mRNA_E_fasciculatus_S2_contig822.16373.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY36_ECTSI) HSP 1 Score: 541 bits (1394), Expect = 1.130e-189 Identity = 266/324 (82.10%), Postives = 274/324 (84.57%), Query Frame = 1
Query: 547 IFTPS----------VENLVEAVAAKFKHETTASLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQKGAVDEDGGEFRLGYASACRRRSNSVLLQCLTDAGFTTESTCFFCSVQ 1488
+FTPS VENLV AVAAKFK E TASLPLHVLQ DFREAAEGDGLWREAY+ERFPV + AGQGGPDAGGGGCGPVD REA ATKPTASG NSS DEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWE KWDEWV+RDRLRWGNE LAAPLKG PLQAGDAVEVWCKGLHVPGAWLEAVV+EVEKERVYLGEVLTSGHFWA+TEHVRLIQKG VD+DGGEFRLGY SACRRRSNSVLLQCLTDAGFTTESTC +CSVQ
Sbjct: 33 LFTPSLPPFLSLYSTVENLVVAVAAKFKQEVTASLPLHVLQ-------------------DFREAAEGDGLWREAYDERFPVLQSETSESAGQGGPDAGGGGCGPVDCREATATKPTASGRNSSTGDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWEPKWDEWVVRDRLRWGNEHLAAPLKGIPLQAGDAVEVWCKGLHVPGAWLEAVVYEVEKERVYLGEVLTSGHFWARTEHVRLIQKGPVDDDGGEFRLGYTSACRRRSNSVLLQCLTDAGFTTESTCCYCSVQ 337
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Tudor-knot (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI68_9STRA) HSP 1 Score: 214 bits (546), Expect = 3.260e-63 Identity = 112/257 (43.58%), Postives = 146/257 (56.81%), Query Frame = 1
Query: 652 FISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQKGAVDEDGGEFRLGYASACRRRSNSV 1422
F+SL + G L +S+ +R+ +E D LWRE Y+ RF + + G+ +AA T P + K + RRLL P VGD V+VAW+GKFRLESLEV+ G AWWLA VV + + YKVHYPGWE +WDEWV R+RLRWGN+ AA L G P++ GD VEVWC G+HVPGAWLE V + +R YLG++L +G F RL++K + G E RRRS +V
Sbjct: 3 FLSLPELGTLARLSKSWRQLSEHDYLWREPYKARFKISDSLLAAGS------------------DAAVTPPLS--------------CKEAFARRLLHPQVGDRVEVAWRGKFRLESLEVFSGLAWWLADVVARSDDCRRYKVHYPGWEPRWDEWVSRERLRWGNDARAARLLGHPVEVGDTVEVWCGGVHVPGAWLEGRVSCIRSDRAYLGDMLAAGTFSIPLARCRLVRKAELMARGEE----EGETVRRRSLNV 223
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: F-box (domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T606_9STRA) HSP 1 Score: 211 bits (537), Expect = 2.000e-59 Identity = 123/355 (34.65%), Postives = 175/355 (49.30%), Query Frame = 1
Query: 370 GPAWTVALCALWGCRDIQGLKASLHVTGRVVLDLLPWELSKAFV------------DYERAIKEKRANFTHIFTPSVENL-VEAVAAKFKHETTASLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQKGAVDEDGGEFRLGYAS 1395
G WT A+ L+ +D + + L + L +L KA V D E A+ EK+ ++F P V L +E +A F + LP VL + F+S+S+ G+ +V Q ++E + +W+ Y +RF + G G P + ++ ++ RLLDPHVGD V+VAWKGKFRLES+++Y G AWW A VV+KGE YK+HYPGW+S+WDEWV RDRLRW E+ + D VE+WC G +VPGAWLEA V +V+ + +G VL+SG W E VR+ KG G + + S
Sbjct: 104 GAGWTRAIVDLYNAQDPEQMIRCLQEIQSL---LRTQKLGKAGVAKEQQQSKFCKKDLEAALNEKKKKNPNLFIPDVRRLSLEVMAEFFDKDRVNKLPSAVLIYTASFMSISELGMAASVCQQWKETVQSVAVWKPLYIKRFHFLHSPDDASTGIGLPLS----------------------------------YQALFRARLLDPHVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVARDRLRWTVEQDL----NKRIMPNDDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSGALWVNRERVRISPKGGARSLGKQGASNFFS 417
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT0_9STRA) HSP 1 Score: 206 bits (523), Expect = 3.140e-59 Identity = 115/285 (40.35%), Postives = 151/285 (52.98%), Query Frame = 1
Query: 562 VENLVEAVAAKFKH-----ETTASLPLHVLQFVLGFISLSDNG-VLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQKGAVDEDGGEFRLGYASA 1398
V + EAVA H E ASLP + + F++L + G +C VS+ +R+ E + LWRE Y RF + + +E A P K + RRL+ P VGD V+VAW+GKFRLESLE+Y+G AWWLA +V+ YKVHYPGWE++WDE+V R+RLRWGN+R AA L+ + GD VE+WC G +VPGAWLE V + ERV+LG+V+ G F E RL+ KGA E R A A
Sbjct: 8 VYKVEEAVAVITSHLLRSSEPAASLPPGLFLDIAQFLTLEERGKAVCCVSRKWRQLGEHNHLWREPYLTRFKFHSPQEDLAT-------------HTEAQELAQPGPK---------------VKDLFARRLVRPQVGDRVEVAWRGKFRLESLEIYNGLAWWLAEIVECDADGQRYKVHYPGWEARWDEFVPRERLRWGNDRRAAQLRDERIAVGDMVEIWCGGTNVPGAWLEGRVSSIRGERVFLGDVVAEGFFSVTEERCRLVSKGASAPPQSEGRSDTARA 264
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: F-box (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D060_9STRA) HSP 1 Score: 194 bits (494), Expect = 8.870e-55 Identity = 103/272 (37.87%), Postives = 145/272 (53.31%), Query Frame = 1
Query: 502 DYERAIKEKRANFTHIFTPSVENL-VEAVAAKFKHETTASLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFW 1314
D E A+ EK+ + +F P V L +E +A F + LP VL + F+S+S+ G+ +V Q ++E + +W+ Y +RF + G G P + + ++ RLLDP+VGD V+VAWKGKFRLES+++Y G AWW A VV+KGE YK+HYPGW+S+WDEWV RDRLRW E+ + D VE+WC G +VPGAWLEA V +V+ + +G VL+SG W
Sbjct: 35 DLEAALNEKKKKNSILFIPDVRRLSLEVMAEFFDKDRVNKLPSAVLIYTASFMSISELGMAASVCQQWKETVQSGAVWKPLYIKRFHFLHSPDDASTGIGLPVS----------------------------------YHALFRARLLDPYVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVPRDRLRWTVEQDL----NKRIMPNDDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSGALW 268
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A403_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.890e-49 Identity = 104/256 (40.62%), Postives = 136/256 (53.12%), Query Frame = 1
Query: 616 SLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDK------GEKPG----------YYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVR 1335
+LP + L F+ ++ + L TVS+D+ + D LWR+ Y RF GG D G G +++DE D +K YK+RL DPHVGD+V+VAW+GKFRLESLE+Y GTAWW+A VVDK PG +YKV +PGWE +WDEWV RDRLRW R + L+ D VEVWC +VPGAWLEA V ++ + V +G VL++G W VR
Sbjct: 96 TLPRDTMLLCLSFLDVTAHTTLSTVSRDWLSLSSEDALWRDHYLNRF------------SGGSDEGDG---------------------ETSADEYED-YKQEYKQRLEDPHVGDDVEVAWRGKFRLESLEIYRGTAWWVAVVVDKVALDAASGSPGRGRKIHAAKAWYKVTFPGWEGRWDEWVSRDRLRW---RAKNTQEADALKPRDFVEVWCGSQNVPGAWLEASVQKIRGDAVEVGRVLSTGSLWVDRSRVR 314
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SC81_9STRA) HSP 1 Score: 160 bits (404), Expect = 4.220e-41 Identity = 100/277 (36.10%), Postives = 133/277 (48.01%), Query Frame = 1
Query: 571 LVEAVAAKFKHETTASLPLHVLQ-FVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGE----------------KPGYYKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQA-GDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQK 1347
LV V + + A LP +L+ VL + + + + VS+ R AA D WR Y RF + E D G +RE+ +++RL DP GD V++AW+G+FRLE LEVY G AWW A VV+K + + YKVHY W+++WDEWV RD+LRW P T + A GD VEVWC G VPGAWL AVV VE E +G+V +SG W + + VRLIQ+
Sbjct: 70 LVSLVIHYYPPDRLAGLPRELLEDAVLANLDVKNLAAMAAVSRAARRAASSDAAWRPQYARRFGAADDASEHF------DFG------ASLRES-------------------------FRQRLGDPAPGDRVEIAWRGRFRLEGLEVYRGLAWWAAEVVEKRDAXXXXXXAPDCPLDDRRARKYKVHYVHWDARWDEWVARDQLRW-----PVPEGRTGVVASGDDVEVWCSGSAVPGAWLRAVVTAVEGELYCVGDVASSGRLWVRRDRVRLIQR 304
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: F-box (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI95_ECTSI) HSP 1 Score: 159 bits (401), Expect = 5.200e-41 Identity = 94/250 (37.60%), Postives = 132/250 (52.80%), Query Frame = 1
Query: 613 ASLPLHVLQFVLGFISLSDNGVLCTVSQDFREAAEGDGLWREAYEERFPVQIEMCEKGAGQGGPDAGGGGCGPVDIREAAATKPTASGGNSSASDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGY-YKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGH--FWAKTEHVRLIQKGA 1353
A LP +L + +++ D G +C V++D+R AAE D +WR + RF RE P G + A K ++ RL DP VGD+V+V+W+G+FRLESL+V+ G +WW A VV K + G+ YK+HYPGW+S WDEWV+RDRLRW + T + + VEVWC G HV GAWL+A V ++++++V L VL S W VR + GA
Sbjct: 27 AGLPRELLARSMELLNMVDLGQVCCVNKDWRNAAEEDAVWRFWWARRF----------------------------RE----DPPPQRGRARAGH-----LKQLHRYRLEDPLVGDKVEVSWEGRFRLESLDVFVGRSWWEATVVQKMD--GFKYKIHYPGWDSNWDEWVVRDRLRWP---VDPSYLSTTFRVREVVEVWCTGTHVKGAWLQARVRQIKQDQVSLKNVLASSPRTVWVPRSKVRRVCTGA 234
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXB7_9STRA) HSP 1 Score: 103 bits (258), Expect = 4.350e-23 Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 1072 YKVHYPGWESKWDEWVLRDRLRWGNERLAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVEKERVYLGEVLTSGHFWAKTEHVRLIQK 1347
YK+HYPGW+++WDEWV R+RLRW P++ Q D VEVWC G +VPGAWLEA V ++ E++++G++L+SG W VRL K
Sbjct: 1 YKIHYPGWDTRWDEWVPRNRLRWAMHHN--PMEN--FQVNDRVEVWCTGSNVPGAWLEAQVKAIKGEQIFVGKMLSSGPLWVAKTRVRLCPK 88
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Match: Hypothetical (protein n=4 Tax=Lotharella TaxID=74819 RepID=A0A7S3Z4G2_9EUKA) HSP 1 Score: 105 bits (262), Expect = 1.410e-21 Identity = 57/166 (34.34%), Postives = 83/166 (50.00%), Query Frame = 1
Query: 913 FKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEV-----YDGTAWWLARVVDKGEKPG----------YYKVHYPGWESKWDEWVLRDRLRWGNER-LAAPLKGTPLQAGDAVEVWCKGLHVPGAWLEAVVHEVE-----KERVYLGEVLTSGHFWAKTEHVRLIQK 1347
F+ + R+ P VGD V+V W+GKF +L ++G AWW A VV + + G YY+ H+PGWESKWDEW+ R ++RW A L+ + GD VEV + VP W+E V +V E +G + H W + + +RL+ K
Sbjct: 109 FRDEFFSRVSSPRVGDCVEVLWQGKFYSHTLGEHGTMGFEGKAWWQASVVAREPESGENGQQSDNQFYYRAHFPGWESKWDEWITRGQIRWPKPMDYQAELE---IDVGDHVEVLLESTRVPSVWMEGDVKKVTIDIDGVELFLVGGMKRPRHIWVRRDSIRLLYK 271 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig822.16373.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig822.16373.1 >prot_E_fasciculatus_S2_contig822.16373.1 ID=prot_E_fasciculatus_S2_contig822.16373.1|Name=mRNA_E_fasciculatus_S2_contig822.16373.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=497bp MRNLEIGDWRGAFRFKDGVIPWDMSPSAERNDDIRAPDSMPAEWSKRSMPback to top mRNA from alignment at E_fasciculatus_S2_contig822:4974..9463- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig822.16373.1 ID=mRNA_E_fasciculatus_S2_contig822.16373.1|Name=mRNA_E_fasciculatus_S2_contig822.16373.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4490bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig822:4974..9463- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig822:4974..9463- >mRNA_E_fasciculatus_S2_contig822.16373.1 ID=mRNA_E_fasciculatus_S2_contig822.16373.1|Name=mRNA_E_fasciculatus_S2_contig822.16373.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1491bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig822:4974..9463- (Ectocarpus fasciculatus EfasUO2)back to top |