAGAGGTGCAACCACGTGAGCAT
CCAGAACAACGAGGTCTGGGACGGCGGCTCCACCGCGGCAGGCATCTTCC
TCCACCGTAGCTCGGACTCGGCCATTGTGTCTGGGAACCACGTCCACGAC
ATGCAGGACTCCGGCCTCGCCACCCTGGAGTCTTTCGACATCCTCTTCTC
CAACAACCTCATCGAGCGCTGCAAGTACGGTGTGCGCCTCTCTCTCGGCG
CCGGCAACAACGTCGTCTACGGCAACACCTTCTCGGACCTCAGCAGCTAC
GGGTTCTTCACGTACGTCGGGAGCAACGAGCCGGACGTCCCGCCCTACAC
CGGGTACAGGCCTTTCGGCACCAGCGTCCAGAACAACGTCATCAGCACGT
GGCACATGGGCAAGCTGAAGGAGGCCGACACCACCAGCGTCACCGGCAAC
ATCTTCGAGAACGCTCAGGTGTTCGAGGTCGACAACTCGCAGGAGACGAC
CATGGTCGACAACACCTACCCGGACACCGTGGAGATCTCCGTCAAGAACG
GCGCTTGCTTCGTGGCTGGGTCGGACCTCGGGGATGAGCTCGGCACCCCT
TGCTAA
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