mRNA_E_fasciculatus_S2_contig8154.16308.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU9_ECTSI) HSP 1 Score: 381 bits (979), Expect = 5.340e-131 Identity = 179/189 (94.71%), Postives = 183/189 (96.83%), Query Frame = 2
Query: 275 EQRQGLEKKRKLNPLETLLMVYTQTSARTDARPDRQYPFFTGLPLKPYFDRPTVRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAPIAPTEECVRLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSFRVDGVLCEGERAPWEDEVGCKFFSSPIGGV 841
+++QGLEKKRKLNPLETLLMVYTQTSAR DARPDRQYPFFTGLPLKPYFDRPTVRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAP+APTEECV LVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSFRVDGVLCEGERAPWEDE CK FS PIGGV
Sbjct: 24 QEQQGLEKKRKLNPLETLLMVYTQTSARKDARPDRQYPFFTGLPLKPYFDRPTVRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAPVAPTEECVNLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSFRVDGVLCEGERAPWEDEFECKLFSPPIGGV 212
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K320_9PHAE) HSP 1 Score: 266 bits (680), Expect = 1.420e-85 Identity = 140/164 (85.37%), Postives = 145/164 (88.41%), Query Frame = 2
Query: 188 HRGGRAETSLAAGGGAPPTDSRQEAELQQEQRQGLEKKRKLNPLETLLMVYTQTSARTDARPDRQYPFFTGLPLKPYFDRPTVRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAPIAPTEECVRLVEELGEEVRYIVLPTTAFEHKVYVKPFSD 679
HR G AETSLAAGG APP DS+QE RQGLEKKRKLNPLETLLMVYTQTSARTDARPDRQYPF TGLPLKPYFDRPT+RTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAP+APTEECV LVEELGEEVRYIVLPTTA + YVK F+
Sbjct: 7 HRPGSAETSLAAGG-APPADSQQE-------RQGLEKKRKLNPLETLLMVYTQTSARTDARPDRQYPFLTGLPLKPYFDRPTLRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAPVAPTEECVNLVEELGEEVRYIVLPTTA-RVQPYVKEFAS 161
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YR97_NANGC) HSP 1 Score: 202 bits (514), Expect = 3.900e-60 Identity = 107/204 (52.45%), Postives = 128/204 (62.75%), Query Frame = 2
Query: 305 KLNPLETLLMVYTQTSA-----RTDA------RPDRQYPFFTGLPLKPYFDRPTVRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAPIAPTEECVRLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSFRVDGVLCEGE--------------RAPWEDEVGCKFFSSPIGGV 841
K NPL TL VYT+ S +D+ R +RQY TGLPLKPYF+R TVR +I +W FEQPQ FFNV+ IRMT +RL G LWVHAP+A T EC RLV+ELG +V YIVLPTTAFEHKV+V F+ +P A+VYACPGQWSWPINLPP FRVD L + + PW +E+ F P G+
Sbjct: 66 KPNPLATLFEVYTRGSGDNAGVASDSPEEIRLRKERQYTLITGLPLKPYFERRTVR-RQIAKDIWTFEQPQGFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGI 268
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U319_9STRA) HSP 1 Score: 202 bits (514), Expect = 3.010e-58 Identity = 107/204 (52.45%), Postives = 128/204 (62.75%), Query Frame = 2
Query: 305 KLNPLETLLMVYTQTSA-----RTDA------RPDRQYPFFTGLPLKPYFDRPTVRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAPIAPTEECVRLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSFRVDGVLCEGE--------------RAPWEDEVGCKFFSSPIGGV 841
K NPL TL VYT+ S +D+ R +RQY TGLPLKPYF+R TVR +I +W FEQPQ FFNV+ IRMT +RL G LWVHAP+A T EC RLV+ELG +V YIVLPTTAFEHKV+V F+ +P A+VYACPGQWSWPINLPP FRVD L + + PW +E+ F P G+
Sbjct: 63 KPNPLATLFEVYTRGSGDNAGVASDSPEEIRLRKERQYTLITGLPLKPYFERRTVR-RQIAKDIWTFEQPQGFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGI 265
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIS2_9STRA) HSP 1 Score: 200 bits (508), Expect = 8.320e-58 Identity = 101/193 (52.33%), Postives = 127/193 (65.80%), Query Frame = 2
Query: 311 NPLETLLMVYTQTSARTDARPDRQYPFFTGLPLKPYFDRPTVRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAPIAPTEECVRLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSFRVDGVLCEG----------------ERAPWEDEVGCKFFSSPIGGV 841
+P +TL+ +Y+ T DR+Y TGLPLKP+F+R T R + G MW FEQ Q FFNVS NIRMTAV+L GGLWVHAP+APT EC RL+ E+GE V +IVLPTTA EHKVY++ F+ +P+AQV+ CPGQWSWPINLP FRVDG+L + E PW D++ FS P+ G+
Sbjct: 65 SPWQTLVDMYSGTKT---THSDREYRLITGLPLKPFFERETRRYDAGQG-MWTFEQEQAFFNVSTNIRMTAVQLPSGGLWVHAPVAPTLECQRLLREVGE-VEHIVLPTTALEHKVYMRDFTRAYPKAQVWVCPGQWSWPINLPLRFRVDGMLVKKIHIPPRPIKLAPSLAQETPPWADDIDLALFSPPVMGL 252
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Match: Na(+)/H(+) (antiporter nhaA (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XFD8_9ARAE) HSP 1 Score: 185 bits (470), Expect = 6.000e-52 Identity = 92/179 (51.40%), Postives = 121/179 (67.60%), Query Frame = 2
Query: 329 LMVYTQTSARTDARPDRQYPFFTGLP--LKPYFDRPTVRTEEIPGVMWAFEQPQE--FFNVSVNIRMTAVRLEGGGLWVHAPIAPTEECVRLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSF----RVDGVLCEGERAPWEDEVGCKFFSSPIGGV 841
L+V + +S + A +R Y FTG P L P+ +R T+RTE + G +W FEQ Q F +VS NIRMT ++L+ GGLWVHAPIAPT+EC++LV+ELG V YIVLPT A+EHK++V PFS +FP+AQ++ P QWSWPINLP F R + E APW +E+ K SSP G+
Sbjct: 63 LVVASASSGTSSASSERFYLNFTGFPFPLGPFLNRRTIRTEAVKGCIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLVKELGAPVEYIVLPTFAYEHKIFVAPFSRKFPQAQIWVAPRQWSWPINLPLEFFGIFRAKPLKDEDTSAPWANEIEQKVLSSPEVGI 241
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Match: Uncharacterized (protein n=1 Tax=Glycine soja TaxID=3848 RepID=A0A0B2SV64_GLYSO) HSP 1 Score: 178 bits (452), Expect = 3.000e-51 Identity = 91/182 (50.00%), Postives = 121/182 (66.48%), Query Frame = 2
Query: 323 TLLMVYTQTSARTDARPDRQYPF-FTGLP--LKPYFDRPTVRTEEIPGVMWAFEQPQE--FFNVSVNIRMTAVRLEGGGLWVHAPIAPTEECVRLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSF----RVDGVLCEGERAPWEDEVGCKFFSSPIGGV 841
T L+V + TS+ T++ ++ F TG P L P+ +R T+RTE + +W FEQ Q F +VS NIRMT ++L+ GGLW+HAPIAPT+EC++L++ELG V YIVLPT A+EHKV+V PFS +FPRAQV+ P QWSWP+NLP F R + E APW E+ K SSP G+
Sbjct: 50 TNLVVASSTSSVTNSNASGRFYFNITGFPFPLGPFLNRRTIRTEAVKDCIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWIHAPIAPTDECIQLIKELGAPVEYIVLPTFAYEHKVFVGPFSRKFPRAQVWVAPRQWSWPLNLPLEFFGIFRAKTLEDEDLSAPWAGEIEQKILSSPEVGI 231
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Match: Uncharacterized (protein n=5 Tax=Fagaceae TaxID=3503 RepID=A0A7N2QZ34_QUELO) HSP 1 Score: 183 bits (464), Expect = 3.950e-51 Identity = 93/179 (51.96%), Postives = 116/179 (64.80%), Query Frame = 2
Query: 329 LMVYTQTSARTDARPDRQYPFFTGLP--LKPYFDRPTVRTEEIPGVMWAFEQPQE--FFNVSVNIRMTAVRLEGGGLWVHAPIAPTEECVRLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSF----RVDGVLCEGERAPWEDEVGCKFFSSPIGGV 841
L T T+ R R Y FTG P L P+ +R T+RTE + G +W FEQ Q F +VS NIRMT ++L+ GGLWVHAPIAPT+EC++LV+ELG V YIVLPT A+EHK++V PFS +FPRAQV+ P QWSWP+NLP F R + E PW DE+ K SSP G+
Sbjct: 61 LATNTATTTTKTNRGGRFYFNFTGFPFPLGPFLNRSTLRTEAVKGCIWLFEQEQALGFSSVSTNIRMTIIKLKSGGLWVHAPIAPTKECIQLVKELGAPVEYIVLPTFAYEHKIFVGPFSRKFPRAQVWVAPRQWSWPLNLPLEFFGIFRAKTLKDEDSSTPWADEIEHKILSSPEVGI 239
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Match: uncharacterized (protein LOC114754681 isoform X2 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3C6F5) HSP 1 Score: 179 bits (455), Expect = 1.050e-50 Identity = 88/176 (50.00%), Postives = 116/176 (65.91%), Query Frame = 2
Query: 341 TQTSARTDARPDRQYPF-FTGLP--LKPYFDRPTVRTEEIPGVMWAFEQPQE--FFNVSVNIRMTAVRLEGGGLWVHAPIAPTEECVRLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSF----RVDGVLCEGERAPWEDEVGCKFFSSPIGGV 841
T + + P ++ F FTG P L P+ +R T+RTE + G +W FEQ Q F +VS NIRMT ++L+ GGLWVHAPIAPT+EC++L++ELG V YIVLPT A+EHK++V PFS +FPRAQV+ P QWSWP+NLP F R + + PW DE+ K SSP G+
Sbjct: 60 TAVTTQNSGNPSGRFYFNFTGFPFPLGPFLNRRTIRTEAVKGCIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTDECIKLLKELGAPVEYIVLPTFAYEHKIFVGPFSRKFPRAQVWVAPRQWSWPLNLPLEFFGIFRSKTLKDDDSSTPWADEIEHKILSSPEVGI 235
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Match: Uncharacterized (protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0SW89_KALFE) HSP 1 Score: 181 bits (460), Expect = 1.270e-50 Identity = 93/180 (51.67%), Postives = 118/180 (65.56%), Query Frame = 2
Query: 329 LMVYTQTSARTDARP-DRQYPFFTGLP--LKPYFDRPTVRTEEIPGVMWAFEQPQE--FFNVSVNIRMTAVRLEGGGLWVHAPIAPTEECVRLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSF----RVDGVLCEGERAPWEDEVGCKFFSSPIGGV 841
L+ +SA T A P DR Y TG P L P+ +R T+RTE + G +W FEQ Q F +VS NIRMT ++L+ GGLWVHAPIAPT+EC++LV+ELG V YIVLPT A+EHK++V PFS +FPRAQ++ P QWSWP+NLP F R + PW DE+ K SSP G+
Sbjct: 51 LVAAASSSATTSAGPRDRFYFNVTGFPFPLGPFLNRTTIRTEAVKGTIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLVKELGAPVEYIVLPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLEFFGIFRAKTLKDGDLSTPWADEIEQKVLSSPEVGI 230 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8154.16308.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8154.16308.1 >prot_E_fasciculatus_S2_contig8154.16308.1 ID=prot_E_fasciculatus_S2_contig8154.16308.1|Name=mRNA_E_fasciculatus_S2_contig8154.16308.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=267bp MRRLSIASLFLFLSVCAAFFSTPAQINVGDSHGSRGVQHRPRSSQQNARHback to top mRNA from alignment at E_fasciculatus_S2_contig8154:6..3867- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8154.16308.1 ID=mRNA_E_fasciculatus_S2_contig8154.16308.1|Name=mRNA_E_fasciculatus_S2_contig8154.16308.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3862bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8154:6..3867- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8154:6..3867- >mRNA_E_fasciculatus_S2_contig8154.16308.1 ID=mRNA_E_fasciculatus_S2_contig8154.16308.1|Name=mRNA_E_fasciculatus_S2_contig8154.16308.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=801bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8154:6..3867- (Ectocarpus fasciculatus EfasUO2)back to top |