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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1584 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-17_001620.1 |
| Cds size | 1584 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842480.7737558-CDS-E_fasciculatus_S2_contig82:807..1236 | 1696842480.7737558-CDS-E_fasciculatus_S2_contig82:807..1236 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig82 808..1236 + |
| 1696842480.786652-CDS-E_fasciculatus_S2_contig82:1432..1576 | 1696842480.786652-CDS-E_fasciculatus_S2_contig82:1432..1576 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig82 1433..1576 + |
| 1696842480.7982259-CDS-E_fasciculatus_S2_contig82:2151..2292 | 1696842480.7982259-CDS-E_fasciculatus_S2_contig82:2151..2292 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig82 2152..2292 + |
| 1696842480.8086023-CDS-E_fasciculatus_S2_contig82:2594..2834 | 1696842480.8086023-CDS-E_fasciculatus_S2_contig82:2594..2834 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig82 2595..2834 + |
| 1696842480.8191261-CDS-E_fasciculatus_S2_contig82:2958..3384 | 1696842480.8191261-CDS-E_fasciculatus_S2_contig82:2958..3384 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig82 2959..3384 + |
| 1696842480.8290036-CDS-E_fasciculatus_S2_contig82:3587..3791 | 1696842480.8290036-CDS-E_fasciculatus_S2_contig82:3587..3791 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig82 3588..3791 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig82.16348.1 >prot_E_fasciculatus_S2_contig82.16348.1 ID=prot_E_fasciculatus_S2_contig82.16348.1|Name=mRNA_E_fasciculatus_S2_contig82.16348.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=528bp
MMRPGSAGIGDPRDHTTGEGNTEQELLLKIGLLAKHHARNVQALNRLRST
SAPPTTAWDRVAVPPPIEGPNPVQLRRRVTPKGNPEQKRTRPHCHSFSPD
RVFTRVVDSSASKKKLQPTVVKPFRGMETHVAAWTRKMRTYEELELQTKK
DKEEAKARDRERLITAINDGREFSGVITRSNEMMARRRQKETEAEDDEAR
RSREFKARPLHIDNEDWQTIKDRQSLRRKQRIQMRMDLMSSLSYLPRRMA
MHALKRKAATSTTAGIPEKGDGPSENEARMRYKAVPPEQIREVLARRQRL
WDQQLAAARRKKKPVVPQVLPMEERENVYRQRAKERARREQEKPLSEEIK
QRPRRKNVPLAATVPVVPRSTNSFSLKTAHVRARLEKEKSDLKRQKQEEL
ARRTRQQAMSKTISDVMRRMDSQQTRLAHRPTAAEARQTARESQERYHVC
LKENKQKLEQATRDAPTLWERHDAEIRKEAAKRIALSTIAERVFGAGSVA
VERENWRGSTVDNFFDEEERALLCCAD* back to topmRNA from alignment at E_fasciculatus_S2_contig82:808..3791+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig82.16348.1 ID=mRNA_E_fasciculatus_S2_contig82.16348.1|Name=mRNA_E_fasciculatus_S2_contig82.16348.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2984bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig82:808..3791+ (Ectocarpus fasciculatus EfasUO2)
ATGATGCGTCCTGGATCCGCGGGAATAGGGGACCCACGAGACCATACTAC
TGGTGAAGGGAACACTGAACAAGAATTACTACTGAAAATTGGTCTCCTTG
CCAAGCATCATGCTAGAAACGTCCAAGCTCTCAACAGGTTGAGGAGCACC
AGCGCACCGCCGACAACGGCATGGGATCGTGTCGCCGTTCCACCACCGAT
CGAAGGCCCCAATCCTGTCCAACTTAGAAGACGAGTAACACCAAAGGGCA
ATCCTGAACAGAAAAGGACTCGTCCACACTGTCATTCATTCTCACCCGAC
CGCGTCTTCACTAGAGTTGTCGATTCTTCGGCGAGCAAGAAGAAGCTGCA
GCCCACAGTGGTTAAGCCGTTCCGCGGTATGGAGACTCATGTAGCCGCCT
GGACCAGGAAAATGAGGACGTATGAGGAGGTGAGCTAGTTTCCGTGGTGA
GGATATTAGGCTCGAATTGAAATGAAGCATCAGGTACGATGGGCTGGAAC
TGGAGCGTTGCCCCTGCTATGCGACTGGTGCGGTTGGTTGTGACCACAGC
GTCAGTATAACCCTAATAGGCAAATACTGTTCCGTAATATTGTCACCTGC
CACCAACCTCAAACCATCACCTTAGCTTGAGCTGCAAACGAAGAAGGACA
AGGAGGAAGCGAAGGCCAGAGATCGCGAGCGTCTCATCACGGCTATCAAT
GACGGAAGGGAGTTTTCCGGTGTCATTACTCGATCGAATGAGATGATGGC
GCGACGCCGACAAAAGGAGGTGAGCCACAAGATCCCGATGTTCCACGGCA
CCTTCCTTTGTGGCGGCGTGGGCGAGGAGAGTGTGGCATGTATTTAAGCA
TTTACCTTGGGAACATCAGTGGGTTAACACAAGAACCCTCGGACCCGCCC
TAAGTTGTGCTCCACACAAATCCATACAGATGTGTCACAATATCTGTTCT
CGTTGTTACGGTGGGCGAGCTGCATTTCTTTCGTTGATGTGTCGATGGCG
ATTTGAGACCTATTCGACCCGACGAAGAGTGCTGCTGAGCGATGGCAAAT
GCATGTACGTTGTAATGCCGACGATCACGTGACGATGCGGTGGGCACGGG
CAAATGTTTTGTGATTTGATGGGGCATAGAAATCCTTCCCCAACACAAAA
GCATGTTAGTGCATTGGAAGAAGAGCCATTCATTATCTCCTATATTTGGT
GTAGTTGCACGCTTGTAGCGGACGTACATGATGCGACGATACTATTACAC
AAGAGACCCGCTGCATGTTTTATTTTTTGATGCGAACGAATCCACTGGGT
GAAGCCAGAACATTCCTAACTGTGGGACTCGTTTCACGAAGCAGACAGAA
GCGGAGGATGACGAAGCAAGGCGAAGTCGTGAATTCAAGGCTCGCCCTCT
GCACATCGACAATGAGGACTGGCAAACAATCAAGGATAGACAAAGTTTAA
GGCGGAAGCAGAGGATCCAGATGCGGATGGACTTGGTGAGTGAGGTCGTC
AGTCTGGTGTGGCACCGTCAGCCCTGCCCCACCATCGTTCCCTCCTCCGC
CGACTGGCGACCGACAGGAGAAGCAGTGTTTTCTGGGACGAACTTGAGTA
CAAGAGTGGAACTGCATGTCATCTTTCCCGTTGTGGACGTGACGTGCTGT
GCTAATCGTGTGTGTTCTACTTGTACTGTAAACAGCTTTCCATCCTAAAA
ATCGGCACAGGTCCATATGATTTCGGACAGGTTTCATGACAACAATCGTG
TCGGCTGCAATTCCAACTTTTGGTCGCCCTGTGGCAGATGTCGTCTCTCT
CCTATCTCCCAAGGCGTATGGCGATGCATGCGCTGAAACGCAAGGCTGCA
ACGTCCACCACCGCCGGGATCCCTGAGAAAGGAGATGGCCCAAGTGAGAA
TGAAGCTCGCATGAGGTATAAAGCGGTTCCACCCGAGCAGATCCGAGAAG
TGTTGGCGAGAAGGCAGCGCCTATGGGATCAGCAGCTTGCTGCGGCCAGA
CGGAAAAAGAAACCGGTGGTACCTCAGGTGTGTTACCCCGTTCTCCTGTT
TATTTCAGTTCTTGGTCGGAGGCTGCACTCGTTGCAGCTCAGACAAATTA
GTAACCATCGTTTGTCAAACACTGGTCAACATGTGCCTGCTGTACCTATA
GGTTCTACCCATGGAAGAGAGGGAAAACGTATACCGACAAAGAGCAAAAG
AGCGCGCTCGACGGGAGCAAGAGAAACCTCTCTCGGAGGAAATCAAACAG
CGTCCTCGGAGGAAGAACGTGCCTTTAGCAGCTACCGTGCCCGTTGTACC
CCGCAGCACAAACAGCTTCTCTCTTAAGACGGCACACGTGCGAGCCAGGC
TGGAGAAAGAGAAGAGCGATCTCAAACGACAAAAACAAGAGGAGTTGGCG
AGGCGTACCAGGCAGCAAGCAATGAGCAAGACTATCTCTGACGTAATGAG
GCGGATGGATTCTCAGCAAACGAGACTAGCTCATCGACCGACAGCCGCTG
AGGCTCGTCAAACGGCCCGGGAATCTCAAGAAAGATATCATGTCTGTTTG
AAAGAGAACAAGCAGAAGCTGGAACAGGTGCGTGCTGATGCGCCAGCAGT
CGCTGTAAGGACTGCAGGTTGTGCCGAGCTCGCTTTCTTCGACTACTGGC
TGGGAGTTTACGACAACACATGACTTAGTGCAGACAAACACGCAATTTTT
GGCTGTTGACGAGAAAATGAGCATCAACGAGCCGCACTCCACAACAACCT
GATATGCACCACCCTTTCTTCGCTGCGCAGGCCACTCGCGATGCCCCTAC
ACTGTGGGAGAGGCACGACGCTGAGATTCGCAAGGAGGCAGCAAAACGTA
TCGCATTGTCGACTATCGCAGAAAGAGTATTTGGAGCTGGATCGGTGGCG
GTGGAGCGTGAAAACTGGAGGGGGTCTACTGTTGACAATTTTTTTGATGA
AGAAGAGCGTGCACTTTTGTGTTGTGCGGATTAG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig82:808..3791+ >mRNA_E_fasciculatus_S2_contig82.16348.1 ID=mRNA_E_fasciculatus_S2_contig82.16348.1|Name=mRNA_E_fasciculatus_S2_contig82.16348.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1584bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig82:808..3791+ (Ectocarpus fasciculatus EfasUO2)
ATGATGCGTCCTGGATCCGCGGGAATAGGGGACCCACGAGACCATACTAC
TGGTGAAGGGAACACTGAACAAGAATTACTACTGAAAATTGGTCTCCTTG
CCAAGCATCATGCTAGAAACGTCCAAGCTCTCAACAGGTTGAGGAGCACC
AGCGCACCGCCGACAACGGCATGGGATCGTGTCGCCGTTCCACCACCGAT
CGAAGGCCCCAATCCTGTCCAACTTAGAAGACGAGTAACACCAAAGGGCA
ATCCTGAACAGAAAAGGACTCGTCCACACTGTCATTCATTCTCACCCGAC
CGCGTCTTCACTAGAGTTGTCGATTCTTCGGCGAGCAAGAAGAAGCTGCA
GCCCACAGTGGTTAAGCCGTTCCGCGGTATGGAGACTCATGTAGCCGCCT
GGACCAGGAAAATGAGGACGTATGAGGAGCTTGAGCTGCAAACGAAGAAG
GACAAGGAGGAAGCGAAGGCCAGAGATCGCGAGCGTCTCATCACGGCTAT
CAATGACGGAAGGGAGTTTTCCGGTGTCATTACTCGATCGAATGAGATGA
TGGCGCGACGCCGACAAAAGGAGACAGAAGCGGAGGATGACGAAGCAAGG
CGAAGTCGTGAATTCAAGGCTCGCCCTCTGCACATCGACAATGAGGACTG
GCAAACAATCAAGGATAGACAAAGTTTAAGGCGGAAGCAGAGGATCCAGA
TGCGGATGGACTTGATGTCGTCTCTCTCCTATCTCCCAAGGCGTATGGCG
ATGCATGCGCTGAAACGCAAGGCTGCAACGTCCACCACCGCCGGGATCCC
TGAGAAAGGAGATGGCCCAAGTGAGAATGAAGCTCGCATGAGGTATAAAG
CGGTTCCACCCGAGCAGATCCGAGAAGTGTTGGCGAGAAGGCAGCGCCTA
TGGGATCAGCAGCTTGCTGCGGCCAGACGGAAAAAGAAACCGGTGGTACC
TCAGGTTCTACCCATGGAAGAGAGGGAAAACGTATACCGACAAAGAGCAA
AAGAGCGCGCTCGACGGGAGCAAGAGAAACCTCTCTCGGAGGAAATCAAA
CAGCGTCCTCGGAGGAAGAACGTGCCTTTAGCAGCTACCGTGCCCGTTGT
ACCCCGCAGCACAAACAGCTTCTCTCTTAAGACGGCACACGTGCGAGCCA
GGCTGGAGAAAGAGAAGAGCGATCTCAAACGACAAAAACAAGAGGAGTTG
GCGAGGCGTACCAGGCAGCAAGCAATGAGCAAGACTATCTCTGACGTAAT
GAGGCGGATGGATTCTCAGCAAACGAGACTAGCTCATCGACCGACAGCCG
CTGAGGCTCGTCAAACGGCCCGGGAATCTCAAGAAAGATATCATGTCTGT
TTGAAAGAGAACAAGCAGAAGCTGGAACAGGCCACTCGCGATGCCCCTAC
ACTGTGGGAGAGGCACGACGCTGAGATTCGCAAGGAGGCAGCAAAACGTA
TCGCATTGTCGACTATCGCAGAAAGAGTATTTGGAGCTGGATCGGTGGCG
GTGGAGCGTGAAAACTGGAGGGGGTCTACTGTTGACAATTTTTTTGATGA
AGAAGAGCGTGCACTTTTGTGTTGTGCGGATTAG back to top
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