mRNA_E_fasciculatus_S2_contig821.16365.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Match: DHQ_synthase (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6B2_9PHAE) HSP 1 Score: 545 bits (1405), Expect = 7.400e-193 Identity = 291/308 (94.48%), Postives = 297/308 (96.43%), Query Frame = 1
Query: 1 MVRPRATGTTPIPSIAALSFGLAISCCFTSGFSFVPSTSGGRVQPRTAAA--GRHTTAAARRALTGTNMVATEPAAGLLKTVTVDLEDRSYPIYIGEGILDSGDLLRRHVTSKKALVITNDKIGPLYLDKTVKILEAGGVEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQQVPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMDTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMEDMAARDAGVLAEAVERSCINKANV 918
M RPRATGT+PIPS+A LSFGLAISC FTS FSFVPST GGRVQPRTAAA GRHTTAAARRA TGT+MVATEPAAGLLKTVTVDL DRSYPIYIG+GILDSGDLLRRHVTSKKALVITNDK+GPLYLDKTVKILEAGGVEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQ VPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADM TLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCME+MAARDAGVLAEAVERSCINKANV
Sbjct: 1 MGRPRATGTSPIPSVATLSFGLAISCFFTSVFSFVPSTFGGRVQPRTAAAAAGRHTTAAARRARTGTSMVATEPAAGLLKTVTVDLGDRSYPIYIGDGILDSGDLLRRHVTSKKALVITNDKVGPLYLDKTVKILEAGGVEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQ-VPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMGTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMENMAARDAGVLAEAVERSCINKANV 307
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Match: 3-Dehydroquinate (synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z318_9STRA) HSP 1 Score: 358 bits (918), Expect = 6.840e-120 Identity = 184/240 (76.67%), Postives = 208/240 (86.67%), Query Frame = 1
Query: 199 MVATEPAAGLLKTVTVDLEDRSYPIYIGEGILDSGDLLRRHVTSKKALVITNDKIGPLYLDKTVKILEAGGVEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQQVPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMDTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMEDMAARDAGVLAEAVERSCINKANV 918
MVA+ P+ L TV VDL R+YPIYIGEGIL GDLLR+HVTSK+ALVITND++GPLYLD+TV +L GGV+VETVVLPDGEE+KS+EVL KI++ AL+ R+DR TFVALGGGVIGDMVGFAAAIYQRGVKFVQ VPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAV+ADM TL++LPDRELASGIAEVVKYGLI+D+ FF WQE + + ARDA L+EAV RSC NKA V
Sbjct: 1 MVASPPSKTLHSTVEVDLGSRTYPIYIGEGILREGDLLRKHVTSKRALVITNDRVGPLYLDETVAVLREGGVQVETVVLPDGEEYKSMEVLMKIMEAALTHRMDRTCTFVALGGGVIGDMVGFAAAIYQRGVKFVQ-VPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVIADMATLRTLPDRELASGIAEVVKYGLIRDAAFFEWQEARVGALRARDAETLSEAVRRSCENKAAV 239
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3U2_9STRA) HSP 1 Score: 337 bits (864), Expect = 4.570e-111 Identity = 170/229 (74.24%), Postives = 194/229 (84.72%), Query Frame = 1
Query: 235 TVTVDLEDRSYPIYIGEGILDSGDLLRRHVTSKKALVITNDKIGPLYLDKTVKILEA-GGVEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQQVPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMDTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMEDMAARDAGVLAEAVERSCINKANV 918
T+ VDL +R+YPIYIG+G+L+ G L+R+HV KKALV+TND I P+YLDK V LE G +EVETVVLPDGEE+K++EVL K+LDKAL ARLDRK TFVALGGGVIGDM GFAAAIYQRGV F+Q VPTTLMAMVDS+VGGKT VNH LGKNMIGAFYQPQ VL D DTL SLPDRELASGIAEVVKYGLI+D++FF+WQE M+ M ARD LA A+ERSC NKA+V
Sbjct: 58 TLEVDLGERTYPIYIGQGLLEEGSLMRKHVKGKKALVVTNDLIAPIYLDKCVAALEKEGNIEVETVVLPDGEEYKNMEVLNKVLDKALQARLDRKCTFVALGGGVIGDMCGFAAAIYQRGVNFIQ-VPTTLMAMVDSSVGGKTGVNHHLGKNMIGAFYQPQCVLIDTDTLNSLPDRELASGIAEVVKYGLIRDADFFKWQEDNMDGMLARDPSTLATAIERSCQNKADV 285
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5P5V7_HETAK) HSP 1 Score: 328 bits (841), Expect = 4.180e-107 Identity = 166/231 (71.86%), Postives = 192/231 (83.12%), Query Frame = 1
Query: 229 LKTVTVDLEDRSYPIYIGEGILDSGDLLRRHVTSKKALVITNDKIGPLYLDKTVKILEAGG-VEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQQVPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMDTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMEDMAARDAGVLAEAVERSCINKANV 918
L+ V VDL+DRSYPIYIG + D G+L+R+HV KK LV+TND +GPLYLDK VK LE +EVETVVLPDGEE K++EVL I++KAL+ R+DRK TFVALGGGVIGDMVGFAAAIYQRGV F+Q VPTTLMAMVDS+VGGKTAVNHPLGKNMIGAFYQPQAV+ D +L SLPDRELASG++EV+KYGLI+D+ FF WQE ME + ARD LA AV+RSC NKA V
Sbjct: 92 LEIVEVDLDDRSYPIYIGTDLYDDGELIRKHVKGKKVLVVTNDVVGPLYLDKIVKALEKDSQIEVETVVLPDGEENKTMEVLMMIMEKALATRMDRKCTFVALGGGVIGDMVGFAAAIYQRGVNFIQ-VPTTLMAMVDSSVGGKTAVNHPLGKNMIGAFYQPQAVVIDTASLNSLPDRELASGVSEVIKYGLIRDAPFFEWQEANMEQLLARDPAALAYAVKRSCENKAEV 321
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Match: DHQ_synthase (domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=D8TQJ6_VOLCA) HSP 1 Score: 321 bits (822), Expect = 3.070e-105 Identity = 161/241 (66.80%), Postives = 194/241 (80.50%), Query Frame = 1
Query: 199 MVATEPAAGLLKTVTVDLEDRSYPIYIGEGILDSGDLLRRHVTSKKALVITNDKIGPLYLDKTVK-ILEAGGVEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQQVPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMDTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMEDMAARDAGVLAEAVERSCINKANV 918
+ A E A+ +KTV VDL DRSYPIYIG G+L+ G+LLR+H+ K+ L++TN+ I PLYL++ K +LE G ++V+ V+LPDGEE+KSLEVL K+ DKAL R+DR TTF+ALGGGV+GDM GFAAA YQRGV FVQ VPTT+M+ VDS+VGGKT VNHPLGKNMIGAFYQP+ VL D DTL SLPDRELASGI+EVVKYGLI+D+ FF W E ME + RD G +A AVERSCINKA V
Sbjct: 4 VAAPERASASMKTVHVDLGDRSYPIYIGAGLLNHGELLRKHIPGKRVLIVTNETIAPLYLERCRKALLEGGQLQVDDVILPDGEEYKSLEVLEKVWDKALECRMDRGTTFLALGGGVVGDMTGFAAACYQRGVHFVQ-VPTTVMSQVDSSVGGKTGVNHPLGKNMIGAFYQPRVVLVDTDTLASLPDRELASGISEVVKYGLIRDAPFFEWLEANMERLLERDPGAIAYAVERSCINKAEV 243
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Match: 3-dehydroquinate (synthase AroB n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z480_COCSC) HSP 1 Score: 316 bits (810), Expect = 1.090e-103 Identity = 154/232 (66.38%), Postives = 190/232 (81.90%), Query Frame = 1
Query: 229 LKTVTVDLEDRSYPIYIGEGILDSGDLLRRHVTSKKALVITNDKIGPLYLDKTVKILEAGG--VEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQQVPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMDTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMEDMAARDAGVLAEAVERSCINKANV 918
+KTV V L DRSYPIYIG+G+LD G+LL+RHV K+ L++TN+ + PLYL++ L +GG ++VE V+LPDGE++KSL+VL K+ DKAL +RLDR +TF+ALGGGVIGDM GFAAA YQRGV F+Q VPTT+MAMVDS+VGGKT VNHPLGKNMIGAFYQP+ VL D+DTL SLPDRELASGI+E++KYGLI+D F W E ME + ARDA ++ A+ERSCINKA V
Sbjct: 1 MKTVEVPLGDRSYPIYIGQGLLDQGELLQRHVPGKRVLIVTNETVAPLYLERCRAALTSGGSGLQVEAVILPDGEQYKSLDVLQKVWDKALESRLDRNSTFIALGGGVIGDMTGFAAAAYQRGVHFIQ-VPTTVMAMVDSSVGGKTGVNHPLGKNMIGAFYQPKVVLVDVDTLNSLPDRELASGISEIIKYGLIRDPALFEWLEANMERLLARDAEAMSYAIERSCINKAEV 231
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Match: DHQ_synthase (domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BP02_9CHLO) HSP 1 Score: 318 bits (814), Expect = 8.240e-103 Identity = 157/240 (65.42%), Postives = 192/240 (80.00%), Query Frame = 1
Query: 199 MVATEPAAGLLKTVTVDLEDRSYPIYIGEGILDSGDLLRRHVTSKKALVITNDKIGPLYLDKTVKILEAGGVEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQQVPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMDTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMEDMAARDAGVLAEAVERSCINKANV 918
+ A E A+ +KTV VDL DRSYPIYIG+G+L+ G+LLR+H+ K+ L++TN+ I PLYL++ L GG++V+ V+LPDGEE+KS++VL K+ DKAL ARLDR TF+ALGGGV+GDM GFAAA YQRGV FVQ VPTT+MA VDS+VGGKT VNHPLGKNMIGAFYQPQ VL D DTL +LPDRELASGI+EV+KYGLI+D+ FF W E ME + RD +A AVERSC+NKA V
Sbjct: 89 VAAPERASIAMKTVNVDLGDRSYPIYIGQGLLNQGELLRKHIPGKRVLIVTNETIAPLYLERCKAALTEGGLQVDEVILPDGEEYKSMDVLGKVWDKALEARLDRGATFLALGGGVVGDMTGFAAACYQRGVHFVQ-VPTTVMAQVDSSVGGKTGVNHPLGKNMIGAFYQPQVVLVDTDTLGTLPDRELASGISEVIKYGLIRDAAFFEWLEINMERLLERDPEAIAYAVERSCVNKAEV 327
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Match: DHQ_synthase (domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FE63_MICCC) HSP 1 Score: 316 bits (809), Expect = 9.960e-103 Identity = 154/228 (67.54%), Postives = 189/228 (82.89%), Query Frame = 1
Query: 238 VTVDLEDRSYPIYIGEGILDSGDLLRRHVTSKKALVITNDKIGPLYLDKTVKILEAGG-VEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQQVPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMDTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMEDMAARDAGVLAEAVERSCINKANV 918
V VDL DRSYPIYIG G+LD+ DL+R+HV + ALV+TN+ I PLYL++TV LE+ G + VE V+LPDGE+ K+++VL +I DKAL A+LDR+TTFVALGGGVIGDM GFAAA YQRGV FVQ +PTT+M+MVDS+VGGKT VNHP GKNMIGAFYQP+ VL D+DTL++LPDRE +SG+AEVVKYGLI+D EFF WQE +E + AR+A L A+E+SCINKA V
Sbjct: 63 VNVDLGDRSYPIYIGSGLLDNSDLIRKHVPGRTALVVTNETIAPLYLERTVAALESSGELRVEVVILPDGEQHKNIDVLMRIFDKALEAQLDRQTTFVALGGGVIGDMTGFAAASYQRGVHFVQ-IPTTVMSMVDSSVGGKTGVNHPAGKNMIGAFYQPRCVLVDIDTLETLPDREFSSGLAEVVKYGLIRDDEFFEWQEANVEKLMAREAATLIHAIEKSCINKAEV 289
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Match: DHQ_synthase (domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835VTN1_9CHLO) HSP 1 Score: 313 bits (802), Expect = 2.290e-102 Identity = 154/231 (66.67%), Postives = 188/231 (81.39%), Query Frame = 1
Query: 229 LKTVTVDLEDRSYPIYIGEGILDSGDLLRRHVTSKKALVITNDKIGPLYLDKT-VKILEAGGVEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQQVPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMDTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMEDMAARDAGVLAEAVERSCINKANV 918
+KTV VDL DRSYPIYIG G+L+ G+LLR+H+ K+ L++TN+ I PLYL++ +LE G ++V+ VVLPDGEE+KS+EVL K+ DKAL +R+DR TF+ALGGGV+GDM GFAAA YQRGV FVQ VPTT+MA VDS+VGGKT VNHPLGKNMIGAFYQP+ VL D DTL +LPDRELASGI+EV+KYGLI+D+ FF W E M+ + ARD +A AVERSCINKA V
Sbjct: 1 MKTVEVDLGDRSYPIYIGAGLLNQGELLRKHIPGKRVLIVTNETIAPLYLERVRAALLEGGKLQVDEVVLPDGEEYKSMEVLGKVWDKALESRMDRGVTFLALGGGVVGDMTGFAAACYQRGVHFVQ-VPTTVMAQVDSSVGGKTGVNHPLGKNMIGAFYQPRVVLVDTDTLATLPDRELASGISEVIKYGLIRDAPFFEWLEANMDRLLARDPEAIAYAVERSCINKAEV 230
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Match: DHQ_synthase (domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GU80_9CHLO) HSP 1 Score: 315 bits (807), Expect = 9.070e-102 Identity = 153/239 (64.02%), Postives = 194/239 (81.17%), Query Frame = 1
Query: 205 ATEPAAGLLKTVTVDLEDRSYPIYIGEGILDSGDLLRRHVTSKKALVITNDKIGPLYLDKTVK-ILEAGGVEVETVVLPDGEEFKSLEVLTKILDKALSARLDRKTTFVALGGGVIGDMVGFAAAIYQRGVKFVQQVPTTLMAMVDSAVGGKTAVNHPLGKNMIGAFYQPQAVLADMDTLKSLPDRELASGIAEVVKYGLIKDSEFFRWQEGCMEDMAARDAGVLAEAVERSCINKANV 918
A E A+ +K V VDL DRSYPIYIG G+L+ G+LLR+H+T K+ L++TN+ +GP+YL++ K +L+ G ++V+ V+LPDGE++KS++VL K+ +KAL R+DR TTF+ALGGGV+GDM GFAAA YQRGV FVQ VPTT+MA VDS+VGGKT VNHPLGKNMIGAFYQP+ VL D DTL +LPDRELASGI+E++KYGLI+D+ FF W E ME + ARD +A AVERSCINKA V
Sbjct: 97 APEQASASIKMVHVDLGDRSYPIYIGAGLLEQGELLRKHITGKRVLIVTNETVGPIYLERCRKALLDGGQLQVDDVILPDGEKYKSIDVLEKVWNKALECRMDRGTTFLALGGGVVGDMTGFAAACYQRGVHFVQ-VPTTVMAQVDSSVGGKTGVNHPLGKNMIGAFYQPRVVLVDTDTLATLPDRELASGISEIIKYGLIRDAPFFEWLEASMERLLARDPEAIAYAVERSCINKAEV 334 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig821.16365.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig821.16365.1 >prot_E_fasciculatus_S2_contig821.16365.1 ID=prot_E_fasciculatus_S2_contig821.16365.1|Name=mRNA_E_fasciculatus_S2_contig821.16365.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=306bp MVRPRATGTTPIPSIAALSFGLAISCCFTSGFSFVPSTSGGRVQPRTAAAback to top mRNA from alignment at E_fasciculatus_S2_contig821:197..3497- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig821.16365.1 ID=mRNA_E_fasciculatus_S2_contig821.16365.1|Name=mRNA_E_fasciculatus_S2_contig821.16365.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3301bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig821:197..3497- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig821:197..3497- >mRNA_E_fasciculatus_S2_contig821.16365.1 ID=mRNA_E_fasciculatus_S2_contig821.16365.1|Name=mRNA_E_fasciculatus_S2_contig821.16365.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=918bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig821:197..3497- (Ectocarpus fasciculatus EfasUO2)back to top |