mRNA_E_fasciculatus_S2_contig8132.16286.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Polynucleotide (adenylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT4_ECTSI) HSP 1 Score: 554 bits (1427), Expect = 2.640e-195 Identity = 278/280 (99.29%), Postives = 280/280 (100.00%), Query Frame = 1
Query: 1 MAGRGLGAAGGPAGGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
MAGRGLGAAGGP+GGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIR+MFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV
Sbjct: 1 MAGRGLGAAGGPSGGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 280
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Polynucleotide (adenylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW8_9PHAE) HSP 1 Score: 536 bits (1382), Expect = 3.880e-186 Identity = 276/305 (90.49%), Postives = 279/305 (91.48%), Query Frame = 1
Query: 1 MAGRGLGAAGGPAGGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
MAGRGLGAAGGP+ GGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIR+MFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV PNYDSFLPVVRCVR+WAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV
Sbjct: 1 MAGRGLGAAGGPSSGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVLDGVDRPTEKCVNGPRVTNMIHRLVPNYDSFLPVVRCVRKWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 305
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Polynucleotide (adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG61_9STRA) HSP 1 Score: 282 bits (721), Expect = 3.330e-87 Identity = 149/284 (52.46%), Postives = 184/284 (64.79%), Query Frame = 1
Query: 70 VPRPM--YEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
P+P+ + IN P+ D DAKL ++ NVPVM+ ++ RE+VL ++ +F +WV ++ L G+ EE A+AAGG I TSGSYRL IHEP SDIDA C+AP CT FFT+L++ L HP V N NAI+TAAVPI+ FD ++IDLGL CLPV +V +IDDD V PNY SFLPVVR VR WAK RG+Y NKMGYLGGVNFNI+VAFACQ+YP A PS LL FFK+M W WPN I L +P+DA LGL+V
Sbjct: 5 TPKPVQCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQV 288
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAC0_9STRA) HSP 1 Score: 258 bits (659), Expect = 2.240e-78 Identity = 136/277 (49.10%), Postives = 179/277 (64.62%), Query Frame = 1
Query: 85 YEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
Y+ I T+ P DLEL AKL+A+M ++ P+ V+++RR +LG++RS+F WV D L+ G+ EE A AGG I SGSYRL ++EP +DID ICVAP+F T E FFT+LKE L+ H V N+ AI+ A VPI+ ++EI+IDL +A L ++P +++ DDQ+ PN SF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F Q+YP A PSTLL RFF ++ W WP AIQL + DA LGLEV
Sbjct: 7 YKAIRTTPPEPADLELSAKLQAYMDEHYPMELDVNIQRRTIILGELRSIFRAWVKDVCLKRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFTSLKEILLKHAKVTNLVAIEGALVPILTFDYEEINIDLQIAILDRNSIPDNINVLDDQILSGVDPATEKSLNGPRVTELVIKLTPNRASFIAVLRIVRRWAKRRGLYSNKMGYLGGVNYCILVCFVNQLYPTAAPSTLLLRFFMILTNWKWPLAIQLCKTIDANLGLEV 283
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFD2_9STRA) HSP 1 Score: 257 bits (657), Expect = 5.760e-78 Identity = 134/286 (46.85%), Postives = 182/286 (63.64%), Query Frame = 1
Query: 58 AAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
A G V Y+PI + P D+EL AKLEAFM + P T +++RR +L ++R +F WV D L+ G+ EE A AGG + SGSYRL ++EP +DID CVAP+F T E FF++LKE L+ HP V N+ AI+ A VPI+ +++I+IDL +A L + ++P ++I DD + PN SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F Q+YP A PSTLL RFF +++ W WP+AIQL + YDA+LGLE+
Sbjct: 10 APGTVLEQAYKPIRMTPPEPVDVELSAKLEAFMASHFPTETEKNIQRRTMILAELRRIFRAWVKDVCLQRGVLEEIANEAGGTVLVSGSYRLGVNEPGADIDTNCVAPKFVTREDFFSSLKEILLKHPKVTNLVAIEGATVPILTFDYEDINIDLQIAILNLSSIPDNINILDDNILRGVDSATEKSLNGPRVTELMINLTPNRSSFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEI 295
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNJ7_9STRA) HSP 1 Score: 256 bits (655), Expect = 9.760e-78 Identity = 137/286 (47.90%), Postives = 182/286 (63.64%), Query Frame = 1
Query: 58 AAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
A G V Y+PI T+ P DLE+ AKL+A+M N P T +++RR +LG +R +F WV D ++ G+ EE A AGG I SGSYRL ++EP +DID ICVAP+F T E FF++LK+ L+ H V N+ AI+ A VPI+ ++EI+IDL +A L ++P L I DD + PN +SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F Q+YP A PSTLL RFF +++ W WP+AIQL + YDA+LGLEV
Sbjct: 8 APGTVLEQAYKPIRTTPPEPIDLEMSAKLQAYMDKNFPTETEKNIQRRTIILGDLRRIFRAWVKDVCIQRGVLEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFSSLKDILLKHSKVTNLVAIEGAVVPILTFDYEEINIDLQIAILDRSSIPDDLRILDDNILDGVDTATEKSLNGPRVTELMIKLTPNRESFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEV 293
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZM27_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.860e-77 Identity = 131/280 (46.79%), Postives = 172/280 (61.43%), Query Frame = 1
Query: 79 PMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV--------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
P+ +P T+AP +LDA LEAFM+ +VPV LR RE+VLG+++ +F WV G+S++ A AGG++YTSGSYRL +HEP +DID++CVAP CT FF TLK L+ HP V N+ +++TA VPI+ F E++IDL A LP+ +P LD+D+D V NY SFL +R R WAK RG+YSNKMGYLGGVNFNI+VA CQ++P A PS LL +FF + A WNWP+ L +P D G EV
Sbjct: 6 PLLKPFETAAPPANYKKLDASLEAFMKVHVPVEKEAGLRTRERVLGELKRIFQDWVRQVCRAKGLSDDLANEAGGRLYTSGSYRLGVHEPGADIDSVCVAPNHCTRTEFFDTLKTALLDHPDVTNLRSVETAVVPIMTFDFCEVNIDLLFAHLPLNAIPAHLDVDEDAVLQGVDEATEKSLNGPRVTNLIYKLVEHNYGSFLVALRVARVWAKKRGIYSNKMGYLGGVNFNILVALVCQLFPAATPSYLLTKFFHIFADWNWPSPAILCRPVDHGYGFEV 285
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Polynucleotide (adenylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQA8_GLOUD) HSP 1 Score: 256 bits (654), Expect = 6.700e-77 Identity = 137/283 (48.41%), Postives = 178/283 (62.90%), Query Frame = 1
Query: 67 HVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
HV Y+ I T+ P DLE KL+ +M + P + ++ RR +L ++RS+F WV L+ G+ EE A AGG+I SGSYRL ++EP +DID ICVAP+ T E FFT+LKE + HP V+N+ +I+ A VPII ++EI+IDL +A LP T+P L+I DD V PN DSF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F Q+YP A PSTLL RFF ++A W WP AIQL + +DA+LGLEV
Sbjct: 11 HVLEQAYKAIRTTPPEPKDLEQSVKLQKYMDEFFPTESDENITRRSMILAELRSIFRDWVKQVCLQKGVPEEIAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFTSLKEIFLKHPKVSNLVSIEGAIVPIITFDYEEINIDLQIAILPRNTIPDNLNILDDSVLVGVDTATEKSLNGPRVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLANWKWPLAIQLCKTHDAKLGLEV 293
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=7 Tax=Phytophthora TaxID=4783 RepID=G4YPR7_PHYSP) HSP 1 Score: 255 bits (652), Expect = 1.110e-76 Identity = 135/283 (47.70%), Postives = 180/283 (63.60%), Query Frame = 1
Query: 67 HVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
HV Y+ I T+ P DLE AKL++FM ++ P + ++ RR +L ++RS+F QWV ++ G+ EE A AGG+I SGSYRL ++EP +DID ICVAP+ T E FF++LKE + HP V+N+ AI+ A VPI+ ++EI+IDL +A LP ++P L+I DD V PN +SF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F Q+YP A PSTLL RFF ++ W WP AIQL + +DA LGLEV
Sbjct: 11 HVLEQAYKAIRTTPPEPKDLEQSAKLQSFMDEHFPTESDANITRRSLILAELRSIFRQWVKQVCMDKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLQHPKVSNLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEV 293
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Match: Poly(A) (polymerase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSM9_9STRA) HSP 1 Score: 253 bits (645), Expect = 4.220e-76 Identity = 133/286 (46.50%), Postives = 181/286 (63.29%), Query Frame = 1
Query: 58 AAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRSMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEV 840
A G V Y+PI + P DLEL AKLEAFM + P T +++RR +L ++R +F WV D L+ G+ EE A AGG + SGSYRL ++EP +DID CVAP+F T E FF++LK+ L+ +P V N+ AI+ A VPI+ +++I+IDL +A L ++P ++I DD + PN SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F Q+YP A PSTLL RFF +++ W WP+AIQL + YDA+LGLE+
Sbjct: 8 APGTVLEQAYKPIRITPPDPADLELSAKLEAFMASHFPTETEKNIQRRTMILAELRRIFRAWVKDVCLQRGVLEEIANEAGGIVLVSGSYRLGVNEPGADIDTNCVAPKFVTREDFFSSLKDILLKNPKVTNLVAIEGATVPILTFDYEDINIDLQIAILDRSSIPDNINILDDNILSGVDSATEKSLNGPRVTELMIRLTPNRSSFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEI 293 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8132.16286.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8132.16286.1 >prot_E_fasciculatus_S2_contig8132.16286.1 ID=prot_E_fasciculatus_S2_contig8132.16286.1|Name=mRNA_E_fasciculatus_S2_contig8132.16286.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=280bp MAGRGLGAAGGPAGGGGKRAAGHVPRPMYEPINTSAPSKTDLELDAKLEAback to top mRNA from alignment at E_fasciculatus_S2_contig8132:82..6354+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8132.16286.1 ID=mRNA_E_fasciculatus_S2_contig8132.16286.1|Name=mRNA_E_fasciculatus_S2_contig8132.16286.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6273bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8132:82..6354+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8132:82..6354+ >mRNA_E_fasciculatus_S2_contig8132.16286.1 ID=mRNA_E_fasciculatus_S2_contig8132.16286.1|Name=mRNA_E_fasciculatus_S2_contig8132.16286.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=840bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8132:82..6354+ (Ectocarpus fasciculatus EfasUO2)back to top |