mRNA_E_fasciculatus_S2_contig81.16254.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig81.16254.1
Unique NamemRNA_E_fasciculatus_S2_contig81.16254.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBC6_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 2.780e-160
Identity = 233/242 (96.28%), Postives = 234/242 (96.69%), Query Frame = 1 
Query:    1 KGNKPKGPPGQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA 726
            KG+KPKGPPGQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGG DEVTL LA     MQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELK LSDRGHNLQA
Sbjct:    5 KGSKPKGPPGQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGADEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKALSDRGHNLQA 246
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLJ2_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 1.420e-155
Identity = 221/229 (96.51%), Postives = 222/229 (96.94%), Query Frame = 1 
Query:   40 MPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA 726
            MPELSDYVKSRDFTGAVTLLEFNRRSGED+TLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGG DEVTL LA     MQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA
Sbjct:    1 MPELSDYVKSRDFTGAVTLLEFNRRSGEDETLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGADEVTLFLACCYYYMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA 229
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL9_9STRA)

HSP 1 Score: 329 bits (843), Expect = 3.590e-107
Identity = 162/236 (68.64%), Postives = 201/236 (85.17%), Query Frame = 1 
Query:   25 PGQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLG-GTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSD-TNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA 726
            PG+ K+PELS+YV  RD+TGA+ LLEFNRRSG+DD LED L+W+GYCAFH+G YQRA+EAY+E+ ++G G  +V L +A     +Q +D+AEEAA +GP+  L+ RLL H++HK  DE KLM  HQ+LS+ ++EDQLSLAAIHYLRSHFQEATDIYK+LLLENRD++ALNVYVAMCYYKLDYYDVS+EILAVYLQA P SAVA+NLKACN+FRLYNGKAAETEL+ L+++G  LQ+
Sbjct:   25 PGKPKVPELSEYVDKRDYTGALALLEFNRRSGDDDNLEDMLLWIGYCAFHVGRYQRALEAYEEVVAIGAGGGDVHLYVACCHYYLQSYDQAEEAASRGPKGPLRTRLLLHIAHKQNDERKLMQQHQELSEKSSEDQLSLAAIHYLRSHFQEATDIYKKLLLENRDNIALNVYVAMCYYKLDYYDVSMEILAVYLQAQPSSAVAINLKACNLFRLYNGKAAETELRVLAEQGRGLQS 260
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Match: Intraflagellar (transport protein 56 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G680_9STRA)

HSP 1 Score: 322 bits (825), Expect = 1.940e-104
Identity = 159/227 (70.04%), Postives = 192/227 (84.58%), Query Frame = 1 
Query:   43 PELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGTD-EVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNL 720
            P+  DYVKSRD+TGA+ LLEFN+ +  DD   ++ MWLGYCA HLG+Y++A+EA+Q+L+ LG T  EV L LA     +QM+D+AEE A +GP C L+NRLLFH++HK  DENKLM YHQKLSDT EDQLSLAAIHYLR+H+QEATDIYK+LLL++RDDLALNVYVAMCYYKLDYYDVSLEILAVYLQ+ PDS +A+NLKACN FRLYNGKAAE ELK L+++GH+L
Sbjct:   31 PQREDYVKSRDYTGAIALLEFNQHA--DDFDAESCMWLGYCAAHLGDYKKALEAFQDLQRLGDTGKEVHLYLAICMYFLQMYDEAEEEALQGPTCGLQNRLLFHIAHKQNDENKLMVYHQKLSDTKEDQLSLAAIHYLRNHYQEATDIYKQLLLQHRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQSHPDSVIAINLKACNHFRLYNGKAAEAELKALNEQGHSL 255
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T0C7_9STRA)

HSP 1 Score: 285 bits (730), Expect = 4.550e-94
Identity = 146/229 (63.76%), Postives = 183/229 (79.91%), Query Frame = 1 
Query:   43 PELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGG-TDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA 726
            P L DY+  RDFTGA+TLLEF  +  + ++ +D L+W+ YCAFHLG+++RA +AY+EL S    +DEV L L+      Q +++AE  A+KGP   LK RLLF++SH+L D+NKLM YHQ L D  EDQL+LA++ YLRS +QEA DIYKRLL+E+RDDLALNVYVA+CYYKLDYYDVSLEIL+VYLQA+PDSAVA+NLKACN FRLYNGKAAETELK LS++G  LQ+
Sbjct:   20 PSLEDYLIQRDFTGALTLLEFKLKCRDGES-KDLLLWIAYCAFHLGHFRRAQDAYKELLSAHEVSDEVYLFLSACMFYQQNYEEAEATAEKGPNTPLKIRLLFNISHRLGDDNKLMKYHQLLRDKREDQLTLASVQYLRSQYQEAIDIYKRLLMESRDDLALNVYVAICYYKLDYYDVSLEILSVYLQAYPDSAVAVNLKACNHFRLYNGKAAETELKALSEKGVMLQS 247
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Match: TTC26 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VCC2_SYMMI)

HSP 1 Score: 293 bits (751), Expect = 1.810e-93
Identity = 154/235 (65.53%), Postives = 180/235 (76.60%), Query Frame = 1 
Query:   28 GQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGTD---EVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQ 723
            G +  P L D++++RD+TGA+ LLEF  +  +D  ++D LMW+GY AFHLGNY+RA +AY+EL  L   D   EV L L       QM+D+ E  A KGP  AL+NRLLF++ H+  DE+KLM YHQ L DT EDQLSLA +HYLRSH QEATDIYKR LLENR+DLALNVYVAMCYYKLDYYDVSLEILA YLQA PDSA A+NLKACN FRLYNGKAAE ELK L+DRG NLQ
Sbjct:   18 GAKGQPSLHDFIQTRDYTGALALLEFKLKC-QDGNMKDLLMWVGYAAFHLGNYKRAEDAYKEL--LDNHDVPLEVHLFLGCCYFYQQMYDEGEVEALKGPPNALQNRLLFNICHRKGDEDKLMAYHQNLRDTKEDQLSLAGVHYLRSHHQEATDIYKRQLLENREDLALNVYVAMCYYKLDYYDVSLEILAAYLQAQPDSATAINLKACNHFRLYNGKAAEAELKVLADRGVNLQ 249
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Match: Uncharacterized (protein n=27 Tax=Oomycota TaxID=4762 RepID=H3G8C9_PHYRM)

HSP 1 Score: 291 bits (744), Expect = 3.250e-92
Identity = 144/239 (60.25%), Postives = 182/239 (76.15%), Query Frame = 1 
Query:   34 QKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLED---------TLMWLGYCAFHLGNYQRAIEAYQELESLGGTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQ 723
            +K P   + V  RDFTGA  +LEFN +S +  ++           TL+WL Y +FHLGNYQRA++AY +L  +  T EV L  A     +QM+ +A + A+KGP   L+NRLLFH +HK+ DE+KL+ YHQ+L+D+ EDQLSLAAIHY R+HFQEATDIYKRLLLENRDD+ALNVYVAMCYYKLDYYDVSLEI+  YLQAFPDS VA+N+KACN F+LYNG AA+ E+KTL+DRG+N++
Sbjct:   30 KKGPTAEECVAKRDFTGASAILEFNLKSDDASSVSGPAKAEEKRKTLLWLAYASFHLGNYQRALDAYAQLRDVDDTPEVFLYRACCLFYLQMYKEAAKEAEKGPAGQLQNRLLFHCAHKMGDEDKLLVYHQQLTDSKEDQLSLAAIHYFRNHFQEATDIYKRLLLENRDDIALNVYVAMCYYKLDYYDVSLEIMQAYLQAFPDSVVAVNVKACNQFKLYNGAAAKDEIKTLTDRGYNIE 268
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Match: Ttc26 (protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Y778_9DINO)

HSP 1 Score: 290 bits (741), Expect = 1.350e-91
Identity = 149/228 (65.35%), Postives = 177/228 (77.63%), Query Frame = 1 
Query:   31 QQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESLGGTDE-VTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRG 711
            ++K PEL  +V + DF+GA+ LLEFN  +   D  + T +WLGYCAFHLG+Y+RAIEAY+E  + G  DE V L +A     +Q + +A E A KGP   L+NR+LFH +HKL DE KLM YH KL +  EDQLSLAA+HYLR H QEATDIYKRLLL+ RDDLALNVYVAMCYYKLDYYDVSLE+LAVYLQ+FPDSA+A+NLKACN FRLYNGKAAE ELK+L D G
Sbjct:   28 ERKKPELDKFVSTYDFSGALALLEFNISA--KDVTDKTWLWLGYCAFHLGDYERAIEAYREALNRGHGDENVHLFIACCMYYLQRYKEAMEEANKGPANMLQNRVLFHCAHKLGDETKLMMYHAKLGEATEDQLSLAAMHYLRGHQQEATDIYKRLLLDKRDDLALNVYVAMCYYKLDYYDVSLEVLAVYLQSFPDSAIAVNLKACNHFRLYNGKAAEAELKSLLDHG 253
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Match: intraflagellar (transport protein 56 isoform X2 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07A5ED)

HSP 1 Score: 281 bits (718), Expect = 4.460e-91
Identity = 139/225 (61.78%), Postives = 175/225 (77.78%), Query Frame = 1 
Query:   34 QKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELE-SLGGTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSD 705
            +K+P + DY+  RD+ GA TLLEF R  GE +   D  +W+GYCAFHLG+Y+RA+E Y+ L  S    +EV +LLA     + ++ +AEEAA K P+C L+NRLLFH++HK  DE KLM++HQ L D  EDQLSLA+IHY+RSH+QEA DIYKR+LL+NR+ LALNVYVA+CYYKLDYYDVS E+LAVYLQ+ P+S +A+NLKACN FRLYNGKAAE ELK L D
Sbjct:   26 KKIPRVEDYLNQRDYLGAQTLLEFQRDVGEREEHAD--LWIGYCAFHLGDYKRAMEEYRSLTVSPDSPEEVWVLLACTLFFLGLYREAEEAASKAPKCPLQNRLLFHLAHKFNDEKKLMSFHQNLEDVTEDQLSLASIHYMRSHYQEAIDIYKRILLQNREFLALNVYVALCYYKLDYYDVSQEVLAVYLQSIPESTIALNLKACNHFRLYNGKAAEAELKNLID 248
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Match: intraflagellar (transport protein 56 isoform X4 n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7EEE3D)

HSP 1 Score: 280 bits (716), Expect = 5.070e-91
Identity = 139/225 (61.78%), Postives = 177/225 (78.67%), Query Frame = 1 
Query:   34 QKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQEL-ESLGGTDEVTLLLAXXXXXMQMFDKAEEAAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHYLRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYLQAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSD 705
            +K+P+L +Y+ SRD++GA+TLLEF R  GE +  ED  +W+GYCAFHLG+Y+RA+E Y+ L +S     +V + LA     + M+ +AEEAA K P+  L+NRLLFH++HK  DE +LM YHQ L D  EDQLSLA+IHY+RSH+QEA DIYKR+LL+NR+ +ALNVYVA+CYYKLDYYDVS E+LAVYLQ +PDS +A+NLKACN FRLYNGKAAE ELK L D
Sbjct:   45 KKIPKLEEYLTSRDYSGALTLLEFKRHVGESE--EDIDLWMGYCAFHLGDYRRAMEEYEALTKSEDCHPDVWVNLACTFFFLGMYKEAEEAATKAPKSRLQNRLLFHLAHKFSDEKRLMNYHQNLQDITEDQLSLASIHYMRSHYQEAIDIYKRILLDNREFMALNVYVALCYYKLDYYDVSQEVLAVYLQHYPDSTIALNLKACNHFRLYNGKAAEAELKNLMD 267
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig81.16254.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.780e-16096.28protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.420e-15596.51protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.590e-10768.64protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Intraflagellar1.940e-10470.04transport protein 56 n=1 Tax=Hondaea fermentalgian... [more]
Hypothetical4.550e-9463.76protein (Fragment) n=1 Tax=Chromulina nebulosa Tax... [more]
TTC261.810e-9365.53protein n=1 Tax=Symbiodinium microadriaticum TaxID... [more]
Uncharacterized3.250e-9260.25protein n=27 Tax=Oomycota TaxID=4762 RepID=H3G8C9_... [more]
Ttc261.350e-9165.35protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 ... [more]
intraflagellar4.460e-9161.78transport protein 56 isoform X2 n=1 Tax=Hypomesus ... [more]
intraflagellar5.070e-9161.78transport protein 56 isoform X4 n=1 Tax=Carcharodo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig81contigE_fasciculatus_S2_contig81:6170..9213 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score466.1
Seed ortholog evalue1e-128
Seed eggNOG ortholog2880.D8LBC6
Preferred nameTTC26
Model size727
KEGG koko:K19685
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000902,GO:0000904,GO:0001655,GO:0001822,GO:0002009,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007399,GO:0008150,GO:0008594,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030705,GO:0030990,GO:0030992,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032991,GO:0035239,GO:0035295,GO:0035720,GO:0035735,GO:0035845,GO:0036064,GO:0039022,GO:0039023,GO:0042073,GO:0042461,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0046530,GO:0046907,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048729,GO:0048731,GO:0048793,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060271,GO:0060429,GO:0060562,GO:0060993,GO:0065007,GO:0070925,GO:0071840,GO:0072001,GO:0072073,GO:0072114,GO:0072176,GO:0072178,GO:0097542,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038
Exons6
EggNOG free text desc.intraciliary transport
EggNOG OGsKOG3785@1,KOG3785@2759
Ec32 ortholog descriptionTetratricopeptide TPR2
Ec32 orthologEc-27_004420.1
Cds size726
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig81.16254.1prot_E_fasciculatus_S2_contig81.16254.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig81 6171..9213 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842470.2333262-CDS-E_fasciculatus_S2_contig81:6170..62571696842470.2333262-CDS-E_fasciculatus_S2_contig81:6170..6257Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig81 6171..6257 -
1696842470.2464955-CDS-E_fasciculatus_S2_contig81:6678..68461696842470.2464955-CDS-E_fasciculatus_S2_contig81:6678..6846Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig81 6679..6846 -
1696842470.2556643-CDS-E_fasciculatus_S2_contig81:7329..75091696842470.2556643-CDS-E_fasciculatus_S2_contig81:7329..7509Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig81 7330..7509 -
1696842470.2646828-CDS-E_fasciculatus_S2_contig81:8042..81231696842470.2646828-CDS-E_fasciculatus_S2_contig81:8042..8123Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig81 8043..8123 -
1696842470.2734072-CDS-E_fasciculatus_S2_contig81:8553..86971696842470.2734072-CDS-E_fasciculatus_S2_contig81:8553..8697Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig81 8554..8697 -
1696842470.2821205-CDS-E_fasciculatus_S2_contig81:9147..92131696842470.2821205-CDS-E_fasciculatus_S2_contig81:9147..9213Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig81 9148..9213 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig81.16254.1

>prot_E_fasciculatus_S2_contig81.16254.1 ID=prot_E_fasciculatus_S2_contig81.16254.1|Name=mRNA_E_fasciculatus_S2_contig81.16254.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=242bp
KGNKPKGPPGQQKMPELSDYVKSRDFTGAVTLLEFNRRSGEDDTLEDTLM
WLGYCAFHLGNYQRAIEAYQELESLGGTDEVTLLLACCYYYMQMFDKAEE
AAKKGPECALKNRLLFHVSHKLLDENKLMTYHQKLSDTNEDQLSLAAIHY
LRSHFQEATDIYKRLLLENRDDLALNVYVAMCYYKLDYYDVSLEILAVYL
QAFPDSAVAMNLKACNVFRLYNGKAAETELKTLSDRGHNLQA
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mRNA from alignment at E_fasciculatus_S2_contig81:6170..9213-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig81.16254.1 ID=mRNA_E_fasciculatus_S2_contig81.16254.1|Name=mRNA_E_fasciculatus_S2_contig81.16254.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3044bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig81:6170..9213- (Ectocarpus fasciculatus EfasUO2)
AAGGGGAACAAACCGAAGGGGCCTCCGGGGCAGCAGAAGATGCCGGAGCT
CAGCGATTATGTCAAGGTGGGTAGGGACAAAGCCTCGGGAACTCGTCATC
GCGTGCGTGTGATCACCGAGTATAGCACTAAGCATCGCAAGAGCCATTAC
AGGTTTATGCTTACAGTAGTACTGCGGCGGGCGTGACGACGACTACTACT
GTGGAGCCGTCCCTCGTAGTGGGATGTTTTGGTCATTTGTACGCATGCAC
TAGACATCAGTCATAGGGAAAGCCCGCAAACCAGCCCAAGACATGCTTAG
TCTTTCAACATCGTCGTCAGCAAAGTTCCTGTGTGATGACTCCAGGTTGT
ACGATTTTTCATGTCTTGGGCGTGTACGCTATTATTATGGCCGCTACAAC
AGCACCCGCAAGACCCCCACGAACTGCTACATGTAGTGTGATGGTGGCTT
GCCAACTTGTATTGTTCGACGACATGCTCACGTAATTTTCTCGTTCTTGG
CTCTTCGTTTCATCAGTCGAGGGATTTCACCGGCGCAGTAACGCTGCTAG
AGTTCAACCGGCGGTCGGGAGAAGACGACACCCTCGAAGACACCCTCATG
TGGCTGGGGTACTGCGCCTTTCACCTCGGGAACTACCAACGAGCCATCGA
AGCCTACCAGGTACATCAAACGTGTCCCGTTTAAAGGTGGGCAATAGCGC
GTCGGGAGGGTTCACAGGTATCTTGGTGATGTTTGCGTTTCACGAATGAG
TCTGATGTGGACAGCGGGAGGTTGTGTCGTAGTGATGGGACACAGTCAGT
GCGGACGAACAAGTTTCAGAGCCGACCAACACACAGTGTGTGGTGTTCAA
CAGAGAGGACGACTACGGCAACAACAACGTTGAAAGACAGCAAACGACGA
CGATGAACTCCGACAAGAAACGTTGATCGTACTCGAAGTAGCAGCAGCAC
GCCAAAGGCCTCCTTCGCAGCACGAAGTCCAACCGATCCCCTGCAGCGGC
ATCGTGTGCTTCACCGCACTTGGCCCCCTGTGAGGATGGCCATCGTTCCG
GCCCTCCGCTAACGGGTAAAACACAAATCGCCCATCGCAGGAGCTGGAAT
CGCTTGGCGGGACGGATGAGGTCACCTTGCTTCTGGCATGTTGCTACTAC
TATATGCAGATGTTCGACAAGGTGAGCTATGTCGGCAAGTATTCCGCGCA
AGCATGGATTATCGGCGATCGGATCGGGGCAACGACAAGAGGTTGGGCAT
AGCGACAGCAGTAGTCCAATTCCTCGTTAGTGGCTGTTCACTCGTCGTCT
AGACTACAGAACGGAGGATACCACCGGAGAAAGAGCCTCAAGAAGCTACA
CCAGAAACTCTGATACTTGCCATGCACCAGCTTTGTCGAGTTATTGCCCA
ACTCACGTGCACTCAAAACAGGTTATAGTCGTGTTTCTTGCATTCTACAA
CGCCCCCCCCGTCCTGGTTTGGCACAGCAAACGCAAGGATAAGGATAAGG
ATAAGGATGATGACTAGTTCACCCTTGCTTGTGAAACGTAGCCTGGGCAG
GCGAAATCCCGGCGTATCGCTCCGTCCCGGCATTGTGCGCATGCGAGGTC
TATCGCCTACCGAGTACGGCATGCGTTTACATGACCCAACCTCCCATCCC
CCCGACTTGTGGGGCTTTCGGTCCCACAACCTTTTGTATATCTACTGCAC
CCAGGCGGAGGAGGCTGCGAAAAAGGGTCCCGAGTGCGCCCTGAAGAATC
GCTTGTTGTTCCACGTGTCGCACAAGCTGCTCGACGAGAATAAGCTCATG
ACGTACCACCAGAAGCTCAGTGACACCAACGAAGACCAGCTGTCTCTCGC
GGCGATCCACTACCTGAGGAGCCACTTCCAGGAGGTGGGGGGAACAACGT
GCTAGACTGAAAGCGAGGATTTTTCGGAGGCCAGTTGCTTCGTCGAGTGC
TGCACAGCTGCTGCTCAACTCTTACTCTTTTCGCCCAGAATATGACCGTT
GGAGGTTTGTTCGCATCCAACAGACTTTGCCGTTGTAATGGGGCCCGTTA
CATGAAAACTACCTACGTCACAGTGAACAAACCGATTCAAACATACCTCG
CGATCGCGTCGTAAGGATTCCTCATTATGAGTTGATTTTCGTCCTTATCA
AACACAAGGGATCTTCTTGCACGAAGACAAACAGAGAATAGATTTTAGCA
CGGTTTGATGTGCGACCGTCGCAAATAGTATTATAGTTCTTCGACGACTG
TAAAATCAGCAAAGACGAAAACACGTGAGGTGCTCGATTGAACCGACCAA
CGAACGCATGCACTGAGGATGACGCAGAATCCATGCGGTCAAACACATAA
AAAAATGAAAAATCCAGGCAACGGACATCTACAAACGCCTTTTGTTGGAG
AATCGGGACGACCTCGCGTTGAACGTGTACGTGGCCATGTGCTACTACAA
GCTCGACTACTACGACGTGTCTCTGGAGATCCTCGCCGTGTACCTGCAGG
CTTTCCCGGACAGTGCTGTCGCCATGAACCTCAAGGTGAGACAATACAAA
GAGAGGGTGTATGTACATGGGAGGGGCGGGGGGGTACTCATTGTCGTGCA
TACCGTAGTCGTTAGGCCATTGGCCTCGCACCCCTACAAAGCCGTGACGA
GGCACGCCGGGTTCTTTCTCACCGGACCAGGCTATCACATCACCAAGCGC
GAAGCGCCGTGAGATATTCGGCGAGTCGCATGTGCATGGGATGGGGATGG
CCTATGTTACGTGACGTGAGCATGCTACTACTACGCAAAACGAAAGGATC
CAACGTACGGTTCCCGGAGAATGAGTTTTTCCGTCCATTCGTGCTCATCA
TTCGCCAGATCGTCAGGTAAATCGTGGAATGGCTCTTCAGTACTCTCGCC
TTCGTTCTCTCAATTTAACACTCTTTCTGCTCCTGCCCGGCGGTGCGCTT
CTTCAGGCCTGCAACGTTTTCCGCCTGTACAACGGCAAGGCGGCGGAGAC
CGAGCTCAAGACTCTCTCCGACCGAGGACACAACCTACAGGCAT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig81:6170..9213-

>mRNA_E_fasciculatus_S2_contig81.16254.1 ID=mRNA_E_fasciculatus_S2_contig81.16254.1|Name=mRNA_E_fasciculatus_S2_contig81.16254.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=726bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig81:6170..9213- (Ectocarpus fasciculatus EfasUO2)
AAGGGGAACAAACCGAAGGGGCCTCCGGGGCAGCAGAAGATGCCGGAGCT
CAGCGATTATGTCAAGTCGAGGGATTTCACCGGCGCAGTAACGCTGCTAG
AGTTCAACCGGCGGTCGGGAGAAGACGACACCCTCGAAGACACCCTCATG
TGGCTGGGGTACTGCGCCTTTCACCTCGGGAACTACCAACGAGCCATCGA
AGCCTACCAGGAGCTGGAATCGCTTGGCGGGACGGATGAGGTCACCTTGC
TTCTGGCATGTTGCTACTACTATATGCAGATGTTCGACAAGGCGGAGGAG
GCTGCGAAAAAGGGTCCCGAGTGCGCCCTGAAGAATCGCTTGTTGTTCCA
CGTGTCGCACAAGCTGCTCGACGAGAATAAGCTCATGACGTACCACCAGA
AGCTCAGTGACACCAACGAAGACCAGCTGTCTCTCGCGGCGATCCACTAC
CTGAGGAGCCACTTCCAGGAGGCAACGGACATCTACAAACGCCTTTTGTT
GGAGAATCGGGACGACCTCGCGTTGAACGTGTACGTGGCCATGTGCTACT
ACAAGCTCGACTACTACGACGTGTCTCTGGAGATCCTCGCCGTGTACCTG
CAGGCTTTCCCGGACAGTGCTGTCGCCATGAACCTCAAGGCCTGCAACGT
TTTCCGCCTGTACAACGGCAAGGCGGCGGAGACCGAGCTCAAGACTCTCT
CCGACCGAGGACACAACCTACAGGCA
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