mRNA_E_fasciculatus_S2_contig8167.16320.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8167.16320.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y2_ECTSI) HSP 1 Score: 1226 bits (3171), Expect = 0.000e+0 Identity = 999/1233 (81.02%), Postives = 1030/1233 (83.54%), Query Frame = 1
Query: 58 MSGMSLASLGSLSRSRSTKRLGGLFDVDEALDDSRAWRNYFLLQHGPAGLSESGSDVVAELMGKPRAGNPVGAGVEAAIAGAACSSAGGANAKRDTEGAGVXXXXXXXXXXXXXXXXXAVGDGDDLPSPPACVDGRGRVQDLSQRVAELRQQSYNRRLMVTAATGPPRGRAAPPPLPVGVNLAPDEAPAAAPSELKLSPSSVAQRVPPSGGGVPGAKAAAVDAGYSDSLLEGSGGGGRGVDSSDGXXKGRVKGRRRKAAASFIRKIGLAATGRQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGAEGSLTSGSWSADSSLQGGAGAGSAVKRSGLRGRIGQVWNSRRKVDRRDSVSKERAGELPEEQGMDRGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TSPLGRSFDPNQPLLSGSVDDSNVSLPPQFGTAANSLGAS---FDPNRSTRSWFDTSADSQARVPPEVPPDLWLEQQPQHGALAPLAVEQQRVVPPTSRPWSEAERETAAAAAAGIALATGATMSVGSMERGGPSVSISPAREVGXXXXXXXXXXXXXXXXXXVLARPTFDEDMLVAELSDLSVSGGGGESNDNDGSSAS-MCLGNATGEQQQGRVWPNCAAAGEGRGALAXXXXXXXXXXTAADWSRPTQRQREAMQALQWPAAQQGGVPLGGDTAGVGAAPAHP-MGLAPQSTGARASSAESGMDPILGQAPTMAPSLQFSGGSPRSQSVDVGMLSHKAQPRGDSGTAAVHTGWGVDSGXXXXXXXXXXDERLSRAMGSWPHQGVGANVFTRSSSGXXXXXXXXXXXXXDGTRSLARSGLVVSSGNSLQRSVSVDTSASGVPHGSHRGXXXXXXXVRG---TGAQFASLRALQQEGAGAGGFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSWSALHAMIPLPGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGXXXXXX---EDDGTSRRPSLPTSSNGVFADGGAAALVRGGGSDAGSTDGVDGGRRRR-LSARSWRAALPTFRHSKEPTAAGSDTLDMSVQDKMDEVLLKRRLNSSRSVDLSVGNHKKQCLDSLGPPVTPAGEAAAAAPGTADKSTAAGTTNPTAFEPFDFLRGLGGXXXXXXXXXXXXXXXTGAGTKPSAGVPIAIAPKGDLPSAAG 3711
MSGMSLASLGSLSRSRSTKRLGGLFDVDEALDDSRAWRNYFLLQHGPAGLSESGSDVVAELMGKPRAGN VGAG E +AG A S+ XXXXXXXXXXXXXXXXX D PSPPACVDGRGRVQDLSQRVAELRQQSY+RRLM TAA GPPRGRAAPPPLPVGVNLAPDE PA +PSE KLSP SVAQRVPPSG VPGAKAAAVDAGY DS+LEGSGGGGRGVDSS XXKGRVKGRRRKAAASFIRKIGLAATGRQH XXXXXXXX AEGSLTSGSWSADSS QGG SAVKR+GLRGR+GQVW+SRRKVDRRDS SKERAGEL Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TSPLGRSFDPNQPLLSGSVDDSNVSLPPQFGTAANSLGAS FDPNRSTRSWFDTSA+SQARVPPEVPP LW+E QPQHGALAPLAV QQ VPPTSRPWSEAERETAAAAAAGIALAT ATMSVGS ERGGPSVSISPA++ XXXXXXXXXXXXXXXXXX+LARPTFDE++LVAELSDLSVSGGG E N DGSS MCLG+ATGEQQQGR+WPNCAA GEG XXXXXX ADWSRP Q+QREAMQ L+WPAAQQ VP GDTA PAHP MGL+PQSTGAR SAESG+DP+LGQAPT AP+LQFSGGS RSQSVDVGMLSHK Q R DSGTAA HTGWGVD GXXXXX D RLSRAMGSWPHQGV ANV TRSS XXXXX TRSL+RSGL+ SSG LQRSVSVDTSASGVPHGSHRG XXXXX TGAQFASLRALQQE AG GGF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSWSALHAMIPLPGMXXXXXXXXXXXXXXXXXXXXXXXXX ASGXXXXXX +DDG+SRRPSLPTS+ GVFADG AAL AGSTDGVDGGRRRR LS RSWRAALPTFRHSKEP AAGSDTLDMSVQD MDE+ LKRRLNSSRS+DLSVGNHKKQCLD LGPP PAGE+ AA PGTAD AAG TNPTAFEPFDFLRGLGGXXXXXXXXXXXXXX T AGTKPSAGVPIAIAPKGDLPSAAG
Sbjct: 1 MSGMSLASLGSLSRSRSTKRLGGLFDVDEALDDSRAWRNYFLLQHGPAGLSESGSDVVAELMGKPRAGNSVGAGAEDTVAGGATSAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTPSPPACVDGRGRVQDLSQRVAELRQQSYSRRLMATAAVGPPRGRAAPPPLPVGVNLAPDETPATSPSEPKLSPGSVAQRVPPSGV-VPGAKAAAVDAGYGDSMLEGSGGGGRGVDSSXXXXKGRVKGRRRKAAASFIRKIGLAATGRQHQQHQSEGGSLESSAHSGSNNXXXXXXXXXXXXAEGSLTSGSWSADSSSQGG----SAVKRAGLRGRLGQVWSSRRKVDRRDSGSKERAGELMRPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLGRSFDPNQPLLSGSVDDSNVSLPPQFGTAANSLGASNASFDPNRSTRSWFDTSAESQARVPPEVPPGLWVEPQPQHGALAPLAVGQQ-TVPPTSRPWSEAERETAAAAAAGIALATSATMSVGSTERGGPSVSISPAQQA-XXXXXXXXXXXXXXXXXXLLARPTFDENLLVAELSDLSVSGGG-EGNGQDGSSVGGMCLGDATGEQQQGRMWPNCAAGGEGXXXXXXXXXXX------ADWSRPNQQQREAMQGLRWPAAQQRSVPPNGDTA-----PAHPPMGLSPQSTGARGISAESGIDPMLGQAPTTAPTLQFSGGSTRSQSVDVGMLSHKGQSRDDSGTAAAHTGWGVDGGXXXXX-----DGRLSRAMGSWPHQGVDANVVTRSSXXXXXXX----------TRSLSRSGLIASSGGPLQRSVSVDTSASGVPHGSHRGGGXXXXXXXXEGRTGAQFASLRALQQEAAGTGGFVPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSWSALHAMIPLPGMXXXXXXXXXXXXXXXXXXXXXXXXXLPLPASGXXXXXXXXXDDDGSSRRPSLPTSTTGVFADG-TAALAGXXXXXAGSTDGVDGGRRRRRLSGRSWRAALPTFRHSKEPAAAGSDTLDMSVQDNMDEMFLKRRLNSSRSLDLSVGNHKKQCLDGLGPPAAPAGESTAATPGTADTCNAAGATNPTAFEPFDFLRGLGGXXXXXXXXXXXXXXSTVAGTKPSAGVPIAIAPKGDLPSAAG 1198
BLAST of mRNA_E_fasciculatus_S2_contig8167.16320.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z9_9PHAE) HSP 1 Score: 1130 bits (2923), Expect = 0.000e+0 Identity = 925/1316 (70.29%), Postives = 968/1316 (73.56%), Query Frame = 1
Query: 1 LASTAAGSRHASRDESSLSMSGMSLASLGSLSRSRSTKRLGGLFDVDEALDDSRAWRNYFLLQHGPAGLSESGSDVVAELMGKPRAGNPVGAGVEAAIAGAACSSAGGANAKRDTEGAGVXXXXXXXXXXXXXXXXX----------AVGDGDDLPSPPACVDGRGRVQDLSQRVAELRQQSYNRRLMVTAATGPPRGRAAPPPLPVGVNLAPDEAPAAAPSELKLSPSSVAQRVPPSGGGVPGAKAAAVDAGYSDSLLEGSGGGGRGVDSSDGXXKGRVKGRRRKAAASFIRKIGLAATGRQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGAEGSLTSGSWSADSSLQGGAG-------------------------------------------------------AGSAVKRSGLRGRIGQVWNSRRKVDRRDSVSKERAGELPEEQGMDRGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TSPLGRSFDPNQPLLSGSVDDSNVSLPPQFGTAANSLGAS---FDPNRSTRSWFDTSADSQARVPPEVPPDLWLEQQPQHGALAPLAVEQQRVVPPTSRPWSEAERETAAAAAAGIALATGATMSVGSMERGGPSVSISPAREVGXXXXXXXXXXXXXXXXXXVLARPTFDEDMLVAELSDLSVSGGGGESNDNDGSSAS-MCLGNATGEQQQGRVWPNCAAAGEGRGALAXXXXXXXXXXTAADWSRPTQRQREAMQALQWPAAQQGGVPLGGDTAGVGAAPAHP-MGLAPQSTGARASSAESGMDPILGQAPTMAPSLQFSGGSPRSQSVDVGMLSHKAQPRGDSGTAAVHTGWGVDSGXXXXXXXXXXDERLSRAMGSWPHQGVGANVFTRSSSGXXXXXXXXXXXXXDGTRSLARSGLVVSSGNSLQRSVSVDTSASGVPHGSHRGXXXXXXXVRGTGAQFASLRALQQEGAGAGGFARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSWSALHAMIPLPGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGXXXXXXEDDGTSRRPSLPTSSNGVFADGGAAALVRGGGSDAGSTDGVDGGRRRRLSARSWRAALPTFRHSKEPTAAGSDTLDMSVQDK--MDEVLLKRRLNSSRSVDLSVGNHKKQCLDSLGPPVTPAGEAAAAAPGTADKS------TAAGTTNPTAFEPFDFLRGLGGXXXXXXXXXXXXXXXTGAGTKPSAGVPIAIAPKGDLPSAAG 3711
LASTAA RHASRDESSLSMSGMSLASLGSLSRSRSTKRLGGLFDVDEALDDS+AWRNYFLLQHGPAGLSESG+DVVAELMGKP AGNPVGAG EA + G A SAGGA+AK + G XXXXXXXXXXXXX A G+GDD+PSPPACVDGRGRVQDLS+RVAELRQQSY+RRLM TAA GPPRGRA+PPPLPVGVNLAPDE P A+PSE KLSP SVAQRVPPSG V AK AVDAG +S+LEGSGGG XX GRVKGRRRKAAASFIRKIGLAATGRQH XXXXXXXXXX AEG+LTSGSW AD S QGG G AGSAVKR+GLRGR+GQVW+SRRKVDR D KERAGEL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TSPLGRSFDPNQPLLSGSVDDSNVSLPPQFGTAANSLGAS FDPNRSTRSWFDTSA+SQARVPPE P LW+E QPQHG LAPLAVEQ R V PTSRPWSEAERE AAAAA GIA GAT+SVGS ERGGPSVSISPAR G XXXXXXXXXXXXX VLARPTFDE +LVAELSDLSVS GG ESN DGS+ +CLG+ATGEQQQGR+WPNCAAAGE XXXXXXXXXX ADWSRP Q+QREAMQ L+W AAQQG P GDTA P HP MGLAPQS+GARA SAESGMDP+L QAPTM P+LQF GGS RSQSVDVGMLSHK+Q R DS TAA HTGWGVD G XX D RLSRAMGSWPHQG A+VFTRSS XXXXXX GTRSL+RSGL+VSS + LQRSVSVDTS SGVPH SHRG +GAQFASLRALQQE AG GGF XXXXXXXX RKSWSALHAMIPLPGMXXXXXXXXXXXXXXXXXX + XXXXXX DG SRRPSLPTS+NG FA+G A L GGGSDAGSTDGVDGGRRRRLS RSWR A PT RHSK P AAGSDTLDMSVQDK MDEV LKRRL SSRS+DLSVGNHK+QCLD LGPP PAGE+ AAGTTNP+AFEPFDFLRGLGGXXXXXXXXXXXX T AGTKP AGVPIAIAPKGDLP AAG
Sbjct: 83 LASTAAAGRHASRDESSLSMSGMSLASLGSLSRSRSTKRLGGLFDVDEALDDSKAWRNYFLLQHGPAGLSESGNDVVAELMGKPCAGNPVGAGAEATVVGGA-RSAGGADAKVEDAGVATAGGAXXXXXXXXXXXXXXXXXXAATVVAEGEGDDIPSPPACVDGRGRVQDLSERVAELRQQSYSRRLMATAAVGPPRGRASPPPLPVGVNLAPDETPPASPSEPKLSPGSVAQRVPPSGV-VQVAKLTAVDAGSGESMLEGSGGGXXXXXXXXXXXXGRVKGRRRKAAASFIRKIGLAATGRQHQQHQSEGGSLESSAHSGSXXXXXXXXXXXXXXAEGALTSGSWGADRSSQGGTGGSNTLPYTRSGSDPRSTQAFPNSPSLAAPEPLARGASVGLGALAESSAAATAALAAGSAVKRAGLRGRLGQVWSSRRKVDRSDCGGKERAGELMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLGRSFDPNQPLLSGSVDDSNVSLPPQFGTAANSLGASNASFDPNRSTRSWFDTSAESQARVPPEFPSGLWVEPQPQHGVLAPLAVEQ-RGVAPTSRPWSEAEREAAAAAAXGIAXXAGATISVGSTERGGPSVSISPARHGGGGXXXXXXXXXXXXXA--VLARPTFDEKLLVAELSDLSVSCGG-ESNGQDGSNVGGVCLGDATGEQQQGRMWPNCAAAGE------XXXXXXXXXXXXADWSRPNQQQREAMQGLRWTAAQQGSGPPNGDTA-----PTHPPMGLAPQSSGARAVSAESGMDPMLDQAPTMPPTLQFGGGSTRSQSVDVGMLSHKSQSRDDSRTAAAHTGWGVDGGGXXG------DGRLSRAMGSWPHQGADADVFTRSSX--------XXXXXXXGTRSLSRSGLIVSSRSPLQRSVSVDTSVSGVPHWSHRGDGGGGSREEVSGAQFASLRALQQEAAGTGGFV---PXXXXXXXXLALDGDDRMHAPTLSGGGGALEGGQKNQHHQHRKSWSALHAMIPLPGMXXXXXXXXXXXXXXXXXXRRFTLPLL----ASXXXXXXXXDGQSRRPSLPTSTNGFFANG-TAGLAGGGGSDAGSTDGVDGGRRRRLSGRSWREAFPTLRHSKGPAAAGSDTLDMSVQDKIKMDEVFLKRRLASSRSLDLSVGNHKRQCLDGLGPPAAPAGESXXXXXXXXXXXXXXXXXNAAGTTNPSAFEPFDFLRGLGGXXXXXXXXXXXXSS-TVAGTKPPAGVPIAIAPKGDLPPAAG 1358 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8167.16320.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8167.16320.1 >prot_E_fasciculatus_S2_contig8167.16320.1 ID=prot_E_fasciculatus_S2_contig8167.16320.1|Name=mRNA_E_fasciculatus_S2_contig8167.16320.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1237bp LASTAAGSRHASRDESSLSMSGMSLASLGSLSRSRSTKRLGGLFDVDEALback to top mRNA from alignment at E_fasciculatus_S2_contig8167:1533..6907+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8167.16320.1 ID=mRNA_E_fasciculatus_S2_contig8167.16320.1|Name=mRNA_E_fasciculatus_S2_contig8167.16320.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5375bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8167:1533..6907+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8167:1533..6907+ >mRNA_E_fasciculatus_S2_contig8167.16320.1 ID=mRNA_E_fasciculatus_S2_contig8167.16320.1|Name=mRNA_E_fasciculatus_S2_contig8167.16320.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=3711bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8167:1533..6907+ (Ectocarpus fasciculatus EfasUO2)back to top |