mRNA_E_fasciculatus_S2_contig818.16330.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Match: Nonribosomal (peptide synthetase 10 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP2_ECTSI) HSP 1 Score: 260 bits (664), Expect = 3.150e-78 Identity = 118/121 (97.52%), Postives = 121/121 (100.00%), Query Frame = 1
Query: 1 DRLPSWQASLCMDDDGEWIKTAKEAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYTEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 363
DRLPSWQA+LCMDDDGEWIKTA+EAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPY+EGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP
Sbjct: 231 DRLPSWQATLCMDDDGEWIKTAREAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYSEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 351
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN6_9PHAE) HSP 1 Score: 236 bits (603), Expect = 2.010e-71 Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 1
Query: 34 MDDDGEWIKTAKEAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYTEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 363
MDDDGEWIKTA+EAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPY+EGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP
Sbjct: 1 MDDDGEWIKTAREAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYSEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 110
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Match: Carrier (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXF7_9STRA) HSP 1 Score: 156 bits (395), Expect = 6.880e-42 Identity = 78/120 (65.00%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 4 RLPSWQASLCMDDDGEWIKTAKEAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYTEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 363
RLP+WQ +L ++ D A+ PP+P D PDDLAYVVMSSGTTG PKGICCPHRGAVHSY RLVN PY DR A HVFFVWELLRPLLG VPLYVIPDD IYDP
Sbjct: 394 RLPAWQEALELNADWREALAARSVPPMPADRERTRPDDLAYVVMSSGTTGVPKGICCPHRGAVHSYDWRLVNCPYAPDDRVASHVFFVWELLRPLLGN--------VPLYVIPDDTIYDP 505
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAS9_HYAAE) HSP 1 Score: 152 bits (385), Expect = 7.080e-41 Identity = 74/120 (61.67%), Postives = 86/120 (71.67%), Query Frame = 1
Query: 4 RLPSWQASLCMDDDGEWIKTAKEAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYTEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 363
RLP+WQ +L MD++ I + P +P D A+ P DLAYVVMSSGTTG PKGICCPHRGAVHSYH RL + P+ E DR ACHVFFVWELLRP+LG PLY+IPD+ IYDP
Sbjct: 382 RLPAWQHALEMDENWLDILARQNIPAMPADRAVTHPGDLAYVVMSSGTTGVPKGICCPHRGAVHSYHWRLTHCPFKEDDRVACHVFFVWELLRPMLGNR--------PLYIIPDNIIYDP 493
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Match: Carrier (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WR86_GLOUD) HSP 1 Score: 152 bits (384), Expect = 2.090e-40 Identity = 75/120 (62.50%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 4 RLPSWQASLCMDDDGEWIKTAKEAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYTEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 363
RLP WQ +L +D D A+ PP+P D PDDLAYVVMSSGTTG PKGICCPHRGAVHSY RLVN P+ DR A HVFFVWELLRP+LG PLY+IPDD IYDP
Sbjct: 402 RLPEWQETLNLDSDWLDALRARNVPPMPVDRVRTQPDDLAYVVMSSGTTGVPKGICCPHRGAVHSYDWRLVNCPFIAHDRVASHVFFVWELLRPMLGNK--------PLYIIPDDTIYDP 513
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Match: Carrier (domain-containing protein n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4S739_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.340e-39 Identity = 74/122 (60.66%), Postives = 86/122 (70.49%), Query Frame = 1
Query: 4 RLPSWQASLCMDDDGEWIK--TAKEAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYTEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 363
RLP+WQ +L +DD W++ + + P +P D PDDLAYVVMSSGTTG PKGICCPHRGAVHSY+ RL + PY E DR ACHVFFVWELLRP+LG PLY+IPD IYDP
Sbjct: 394 RLPAWQQALELDDG--WLENLSKRNIPVMPADRTRTHPDDLAYVVMSSGTTGVPKGICCPHRGAVHSYNWRLTHCPYKEDDRMACHVFFVWELLRPMLGNR--------PLYIIPDSTIYDP 505
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Match: Carrier (domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD90_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.340e-39 Identity = 74/120 (61.67%), Postives = 81/120 (67.50%), Query Frame = 1
Query: 4 RLPSWQASLCMDDDGEWIKTAKEAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYTEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 363
RLP+WQ L +DD K P +P PDDLAYVVMSSGTTG PKGICCPHRGAVHSYH RL + PY E DR ACHVFFVWELLRP+LG PLY+IPD+ IYDP
Sbjct: 397 RLPAWQQVLELDDGWLDALAQKSIPAMPAGRTRTHPDDLAYVVMSSGTTGIPKGICCPHRGAVHSYHWRLTHCPYKEDDRVACHVFFVWELLRPMLGNR--------PLYIIPDNAIYDP 508
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Match: Uncharacterized (protein n=6 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EZV8_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.370e-39 Identity = 74/122 (60.66%), Postives = 86/122 (70.49%), Query Frame = 1
Query: 4 RLPSWQASLCMDDDGEWIK--TAKEAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYTEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 363
RLP+WQ +L +DD W++ + + P +P D PDDLAYVVMSSGTTG PKGICCPHRGAVHSY+ RL + PY E DR ACHVFFVWELLRP+LG PLY+IPD IYDP
Sbjct: 394 RLPAWQQALELDDG--WLENLSKRNIPVMPADRTRTHPDDLAYVVMSSGTTGVPKGICCPHRGAVHSYNWRLTHCPYKEDDRMACHVFFVWELLRPMLGNR--------PLYIIPDSTIYDP 505
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Match: Carrier (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7P1_PHYRM) HSP 1 Score: 149 bits (376), Expect = 2.480e-39 Identity = 75/122 (61.48%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 4 RLPSWQASLCMDDDGEWIKTA--KEAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYTEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 363
RLP+WQ +L +DD W+++ + P +P D PDDLAYVVMSSGTTG PKGICCPHRGAVHSY RL + PY E DR ACHVFFVWELLRP+LG PLYVIPD IYDP
Sbjct: 389 RLPAWQQALELDDG--WLESLAQRNIPVMPADRTRTHPDDLAYVVMSSGTTGVPKGICCPHRGAVHSYDWRLKHCPYKEDDRVACHVFFVWELLRPMLGNR--------PLYVIPDSSIYDP 500
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Match: Carrier (domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G5AF40_PHYSP) HSP 1 Score: 149 bits (376), Expect = 2.500e-39 Identity = 75/122 (61.48%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 4 RLPSWQASLCMDDDGEWIKTA--KEAPPVPQDAALPSPDDLAYVVMSSGTTGAPKGICCPHRGAVHSYHHRLVNFPYTEGDREACHVFFVWELLRPLLGGMESAGGVAVPLYVIPDDHIYDP 363
RLP WQ +L +DD W+++ + P +P D PDDLAYVVMSSGTTG PKGICCPHRGAVHSY RL + PY E DR ACHVFFVWELLRP+LG PLYVIPD+ IYDP
Sbjct: 392 RLPGWQQALELDDG--WLESLARQNIPSMPLDRTRTHPDDLAYVVMSSGTTGVPKGICCPHRGAVHSYDWRLTHCPYKEDDRVACHVFFVWELLRPMLGNR--------PLYVIPDNTIYDP 503 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig818.16330.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig818.16330.1 >prot_E_fasciculatus_S2_contig818.16330.1 ID=prot_E_fasciculatus_S2_contig818.16330.1|Name=mRNA_E_fasciculatus_S2_contig818.16330.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=121bp DRLPSWQASLCMDDDGEWIKTAKEAPPVPQDAALPSPDDLAYVVMSSGTTback to top mRNA from alignment at E_fasciculatus_S2_contig818:236..1115- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig818.16330.1 ID=mRNA_E_fasciculatus_S2_contig818.16330.1|Name=mRNA_E_fasciculatus_S2_contig818.16330.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=880bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig818:236..1115- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig818:236..1115- >mRNA_E_fasciculatus_S2_contig818.16330.1 ID=mRNA_E_fasciculatus_S2_contig818.16330.1|Name=mRNA_E_fasciculatus_S2_contig818.16330.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=363bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig818:236..1115- (Ectocarpus fasciculatus EfasUO2)back to top |