mRNA_E_fasciculatus_S2_contig82.16352.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig82.16352.1
Unique NamemRNA_E_fasciculatus_S2_contig82.16352.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Match: Soluble (NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW1_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 1.320e-160
Identity = 247/251 (98.41%), Postives = 248/251 (98.80%), Query Frame = 3 
Query:   75 MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIYV 827
            MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGL KEVKGADAQLRDLRRTVEYVENNRDSFAHIDN ELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILD QSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKS+CQIWTILLLSFILIILVLMLIYV
Sbjct:    1 MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIYV 251
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M2_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.130e-62
Identity = 115/244 (47.13%), Postives = 167/244 (68.44%), Query Frame = 3 
Query:   93 ASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 824
            A+ DPFY V+DE++AK+  I+ RL+ F+ LL  T+TA N+DF+D +K L +++K A+ QL+DL  TVE+V+ +R  FAHID+ +L +R T+++++KQ L        G   K K+A D R ++ K  +  +LGA +    +NT  I  QQ++ RM + +QDEDLEELG  V+RV + A  IN EL++QNR+L  L+ D+DEATE MNFVMG+L KLLKTK  CQIWT+++L F     + +LIY
Sbjct:    3 AAQDPFYVVKDELTAKVHTIQKRLQTFKRLLETTDTATNQDFKDSKKALGRDLKAAEKQLKDLTLTVEFVQKDRAQFAHIDDYDLQQRTTYIAETKQALGEIKAYYSGDDVKRKLADDMRKDIMKQPT-SNLGATSSDAMENTHFIQGQQAQQRMIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFFXXXXXIFLLIY 245
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6G0_9STRA)

HSP 1 Score: 208 bits (529), Expect = 8.690e-62
Identity = 114/235 (48.51%), Postives = 169/235 (71.91%), Query Frame = 3 
Query:   72 AMSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTI 776
            ++ L S ASHDPFY V+DE+  K+E I  RLER+++LL   NTA + +F++++KGL++EVK A+AQ++DL  TVEYVE +R++FAHID+ EL ERK F++ +K  L  A D L G + + K+  D++ ++A  R  G+ GA+T++E  NT+ I +Q ++ R  +  QDE+LE L + V+RV   AT I+ EL++Q+RL+  L+++MDE TE MNFVMG+L KLLKTK  CQ+ TI
Sbjct:    9 SVPLMSAASHDPFYVVKDELVNKLESISSRLERYENLLWKINTAASVEFKEVKKGLSREVKAAEAQIKDLALTVEYVEKDRNAFAHIDDRELDERKKFIATTKNKLSGARDVLTGPKARAKIEADEKQQLAATR--GNYGAKTDIEMANTDFIHNQHAQTRTIMQEQDENLEHLDSAVDRVHRMATEIHGELKTQSRLIGDLENEMDETTEKMNFVMGKLAKLLKTKDTCQLLTI 241
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMQ2_9STRA)

HSP 1 Score: 197 bits (501), Expect = 9.280e-58
Identity = 109/244 (44.67%), Postives = 167/244 (68.44%), Query Frame = 3 
Query:   93 ASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 824
            AS DPFY V+DE+S KI+ I  +  +F +LL++TNTA++ +F+D R+ L K++K A+ QLRDL  TV+ V+ +R+ FAHID+ EL +R  ++  +++ L        G++ K KM  D+R+E+ + +    LGA    E +NT+ I +QQ++ +M + +QDE+LEELG  V+RV + A  INEEL+ QN++L  L++D+DEA E MNFVMG++ KLLKTK  CQIWT+++L       V ++IY
Sbjct:    3 ASVDPFYVVKDELSMKIDAITGKTVKFLELLDSTNTAKSPEFKDARRSLGKDLKSAEKQLRDLTFTVDMVQKDREQFAHIDDYELEQRDAYIKKARKNLNEMKSTYQGERVKRKMIADERAEI-ESKPMSSLGATNSDEAENTQFIHEQQAQGQMIIRQQDEELEELGYAVDRVNDMAVGINEELKVQNQMLKTLEEDIDEAAEKMNFVMGKMAKLLKTKDTCQIWTVIILVXXXXXXVFLVIY 245
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Match: t-SNARE (coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYP6_AURAN)

HSP 1 Score: 196 bits (498), Expect = 3.640e-57
Identity = 107/252 (42.46%), Postives = 177/252 (70.24%), Query Frame = 3 
Query:   72 AMSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNT-AQNRDFQDLRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 824
            A  L S  ++DPF+ V+DE+ AK+E I++R+ +F  LL    T A ++ F+D RK L +E++GA+ QL+DL  TV+YVE +R +F+HID+ ELSER+ F++ ++  +  A DA+ G + + KM  DD++ +A  +  GD GA T++E  NT+ I  Q++R +  +  QD++LE+L   V+RV   A+ I+ EL++Q+R++  ++ ++DE TE MNFVMG+L KLLKTK  CQ+WTI+ L+ +L+++V+++I+
Sbjct:    7 AQGLMSGGANDPFHVVKDELVAKLESIELRVGQFNGLLYGPGTTAGSKPFRDCRKALGREIRGAEGQLKDLGLTVDYVERDRGAFSHIDDRELSERRDFVAAARSRVANARDAVGGPRARAKMDADDKAAVAAQQ--GDYGASTDLEMANTDFIHGQRARTQATMREQDDNLEQLDGAVDRVHAMASEIHGELQTQSRMINDMESELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLVVMVMLVIW 256
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Match: Soluble (NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK7_9STRA)

HSP 1 Score: 182 bits (461), Expect = 9.400e-52
Identity = 103/231 (44.59%), Postives = 151/231 (65.37%), Query Frame = 3 
Query:   93 ASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTILLL 785
            +S DP++  RD+V+AKI  ++ +  +    ++   T  +RD ++L+  +A++++ A  QLRDL+RTV+YVE +R SF HID+ EL +RK FL+  K++L       +G +   K+ ++  ++   YR KGDLGA++  E DNTE I DQ+S     +ARQD+DLEELG HV+RVG  A  INEELR Q R+L  L++D+    ESM  VMG + K+LKTK R QIW I+ L
Sbjct:    6 SSGDPYFVARDQVAAKIAAVQAKHAQLNAAIDKARTLTDRDVKELKPVVARDLETAKGQLRDLKRTVDYVEKDRASFPHIDDAELRDRKAFLNAQKKILNAIVADTEGDKLAAKLEKETAAKRDSYR-KGDLGAKSNAEADNTEFIHDQRSNRMAHIARQDQDLEELGEHVDRVGMHAETINEELRDQGRMLDDLNEDIVTTHESMGMVMGAMAKILKTKDRAQIWLIVTL 235
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Match: t-SNARE (coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA67_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.820e-49
Identity = 103/246 (41.87%), Postives = 158/246 (64.23%), Query Frame = 3 
Query:   96 SHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGART--EVERDNTEHILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIYV 827
            + DPF+A R+E+ ++++YI+ + E F  LL  TNTA +   +DLR  L ++++ A+ Q R+L + V  VE NR  F HIDN E+ +R+ F++  KQ L++  + L+    K KM+ D R     +   G  G RT    +R N + I +Q+SR  + L  QDE LEELGT V+RVG  A  +N+EL +QNR+L  L+ +++   E M+FVMG+L KLLKTK + Q+W I++L+ +LI+L+L+ IYV
Sbjct:    2 AQDPFFAAREELRSRVDYIQTQHENFLRLLQTTNTAPDLSCRDLRDSLCRDIEAAENQCRELEKVVAVVEKNRQRFRHIDNHEIGQRRAFVTKMKQSLVKIWNNLESDYVKNKMSGDRRDPSRSFDG-GAEGHRTGRSGKRAN-DFIEEQRSRQHLMLCEQDEGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMSFVMGKLSKLLKTKDKYQLWLIIVLTVVLIVLILLTIYV 245
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTE6_9STRA)

HSP 1 Score: 167 bits (422), Expect = 6.590e-45
Identity = 100/252 (39.68%), Postives = 155/252 (61.51%), Query Frame = 3 
Query:   72 AMSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQ-NRDFQDLRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 824
            ++ L + A  DPF+ V+DE+  K+  I+ R+  F  LL  + T   N  F++ +K +A+EV+ A+AQLRDL  TVEYVE +R +F HI++ EL++RK F+  +K+ +  A DA+ G + + K+  D+++ +A  R  G   A  ++E  NT  I    +RV   +  QDE LE+L                EL +Q R+L  ++D++DE TE MNFVMG+L KLLKTK  CQ+WTI+ L+ +LI++V ++IY
Sbjct:   90 SVPLMASAGGDPFHVVKDELVVKLRSIEGRVATFTTLLYGSGTTHGNPRFREAKKAVAREVRAAEAQLRDLALTVEYVERDRGAFPHINDAELNQRKAFVDKAKRDVASARDAVAGPRARAKIEADEQAALASQR--GAYDASGDLEMQNTAFIHSSHARVAATIQEQDEGLEQLDGAXXXXXXXXXXXXXELSAQARMLDDMEDELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLIVMVFLVIY 339
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Match: t-SNARE (coiled-coil homology domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BS24_SAPPC)

HSP 1 Score: 157 bits (396), Expect = 4.040e-42
Identity = 91/251 (36.25%), Postives = 150/251 (59.76%), Query Frame = 3 
Query:   72 AMSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 824
            A S    AS DP+Y  ++++ +K+  I  + +R++ LL+  N +  +DF  L   LAKE+  A+  L  L +++  +E +R  +AHID  E+S RK+F+SD++Q L+  + AL     K K+ +D+R  +A           T    D    + D++   +  +  QD+DL+EL T V R+G+ A  IN E++SQN +L  +D D+D+ TE MNFVMG++ +LLKTK  CQ+  I+ L+ +L+I+V ++IY
Sbjct:    7 AKSAGPSASGDPYYVFKEDLESKVSSIHQKYKRWKHLLDARNASPTKDFGKLTDELAKELATAERSLGFLEQSIRAIEADRTKYAHIDRIEVSSRKSFVSDTRQDLMMMTAALTSDAAKNKVRRDERKALAPL---------TPAPIDRNSILADEKQHQQQIIKEQDKDLDELHTSVSRLGQVAVTINSEIKSQNDMLKDVDADLDDTTERMNFVMGKMSRLLKTKDTCQLGGIIFLTIVLLIMVFLVIY 248
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Match: t-SNARE (coiled-coil homology domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKP6_9STRA)

HSP 1 Score: 158 bits (400), Expect = 4.410e-42
Identity = 93/243 (38.27%), Postives = 150/243 (61.73%), Query Frame = 3 
Query:  102 DPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTA-QNRDFQDLRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIYV 827
            DP++  R ++  K+E     L  F  +++ T+TA  + +++D +K L + +K A++ LRD+++TV+ VEN+RD F HID+ +  ER++ +  S+  +  A D ++    K+K+  D+R+        G LGA+ + ER NT+ ILD Q++  M +  QDE L+ELG  V RVGE A  I EE+  QN++L  LD+DM  A E +  VMG+L K + TK+R Q+ TI++L+ I II+    IY+
Sbjct:   61 DPYFVFRSDLQNKLESADEFLADFLRIVHETDTAVSSLEYRDSKKQLKRHLKSAESTLRDVQKTVQAVENDRDKFPHIDDSQFFERRSLVETSRSRIQHAKDEMNSDIIKKKVLSDERNRAVARSGDGLLGAKNDEERQNTDFILDNQAQSSMLMQEQDETLDELGNAVLRVGEMAGTIGEEIGQQNKMLNDLDEDMTTAEEELGMVMGKLAKFMGTKNRGQLKTIVILTLIAIIMFFAAIYL 303
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig82.16352.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Soluble1.320e-16098.41NSF Attachment Protein (SNAP) Receptor (SNARE) n=1... [more]
Hypothetical2.130e-6247.13protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical8.690e-6248.51protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Hypothetical9.280e-5844.67protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
t-SNARE3.640e-5742.46coiled-coil homology domain-containing protein n=1... [more]
Soluble9.400e-5244.59NSF attachment protein receptor n=1 Tax=Tribonema ... [more]
t-SNARE2.820e-4941.87coiled-coil homology domain-containing protein n=1... [more]
Hypothetical6.590e-4539.68protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]
t-SNARE4.040e-4236.25coiled-coil homology domain-containing protein n=2... [more]
t-SNARE4.410e-4238.27coiled-coil homology domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig82contigE_fasciculatus_S2_contig82:24143..30769 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score455.3
Seed ortholog evalue1.9e-125
Seed eggNOG ortholog2880.D7FKW1
Preferred nameSTX6
Model size1130
KEGG koko:K02925,ko:K03691,ko:K08498,ko:K08499,ko:K08500
KEGG ReactionR09295
KEGG Pathwayko00514,ko03010,ko04130,map00514,map03010,map04130
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000138,GO:0000139,GO:0000149,GO:0001505,GO:0003674,GO:0003824,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005783,GO:0005794,GO:0005795,GO:0005802,GO:0005829,GO:0005886,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006897,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007032,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008417,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0016740,GO:0016757,GO:0016758,GO:0017156,GO:0019538,GO:0019905,GO:0022406,GO:0023052,GO:0023061,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030285,GO:0030424,GO:0030658,GO:0030659,GO:0030672,GO:0031090,GO:0031201,GO:0031224,GO:0031300,GO:0031301,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0031985,GO:0032456,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0034613,GO:0034645,GO:0036065,GO:0036066,GO:0036211,GO:0042147,GO:0042886,GO:0042995,GO:0043005,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045335,GO:0046903,GO:0046907,GO:0046922,GO:0048278,GO:0048284,GO:0048471,GO:0048489,GO:0050789,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055037,GO:0060341,GO:0061024,GO:0061025,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0090161,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098563,GO:0098588,GO:0098657,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099501,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903827
Exons8
EggNOG free text desc.SNAP receptor activity
EggNOG OGsKOG3202@1,KOG3202@2759
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-17_001570.1
EC2.4.1.221
Cds size756
COG Functional cat.U
CAZyGT65,GT68
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01003,ko03011,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig82.16352.1prot_E_fasciculatus_S2_contig82.16352.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig82 24217..30469 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842481.2356067-UTR-E_fasciculatus_S2_contig82:24142..242161696842481.2356067-UTR-E_fasciculatus_S2_contig82:24142..24216Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig82 24143..24216 +
1696842481.355953-UTR-E_fasciculatus_S2_contig82:30469..307691696842481.355953-UTR-E_fasciculatus_S2_contig82:30469..30769Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig82 30470..30769 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842481.252844-CDS-E_fasciculatus_S2_contig82:24216..242661696842481.252844-CDS-E_fasciculatus_S2_contig82:24216..24266Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 24217..24266 +
1696842481.2636125-CDS-E_fasciculatus_S2_contig82:26825..269351696842481.2636125-CDS-E_fasciculatus_S2_contig82:26825..26935Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 26826..26935 +
1696842481.2789414-CDS-E_fasciculatus_S2_contig82:27494..275981696842481.2789414-CDS-E_fasciculatus_S2_contig82:27494..27598Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 27495..27598 +
1696842481.2969077-CDS-E_fasciculatus_S2_contig82:28154..282711696842481.2969077-CDS-E_fasciculatus_S2_contig82:28154..28271Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 28155..28271 +
1696842481.3120456-CDS-E_fasciculatus_S2_contig82:28409..285081696842481.3120456-CDS-E_fasciculatus_S2_contig82:28409..28508Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 28410..28508 +
1696842481.3254905-CDS-E_fasciculatus_S2_contig82:29192..292991696842481.3254905-CDS-E_fasciculatus_S2_contig82:29192..29299Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 29193..29299 +
1696842481.3348753-CDS-E_fasciculatus_S2_contig82:30089..301811696842481.3348753-CDS-E_fasciculatus_S2_contig82:30089..30181Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 30090..30181 +
1696842481.343812-CDS-E_fasciculatus_S2_contig82:30392..304691696842481.343812-CDS-E_fasciculatus_S2_contig82:30392..30469Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig82 30393..30469 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig82.16352.1

>prot_E_fasciculatus_S2_contig82.16352.1 ID=prot_E_fasciculatus_S2_contig82.16352.1|Name=mRNA_E_fasciculatus_S2_contig82.16352.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=252bp
MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQD
LRKGLAKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNGELSERKTFLSD
SKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTE
HILDQQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTA
LDDDMDEATESMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY
V*
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mRNA from alignment at E_fasciculatus_S2_contig82:24143..30769+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig82.16352.1 ID=mRNA_E_fasciculatus_S2_contig82.16352.1|Name=mRNA_E_fasciculatus_S2_contig82.16352.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6627bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig82:24143..30769+ (Ectocarpus fasciculatus EfasUO2)
GTTCTCGTCAGTGCGGTGCCGCCAGGAAACACGGGACATACAGGAGCACG
CACCAAGGGCTGGAGTCTTGAGCAATGTCGCTGAATAGCGTGGCATCGCA
CGATCCGTTCTACGCAGTGCGAGAGTGAGTCCTAACAAGAGTTCCGCCGC
GTTTCGTGTTGAGTGATTCGGCGGCGAGGGCAACGCTTGTAAATATGTAG
TTGCATATGTGCATGTTGCATGTTGCCCACCCTCGCCTTGGAACGTTCTA
CGTAGTGAAGTGAAAGAGGGCTACCCTTGAAGACAAACCTTCTATTTGAT
GGTGTGCCTGTCGTAGTGCTGCTGTTGTGCTTTAGAGCAAACGATTACCC
TCATCTGCGGACTACAATAGTACGAGTGCTGCGTGCTGCTGGAATGGGGT
CGGAACACTGCTTGCTTTCGTCGTGGTCAGAACACTGACGCGCACCTCCA
CAGCAGTAGTCGCGCGTGAAGTGCTCTCAAAGCAGCACAATATGCTCACA
AAGCAGCACAATACGAAATCTGGCCGCTTGGCGTTGAATTCAAGTTGCAC
AAACGCCGAGTCCGTACACGTGCGTTAATTGACAACTGAACACACCGCAT
CCGGATTCGTTCTTGCTTCCCTCAGAATTGTAGATACGCAACCTCGTGAT
CAACGCCTTGTGATCAATGTGCAATCATATCCGGCAGCACCGGTAACGAA
ACGTGATTATGATTATATCATGACGCAGCGTAACGCCACCGTGCGGTTCT
TTGTGTCGTCGCTCCGTAGGAGTACCGCACCTGATTTCGGTATGTTCAAT
CATATCGACCTGCTGTGTGCTCGTTGGCCAGAACACAAAAGAACCAACAG
TCTCGAACATCAACGAGCCTTCAACACTCGGAGCAGCAGATAATATTCGG
GCACACCAGTCTGAAAGAAGTAGTTGATACTGCATGTAGTGGGTAAATGG
GTTCCCGTAGCAAGATGTGTGTAAGTTGATGTGTGTAAGTTGTTGTCAAG
CATGGGGCCATCGTCGGAAAATTGAGAACCGCGTCTTTCAGCCTGCCGCT
TGCAACCTTGGAAACGTGATGGTATGCCTACAGAGTGATAGTTTGGCTAT
TATCGGCGTAAAACGCTCCTCACATAGTTTAGGGGCAGGGGGCGAAGAAC
AACCTGGTTCGAGAACGACCGAAAGAGGTCTCAGCGACCACACACGAGAT
GCATACGACAAGTTGGGAACTGTTCGACAAGTGAAATACTCCAGTTTTCG
CACAGAGCAGCGGTTGGGACTTGTCGTTACACCAGAGCATGTCTACCGCT
CCACATCTTCTCTAAATTCAAGACAAATATCCACCAGGGTAAGTTCAGGA
CGAAGCAGGCGACACAACGGGTGCTTTATTTAAACACGCTCTATGCGTTT
TTATTATGTGTGGAAGTTCGATGGGAAATCAGTAGAGGGCGGACATCCTG
CGCGTTGGCCGCCCAGATCTGTTAGTTGCTGGGGCCGTGCTGTCGAAGGC
TGCAGCTGCGGCCCGAATTGTCCGCAAATCTTGGTCCATACTATTCACAA
CCCACTGCTTTACGTGCCATCGAAGCCCCAATCCCTCAAACTGCTGCTCG
TCCGAGGCGACTAGTGGGGTGAACTACAGTTGGGGCCCGCCGTTAAGAAA
AAAATATTTAAGAAAATAACCCTAAAATTTGCATGAAAATTACGAAAAAG
TGACTATGAACCACACCTCAAAACGGACGCAAACACACGCCCATGACAAA
TAGTTTGGAGCCTTTTCGCATTGCTTCTGAAATATTCAATGTGTTGTTTC
GGTTGTTGCAAAGGGGGTCAGCACACCTCGGCACCCTGGCAGCGTCAGTT
GGACGAGACCTACCTCCGGACGAGGTGTTTTCCATTTCTTCTGTGTTGCA
CTTGCTTGTACTCGGTTTCGTGCACAGAGGATACGGTTGTCGAAAGAATG
GAAAACATAAGAAACGGAAAAACTGAGTAAGCCAAAATGACAGAGCCTAA
CAAAAAGAAACGGCCATTGAAGAAAAGTCGTGAGGATCCGACAGCCAGAA
ATATAAGAAATTCAATGTAAGAAAATACTCCTTGATGCTGGTGTTTGCTC
CAGAAATAAGACTTTGAGCCTCGACCTGAACTTGACGTTTCTTATTCGCG
GGCCCCAACTGTACTACTGCTGTACTGTATCAGCTGCCGCAGGCTCTCGA
ACCTCACTACAAGACATAGAGGGAAGCGCAAAAACCATGTGTCAACGGAT
GGAAAGCCAGTGCATCCGCGATGAGGTGGAACTCTATCCTTGCTTGAAAA
GAACGAAGATAAAGATATGTACGACATTTTATTCCAGAACACATGCGCAG
CGGTGACAACTTCACCTGGTCCGGGGCATGTACACACCGTTCCACATTCA
TGTTTTTCTTTGTTCGGTGTTCGATGTTCTCGTGGTTGGTTGGTATTTAG
TTGCACGTGCAATCGAGTAGATGAGCAGCGAGGAGCATGCGATTTGGCCC
GTGACTTTAGGGTGCACCACCTTCCCGTAGCCGTCGGTGTGACGCTGTGA
TGCGCATGGATGCCAGGGGGCACCAAGCTCCGTGTGTTGCATACGCCCCT
AGTCCGATCAATCTTGACAGCAACGCTGTGTTCTCCTCATAATGCAATCT
TCTGCCTACATTTTATTCGCCTTGAAACATCAGTGAGGTTTCTGCCAAGA
TTGAGTACATCAAGGTTCGACTTGAGCGCTTCCAAGATCTGCTCAACAAC
ACCAATACTGCCCAAAATCGGGACTTTCAGGATCTCAGAAAAGGTAGGTG
TGCGGCGGGCAGTGGGAGGATACGCACGTCCGGGGACAAGTCACCAAAAC
GTTTGTATCAAGGGCGTCTCGTGTTCTACCTGACTGTTGGTCGTATCGTG
CGACAGAGCGATGTGATAGACCTCGACCTATGTTTTGATGCGTTGTTCCA
TGCTGTTGTCGAATCGTACCGACTGTGGACGCAACTGTGGAGACATGACG
GATATATTGCCGACCGTGGCGGATCAAAACCGACCGATTGGTCTTAGACA
AGCTCTATTATGGCCGAGATCTTCCGAATTCACCTTTGTAGGGTGCTGTC
TTGGTTGTAAAACCAATAGGATTATGAACTTCCGTGTAGGGGCGGTGCGA
TATCTCGCACAAGGACCGCAAGTGAGCAAACGATTATCGTGGATTCAGCA
ACACCCCAACAGCATGATGCAACTTATCACGGTCGATGCCGCGCTGGTCT
GGCAATAGTTGAGCAGCAATTTTCGTGGTCCGGTCGACTAGCTAGTCTCG
TCGATAGGTCTAACGCTTTTTGTTCTTCGTGTCGCCTCCATGAACTAACC
AGGGCTTGCCAAGGAGGTCAAGGGGGCAGACGCCCAACTGAGAGATTTAC
GGAGGACTGTGGAGTACGTGGAGAACAATCGAGACTCCTTCGCTCACATC
GATAACGTGAGCCGTTTTGGGTCTGACAATTAAGTTCGGCCCTTTCGTGG
GGTGCCACGACAGCCCGTGAACACTCCTGGGTAGGCGTTTGATTCTAAGG
CGTTGGCGAAATCTGTGAAAGGACGAAGGCCTACTGCTGTCGTGTCTTCA
TTCTGGTGTTTGCTTGGCTTGTTTTGGCTTTGCCATCCGTCGCGTGCTGT
GTCGGTGTATGGATGAATGTCATCTAGCCCCGTATCGTGCTGCACAGCTG
CCTATTGATATGGAAGCAAACCGACGAATATTGTCGGCGGTACGAGTCCC
GAGCTGGATTTTTTTTTGCTCATTGTTTCAGGCTTGATAACGGAAGCGGG
GACTGCCTCTTCATGTACGCATGGACGTGAAGACACGACAGGTGTACCGT
GCTTCAGTTTCGTGCTGCAAAGCCGTCTATTGATCACACTTGCCCTGTGG
GCACTCTAGGGACGTTGTTGGTGAAGCCCGTTCGCTTCGGGATGATAGAT
GTTACATGCGGTGCAAGAATTTCGTTACTGACATGCGGCTTGGTTGTTGT
TGCTTGTGGCAGGGTGAGCTATCTGAGCGAAAAACATTCCTCTCCGACTC
GAAGCAAGTGTTACTCCGCGCCAGTGATGCGCTCGACGGGCAGCAAACCA
AAGAGAAGATGGCGCAAGACGACCGTTCGGTAAGTCACACCATGAATCCG
ATGATGTCGTCTGCTGTATGTGTATTGTGACTCCTACACTATGTAGCAAT
GAAACCTTTCAGCCATTCTTCAAGCGACAACTTTTCGCATTCTCGTACAC
TCCTCTGCTGGCCTTAGGAAATGGCGAAATACCGGAGCAAAGGAGATTTG
GGGGCGCGGACAGAGGTTGAACGAGACAACACTGAGCACATTCTGGATCA
GCAGTCACGCGTTCGAGTAAGTTACTGTGTGTTGAAGCAGGCGGTTGTAG
CATAAAGTACCAACGCGTGAGCGAGGGCATTGGCCCGACCCACGACCTAA
ACGTGGGCTTTAACATTTCGTCCTAGAGGTCCTGATGGCGCGATGGCGCG
GAGCCCCCCCCCGCGGGAATTGTACCGGGGAAGAGTACTTCCGTTGTGGC
GAAATTCCGAGCGATTCCGGTGTATTCATTTGATCCGGACCGAACGCGTG
TTTTTGGATTTTCTCGAGAGCAACGAAAGGCTCACTTTGGAACACTTTGA
GTTCTGATGACATGGCAGGTTGTTCGTCTCAAAGCAACAGTATGTCGAAG
TATCTGCGGATAAAGAACATAGAACGTTTGAGGCCCCCTGCTGAATTGGC
AGCACGGATCTATATGTGAAGTTTATCAGTGGGACAAAGGTCTTTTGTCA
GCGACACAATAATGAAACAAAGGGTTGTCCCACAGGAGTGCAACAGCAGC
GTTTCTTCGAGACGTTCGATTTTCAATTTGAGCTACCTGAGACTCGCGAG
CAACATCCTGCTCGACACTGGCTGAATGAATCGCAGTGCTACGGCTGCAG
TTGACAAATCTGCAACATCTAGTCAGTATAAATTACCGAGTTGCCCATGC
AGCATAGCAGCACAGACCTAACCGCAACCGCATGGGGCTCGCGAGCTCAG
ATGCAACTTGCGCGACAAGACGAAGACCTCGAAGAGCTGGGCACTCACGT
AGAGCGGGTCGGCGAGACAGCGACTGTCATCAACGAAGAGCTCAGGAGTC
AAAATAGGTGAAGTGCAGGTCTCGCCCTAAGACTCCAATGTCCGATGCAC
GTCATAATTTGCTGTACATACTGTAAACTCCAAATTAAGGTCACTCCTGC
AGTGCTCAAGTTTTCCATGTTGATGGCTTTCGGCACGTAAATCAAACGAT
TATCATTGCGTCAAGGGGTTGTCATAGGTGCAGATTTATTTGGACGTGCC
CCTGAAGATTTTCAGCTTTACAGCCCGGTTTTGTTCAAAAAGTAGAGCAC
CCAGGCGCTGAAAAACACTAATCGGGAGCGAGGGCGGGTAAGGGGTTAGA
GACTGTGACTGGCCAAAAAGGAAAAGTATGTCGAGGCTTTTTGATGTCGG
GGCCGAACTCAGCTTATCGCGTGATGAGAAAATCAATGGCAAAAGCGAAC
TGATTTGTGGAACACGCAAAAACCAACTTGGGACTGCACCCTCCCGGGGT
GACGTCGTATTGGCGATGACTGCGCCGAATGCGAGTGGCACATTGGCCGT
GCAGAACCCAAACGCATTACCCGTTGCTTGGAAAAGCTGTTATGCGTTGA
TTCGGTGGGCGTGTCGATTTTTCGTGCGAATGTAGGCGGGTCCCTGTGGA
AGTTGCTTCCACAATTTACGACCAAGAGAGCCCGGTCAATGCAAAGAGGC
GGCCCAAAAATGGTTTTGAAGAAGACTGCGAATGAGGCTTGGACCACTGG
TATCACCTGCTATGCTTAGCTCCCTATTGTGCACACGGTCTACCGCTCTA
CCTTTTTGGTGGCCAACCCCGTGTCTCTGAATGTCCGCCTTTTACAGGCT
GCTGACAGCGTTGGACGATGACATGGATGAAGCCACGGAAAGCATGAACT
TCGTTATGGGACGGCTGGGGAAGTTGCTCAAAACTAAGAGTGAGTCGGTC
GACAGCGTGACTCATTCGTAACCATTTCAGTGTTCTGGTCCCTTTGATCC
CCCCGGTGTGCACCTCGCCAAGCTGTTGCAATGCAAGTCAGGTCGCCGTT
GGAAATAATGCATCAAAGAGCATACCTGCGACGTCTGACCTGCACAAAAC
TCGATGTCCCTTACCCACTGGCGTCTTTCTCTTGCATGTGCTCACCACAG
GCAGGTGCCAAATCTGGACGATTTTGCTGCTATCTTTCATCCTCATTATA
TTAGTGCTGATGCTCATATATGTTTAGTGTAGAGCTACAGGCTCGCCTTG
GCGGACTGACCAACGGTGCGGCGAATTGGGAAGAGAGGGACTACCTGCTG
GAGCAACGTCACACAGCAGGGAAATGATGACAACATGTACCAGTAGGTTT
ACGCGGGTCGAGTTTTGTTAGATCAAACTACAGCTGTTGCTGTCTAAAGG
CTGTTTAGCCCGGACTTTTAGTCCAGTTCTACTCTCAGCTTTTGTTTCGC
ATTCTCCCCGTTGTGAGCACGTAGAGTAGTGAGCGCGTACACTCATCTCC
AGGCAGCGTATACGAAGTAGAAGACGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig82:24143..30769+

>mRNA_E_fasciculatus_S2_contig82.16352.1 ID=mRNA_E_fasciculatus_S2_contig82.16352.1|Name=mRNA_E_fasciculatus_S2_contig82.16352.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=756bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig82:24143..30769+ (Ectocarpus fasciculatus EfasUO2)
ATGTCGCTGAATAGCGTGGCATCGCACGATCCGTTCTACGCAGTGCGAGA
TGAGGTTTCTGCCAAGATTGAGTACATCAAGGTTCGACTTGAGCGCTTCC
AAGATCTGCTCAACAACACCAATACTGCCCAAAATCGGGACTTTCAGGAT
CTCAGAAAAGGGCTTGCCAAGGAGGTCAAGGGGGCAGACGCCCAACTGAG
AGATTTACGGAGGACTGTGGAGTACGTGGAGAACAATCGAGACTCCTTCG
CTCACATCGATAACGGTGAGCTATCTGAGCGAAAAACATTCCTCTCCGAC
TCGAAGCAAGTGTTACTCCGCGCCAGTGATGCGCTCGACGGGCAGCAAAC
CAAAGAGAAGATGGCGCAAGACGACCGTTCGGAAATGGCGAAATACCGGA
GCAAAGGAGATTTGGGGGCGCGGACAGAGGTTGAACGAGACAACACTGAG
CACATTCTGGATCAGCAGTCACGCGTTCGAATGCAACTTGCGCGACAAGA
CGAAGACCTCGAAGAGCTGGGCACTCACGTAGAGCGGGTCGGCGAGACAG
CGACTGTCATCAACGAAGAGCTCAGGAGTCAAAATAGGCTGCTGACAGCG
TTGGACGATGACATGGATGAAGCCACGGAAAGCATGAACTTCGTTATGGG
ACGGCTGGGGAAGTTGCTCAAAACTAAGAGCAGGTGCCAAATCTGGACGA
TTTTGCTGCTATCTTTCATCCTCATTATATTAGTGCTGATGCTCATATAT
GTTTAG
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