mRNA_E_fasciculatus_S2_contig8154.16309.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU8_ECTSI) HSP 1 Score: 290 bits (742), Expect = 3.270e-96 Identity = 153/189 (80.95%), Postives = 164/189 (86.77%), Query Frame = 3
Query: 303 MVYATSIDGSVVHATATGTPPGNLEDRTIDSVPQTRRTLLEANARRMAKVEGLRAEVMAGREQAEKAAVEGRVLKKSKMVTVLGLLPFGKHGFRRRRARAHAAAHMGEATLSVTNRGDLEVSVDGLIVLRKSGPSWFGFRKKDQSYEVRVTEDGVVVSRGGEYDWGIQVQD-LEEVVPATISFFDMYPD 866
MVYATSIDGSVVHATATGTPPG+LEDRTID V TRRTLLEA R M+KVEGLRAE+M RE+AEK AVEGR L KSKMVTVLG LPFGKHGFRRRRAR HAAAH+GEATLSVTN GDLEVSVDG +VLRKSGPSWFGFR+KD +YEVRVTEDGV VSRGGEY WGIQ ++ L +VVP TI F D YPD
Sbjct: 1 MVYATSIDGSVVHATATGTPPGDLEDRTIDPVSLTRRTLLEAIPRCMSKVEGLRAEIMEEREEAEKEAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNTGDLEVSVDGFLVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGEYAWGIQAREPLAQVVPTTICFSDKYPD 189
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM4_ECTSI) HSP 1 Score: 297 bits (761), Expect = 8.790e-95 Identity = 155/192 (80.73%), Postives = 172/192 (89.58%), Query Frame = 3
Query: 294 QTTMVYATSIDGSVVHATATGTPPGNLEDRTIDSVPQTRRTLLEANARRMAKVEGLRAEVMAGREQAEKAAVEGRVLKKSKMVTVLGLLPFGKHGFRRRRARAHAAAHMGEATLSVTNRGDLEVSVDGLIVLRKSGPSWFGFRKKDQSYEVRVTEDGVVVSRGGEYDWGIQVQD-LEEVVPATISFFDMYPD 866
+T MVYATSIDGSVVHATATGTPPG+LEDR+ID V QTRRTLLEAN +RM+ VEGLRAE++A E+AEKAAVEG+ LK+SKMVTVLG LPFGKHGFRRRRAR AAAH+GEA LSVTN+GDLEVSVDG IVLRKSGPSWFGFRKKD +YEVRVTEDGVVVSRGG+YDWGIQ ++ L +VVPAT F DMYPD
Sbjct: 310 ETAMVYATSIDGSVVHATATGTPPGDLEDRSIDPVSQTRRTLLEANPQRMSIVEGLRAEIVAETEEAEKAAVEGQGLKRSKMVTVLGFLPFGKHGFRRRRARERAAAHLGEAALSVTNKGDLEVSVDGSIVLRKSGPSWFGFRKKDSTYEVRVTEDGVVVSRGGKYDWGIQAREPLAQVVPATTCFCDMYPD 501
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ9_9PHAE) HSP 1 Score: 257 bits (657), Expect = 1.350e-81 Identity = 138/181 (76.24%), Postives = 153/181 (84.53%), Query Frame = 3
Query: 276 RLPNAAQTTMVYATSIDGSVVHATATGTPPGNLEDRTIDSVPQTRRTLLEANARRMAKVEGLRAEVMAGREQAEKAAVEGRVLKKSKMVTVLGLLPFGKHGFRRRRARAHAAAHMGEATLSVTNRGDLEVSVDGLIVLRKSGPSWFGFRKKDQSYEVRVTEDGVVVSRGGEYDWGIQVQDL 818
RLPN A+T MVYATSID VV ATATGTPPG+LEDRT+D QTRRTLLEAN +RM+ VEGL+AE+MA +AEK VEGR LKKSKMV VLG LPFGKHGFRRRR R HAAAH+GEATLSVTN+GDLEVSVDG IVL KSGPSWFGFRKKD +YEVRVTE V+VS+GG +DWGIQ + L
Sbjct: 131 RLPNLAKTAMVYATSIDCFVVRATATGTPPGDLEDRTVDPASQTRRTLLEANTQRMSIVEGLQAEIMAETAEAEKETVEGRGLKKSKMVAVLGFLPFGKHGFRRRRPREHAAAHLGEATLSVTNKGDLEVSVDGSIVLGKSGPSWFGFRKKDFTYEVRVTEGVVMVSQGG-HDWGIQARKL 310
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E6_9PHAE) HSP 1 Score: 233 bits (594), Expect = 5.020e-71 Identity = 129/198 (65.15%), Postives = 145/198 (73.23%), Query Frame = 3
Query: 276 RLPNAAQTTMVYATSIDGSVVHATATGTPPGNLEDRTIDSVPQTRRTLLEANARRMAKVEGLRAEVMAGREQAEKAAVEGRVLKKSKMVTVLGLLPFGKHGFRRRRARAHAAAHMGEATLSVTNRGDLEVSVDGLIVLRKSGPSWFGFRKKDQSYEVRVTEDGVVVSRGGEYDWGIQVQD-LEEVVPATISFFDMYPD 866
+LPNAA+T MVYATSIDGSVVHATATG P G+LEDRTI++V T VE A+EGR+LKKS MVTVLG LPFGKHGFRRR AR HAAAH+GEATLSVTN GDLEVSVDG IVLRK GPSWFGFR+K +YEVRVT+DGV VS+GG+YD GIQ ++ L +VVP TI F D YPD
Sbjct: 218 KLPNAAKTAMVYATSIDGSVVHATATGRPSGDLEDRTIETVSPTH-------------VE----------------AIEGRILKKSNMVTVLGFLPFGKHGFRRRPARKHAAAHIGEATLSVTNEGDLEVSVDGFIVLRKPGPSWFGFRQKYSTYEVRVTKDGVAVSQGGKYDLGIQAREPLAQVVPTTICFCDKYPD 386
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T0_ECTSI) HSP 1 Score: 204 bits (518), Expect = 4.590e-63 Identity = 102/129 (79.07%), Postives = 113/129 (87.60%), Query Frame = 3
Query: 483 REQAEKAAVEGRVLKKSKMVTVLGLLPFGKHGFRRRRARAHAAAHMGEATLSVTNRGDLEVSVDGLIVLRKSGPSWFGFRKKDQSYEVRVTEDGVVVSRGGEYDWGIQVQD-LEEVVPATISFFDMYPD 866
R++AEK AVEGR L KSKMVTVLG LPFGKHGFRRRRAR H AAH+GEATLSVTN+GDLEVSVDG IVLRKS PSWFGFR+KD +YEVRVTEDGV VSRGG+YDWGIQ ++ L +VVP TI FFD YP+
Sbjct: 4 RDEAEKEAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHVAAHLGEATLSVTNKGDLEVSVDGSIVLRKSRPSWFGFRQKDSTYEVRVTEDGVAVSRGGKYDWGIQAREPLAQVVPTTICFFDKYPN 132
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDV1_9PHAE) HSP 1 Score: 202 bits (513), Expect = 1.420e-61 Identity = 102/182 (56.04%), Postives = 137/182 (75.27%), Query Frame = 3
Query: 276 RLPNAAQTTMVYATSIDGSVVHATATGTPPGNLEDRTIDSVPQTRRTLLEANARRMAKVEGLRAEVMAGREQAEKAAVEGRVL-KKSKMVTVLGLLPFGKHGFRRRRARAHAAAHMGEATLSVTNRGDLEVSVDGLIVLRKSGPSWFGFRKKDQSYEVRVTEDGVVVSRGGEYDWGIQVQDL 818
+L N A+T+M+YA+ IDGSV+HATA G P + +D VP + LL+AN+R+M GLR+E+ + KAA+EGR L K+ K+ T++G LPFGK+GFR RRAR HA AHMGEATLS+T +G+LEV+VDG+ VLRKSGPSWFGFRK D SYE+R TE+G+V+SR G++DW ++ D+
Sbjct: 3 KLLNPAKTSMLYASPIDGSVIHATANGKAPHDKDDDMTGQVPHGKHVLLKANSRKMLNALGLRSEIFEANLEKRKAALEGRELPKEGKVDTLMGFLPFGKNGFRGRRAREHAEAHMGEATLSLTKKGNLEVAVDGMTVLRKSGPSWFGFRKSDSSYELRATEEGIVISRQGKFDWSVKAGDI 184
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D4_9PHAE) HSP 1 Score: 197 bits (501), Expect = 7.510e-57 Identity = 105/181 (58.01%), Postives = 136/181 (75.14%), Query Frame = 3
Query: 276 RLPNAAQTTMVYATSIDGSVVHATATGTPPGNLEDRTIDSVPQTRRTLLEANARRMAKVEGLRAE-VMAGREQAEKAAVEGRVLKKSKMVTVLGLLPFGKHGFRRRRARAHAAAHMGEATLSVTNRGDLEVSVDGLIVLRKSGPSWFGFRKKDQSYEVRVTEDGVVVSRGGEYDWGIQVQD 815
RL N A+T+M YA+ DGSV+ ATA G P + + T V Q RTLL AN R+M+KV LR+E ++AG E+ ++ A EGR L++ K+ T++G +PFGKHGF RRRAR H A+MGEATLS+TN+G L VSVDG++VLRKSGP FGFR+ D+SYE+RVTE GVV+SR G YDWG++ QD
Sbjct: 240 RLLNPARTSMAYASPTDGSVILATAIGNAPRDADGNTTGPVTQNNRTLLTANPRKMSKVRALRSENIVAGLEK-KRVAREGRTLREGKLATLMGFMPFGKHGFLRRRAREHVEAYMGEATLSITNKGGLGVSVDGIVVLRKSGPYCFGFRRTDRSYELRVTEAGVVISRRGMYDWGLKAQD 419
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B0_ECTSI) HSP 1 Score: 196 bits (497), Expect = 1.430e-55 Identity = 96/151 (63.58%), Postives = 121/151 (80.13%), Query Frame = 3
Query: 363 PGNLEDRTIDSVPQTRRTLLEANARRMAKVEGLRAEVMAGREQAEKAAVEGRVLKKSKMVTVLGLLPFGKHGFRRRRARAHAAAHMGEATLSVTNRGDLEVSVDGLIVLRKSGPSWFGFRKKDQSYEVRVTEDGVVVSRGGEYDWGIQVQD 815
P + + T VPQ RTLL AN R+M+KV LR+E +A R + ++AA+EGR L++ K+ T++G LPFGKHGF RRRAR HA AHMGEATLS+T +G LEVSVDG++VLRKSGPSWFGFR+ D+SYE+RVTE+GVV+SR G YDWGI+ QD
Sbjct: 339 PRDADGNTTGPVPQKNRTLLTANPRKMSKVRALRSENIAARLEKKRAALEGRTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHMGEATLSITKKGGLEVSVDGIVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYDWGIKAQD 489
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM0_ECTSI) HSP 1 Score: 186 bits (472), Expect = 1.500e-55 Identity = 99/172 (57.56%), Postives = 124/172 (72.09%), Query Frame = 3
Query: 303 MVYATSIDGSVVHATATGTPPGNLEDRTIDSVPQTRRTLLEANARRMAKVEGLRAEVMAGREQAEKAAVEGRVLKKSKMVTVLGLLPFGKHGFRRRRARAHAAAHMGEATLSVTNRGDLEVSVDGLIVLRKSGPSWFGFRKKDQSYEVRVTEDGVVVSRGGEYDWGIQVQDL 818
MVYA DGSVV AT+TG P + E R S+PQ R TLL AN R MAK E R+E++ R + A EGR LKKSKM T +G LPFGK GF RRAR A AH+GEATL +T++G LEVSVDG +VLRK GPS+FGFR+ D SYE++VTE+G+ VSR G++ WG++ +D+
Sbjct: 1 MVYAAPADGSVVFATSTGRVPRDEEGRATGSLPQKRLTLLAANERLMAKAEDFRSEIILRRLVKKNALREGRTLKKSKMSTFMGFLPFGKRGFLHRRARDRAEAHLGEATLKLTSKGILEVSVDGTVVLRKKGPSYFGFRRTDPSYELQVTEEGIEVSRRGDFVWGVKAEDI 172
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A5_ECTSI) HSP 1 Score: 170 bits (430), Expect = 7.200e-50 Identity = 82/125 (65.60%), Postives = 104/125 (83.20%), Query Frame = 3
Query: 441 MAKVEGLRAEVMAGREQAEKAAVEGRVLKKSKMVTVLGLLPFGKHGFRRRRARAHAAAHMGEATLSVTNRGDLEVSVDGLIVLRKSGPSWFGFRKKDQSYEVRVTEDGVVVSRGGEYDWGIQVQD 815
M+KV LR+E +A R + +KAA+EG+ L++ K+ T++G LPFGKHGF RRRAR HA AH+GEATLS+T +G LEVSVDG +VLRKSGPSWFGFR+ D+SYE+RVTE+GV +SR G YDWGI+ QD
Sbjct: 1 MSKVRALRSENIAARLEKKKAALEGQTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHVGEATLSITKKGGLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVDISRRGMYDWGIKAQD 125 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8154.16309.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8154.16309.1 >prot_E_fasciculatus_S2_contig8154.16309.1 ID=prot_E_fasciculatus_S2_contig8154.16309.1|Name=mRNA_E_fasciculatus_S2_contig8154.16309.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=220bp MTEARNLRLLSLNLSRGIKNTTLPTTAATAAAAATAAAATPERRPDDHGVback to top mRNA from alignment at E_fasciculatus_S2_contig8154:5508..6921- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8154.16309.1 ID=mRNA_E_fasciculatus_S2_contig8154.16309.1|Name=mRNA_E_fasciculatus_S2_contig8154.16309.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1414bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8154:5508..6921- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8154:5508..6921- >mRNA_E_fasciculatus_S2_contig8154.16309.1 ID=mRNA_E_fasciculatus_S2_contig8154.16309.1|Name=mRNA_E_fasciculatus_S2_contig8154.16309.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=660bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8154:5508..6921- (Ectocarpus fasciculatus EfasUO2)back to top |