mRNA_E_fasciculatus_S2_contig8091.16248.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8091.16248.1
Unique NamemRNA_E_fasciculatus_S2_contig8091.16248.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Match: Protein (O-GlcNAc transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZU9_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.660e-43
Identity = 84/87 (96.55%), Postives = 87/87 (100.00%), Query Frame = 1 
Query:  799 VHSLVFVCDWSNRDDDFAALKKMLATQMATENMLPSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 1059
            VHSLVFVCDWSNRD+DFAALKKMLATQMATEN+LPSVQPFHAMAYPLSL+EMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR
Sbjct:  531 VHSLVFVCDWSNRDNDFAALKKMLATQMATENVLPSVQPFHAMAYPLSLAEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 617
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Match: Protein (O-GlcNAc transferase (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YVI5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.410e-18
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 1 
Query:  802 HSLVFVCDWSNRDDDFAALKKMLATQMATENMLPSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 1059
            H+++FVCDW  RD D A L   L  Q+A + +LPSVQPFHA+ YPLSL     I+ +YAER K+NV+L+E+PA R+  K    R+R
Sbjct:  475 HAMMFVCDWRRRDADLAQLLAFLDAQLALDRVLPSVQPFHALVYPLSLQRFLDIARRYAERAKLNVSLVELPALRYKSKKSHERLR 560
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Match: Protein (O-GlcNAc transferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A3R7HUL3_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 4.000e-18
Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 1 
Query:  802 HSLVFVCDWSNRDDDFAALKKMLATQMATENMLPSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 1059
            HS+VF+CDW +R  D   L++ L  Q++ + +LPSVQPFHA+ YPLS+   Q IS +YAER K+NV+L+++P  RF  K    R+R
Sbjct:  422 HSMVFICDWQSRKQDTEVLQRFLDEQLSMDGVLPSVQPFHALVYPLSMQRFQDISRRYAERAKLNVSLVDLPPMRFKSKRASERLR 507
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Match: Probable (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=20 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DU52_PHYNI)

HSP 1 Score: 96.3 bits (238), Expect = 5.480e-18
Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 
Query:  802 HSLVFVCDWSNRDDDFAALKKMLATQMATENMLPSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 1059
            HS+VF+CDW +R  D   L++ +  Q++ +++LPSVQPFHA+ YPLS+   Q IS +YAER K+NV+L+++P  RF  K    R+R
Sbjct:  480 HSMVFICDWQSRKQDTETLQRFVDEQLSVDDVLPSVQPFHALVYPLSMQRFQDISRRYAERAKLNVSLVDLPPMRFKSKRASERLR 565
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH6_PYTOL)

HSP 1 Score: 95.5 bits (236), Expect = 9.750e-18
Identity = 42/86 (48.84%), Postives = 61/86 (70.93%), Query Frame = 1 
Query:  802 HSLVFVCDWSNRDDDFAALKKMLATQMATENMLPSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 1059
            HS++F+CDW +R+ D   L + L  Q+A +N+LPSVQPFHA+ YPLS+     IS +YAER K+NV+L+E P+ R+  K  + R+R
Sbjct:  489 HSMLFICDWQSREGDLKKLVQFLDAQLAMDNVLPSVQPFHALVYPLSMQCFLDISRRYAERAKLNVSLVEAPSLRYKSKKSQERLR 574
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Match: Probable (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYK0_HYAAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.790e-17
Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 1 
Query:  802 HSLVFVCDWSNRDDDFAALKKMLATQMATENMLPSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 1059
            HS+VF+CDW +R  D   L++ +  Q++ E +LPSVQPFHA+ YPLS+   Q IS +YAER K+NV+L+++P   F  K    R+R
Sbjct:  485 HSMVFICDWQSRTQDTEMLQRFVDEQLSMEGVLPSVQPFHALVYPLSMQRFQDISRRYAERAKLNVSLVDLPPMHFRSKLDSERLR 570
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Match: Protein (O-GlcNAc transferase n=2 Tax=Phytophthora TaxID=4783 RepID=D0NXA5_PHYIT)

HSP 1 Score: 93.6 bits (231), Expect = 4.290e-17
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 1 
Query:  802 HSLVFVCDWSNRDDDFAALKKMLATQMATENMLPSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 1059
            HS+VF+CDW +R  D   L++ +  Q++  ++LPSVQPFHA+ YPLS+   Q IS +YAER KMNV L+E+   RF  K    R+R
Sbjct:  486 HSMVFICDWQSRKQDTETLQRFVDEQLSVADVLPSVQPFHALVYPLSMQRFQDISRRYAERAKMNVQLVELSPMRFKSKRASERLR 571
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Match: Probable (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUK5_BRELC)

HSP 1 Score: 92.4 bits (228), Expect = 1.030e-16
Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 1 
Query:  802 HSLVFVCDWSNRDDDFAALKKMLATQMATENMLPSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 1059
            HS+VF+CDW  R  D   L++ +  Q+   ++LP+VQPFHA+ YPLS+     IS +YAER K+NV+L+E+P  RF  K    RIR
Sbjct:  482 HSMVFICDWRTRQQDTETLQRFVDEQLQINDVLPAVQPFHALVYPLSMQRFLDISRRYAERAKLNVSLVELPPMRFQTKQASERIR 567
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUC4_PYTIN)

HSP 1 Score: 92.0 bits (227), Expect = 1.480e-16
Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 1 
Query:  802 HSLVFVCDWSNRDDDFAALKKMLATQMATENMLPSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 1059
            HS+VF+CDW +R++D       +  Q+A +N LPSVQPFHA+ YPLS+     +  +YAER K+NV+L+E+PA ++  K    R+R
Sbjct:  497 HSMVFICDWQSREEDLKRXMAFVDAQLAVDNTLPSVQPFHALVYPLSMQRFLDLCRRYAERAKLNVSLVEIPALKYKIKRSNERLR 582
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Match: Probable (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVX4_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 8.230e-16
Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 1 
Query:  802 HSLVFVCDWSNRDDDFAALKKMLATQMATENMLPSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEARIR 1059
            HS+VF+CDW +R  D   L++ +  Q++   +L SVQPFHA+ YPLS+   Q IS +YAER K+NV+L+++P  RF  K    R+R
Sbjct:  470 HSMVFICDWQSRSQDTEMLQQFVDEQLSMGGVLLSVQPFHALVYPLSMQRFQDISRRYAERAKLNVSLVDLPPMRFKSKLASERLR 555
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8091.16248.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein1.660e-4396.55O-GlcNAc transferase n=2 Tax=Ectocarpus TaxID=2879... [more]
Protein3.410e-1851.16O-GlcNAc transferase (Fragment) n=1 Tax=Pythium br... [more]
Protein4.000e-1848.84O-GlcNAc transferase n=4 Tax=Phytophthora TaxID=47... [more]
Probable5.480e-1847.67UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
Uncharacterized9.750e-1848.84protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Probable1.790e-1747.67UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
Protein4.290e-1748.84O-GlcNAc transferase n=2 Tax=Phytophthora TaxID=47... [more]
Probable1.030e-1647.67UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
Uncharacterized1.480e-1645.35protein n=1 Tax=Pythium insidiosum TaxID=114742 Re... [more]
Probable8.230e-1646.51UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8091contigE_fasciculatus_S2_contig8091:240..6955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score176.0
Seed ortholog evalue3.1e-41
Seed eggNOG ortholog2880.D7FX68
Model size1077
KEGG rclassRC00005,RC00059
KEGG koko:K09667
KEGG ReactionR09304,R09676
KEGG Pathwayko00514,ko04931,map00514,map04931
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons10
EggNOG free text desc.protein N-acetylglucosaminyltransferase activity
EggNOG OGsCOG3914@1,KOG4626@2759
EC2.4.1.255
Cds size1077
COG Functional cat.O
CAZyGT41
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8091.16248.1prot_E_fasciculatus_S2_contig8091.16248.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8091 240..6955 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842469.591752-CDS-E_fasciculatus_S2_contig8091:239..3561696842469.591752-CDS-E_fasciculatus_S2_contig8091:239..356Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8091 240..356 -
1696842469.6058729-CDS-E_fasciculatus_S2_contig8091:1160..12411696842469.6058729-CDS-E_fasciculatus_S2_contig8091:1160..1241Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8091 1161..1241 -
1696842469.6182663-CDS-E_fasciculatus_S2_contig8091:1590..17581696842469.6182663-CDS-E_fasciculatus_S2_contig8091:1590..1758Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8091 1591..1758 -
1696842469.6333272-CDS-E_fasciculatus_S2_contig8091:2494..25581696842469.6333272-CDS-E_fasciculatus_S2_contig8091:2494..2558Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8091 2495..2558 -
1696842469.6470232-CDS-E_fasciculatus_S2_contig8091:3280..34051696842469.6470232-CDS-E_fasciculatus_S2_contig8091:3280..3405Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8091 3281..3405 -
1696842469.6676748-CDS-E_fasciculatus_S2_contig8091:4158..42691696842469.6676748-CDS-E_fasciculatus_S2_contig8091:4158..4269Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8091 4159..4269 -
1696842469.681876-CDS-E_fasciculatus_S2_contig8091:4882..49721696842469.681876-CDS-E_fasciculatus_S2_contig8091:4882..4972Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8091 4883..4972 -
1696842469.6983747-CDS-E_fasciculatus_S2_contig8091:5428..55401696842469.6983747-CDS-E_fasciculatus_S2_contig8091:5428..5540Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8091 5429..5540 -
1696842469.7102978-CDS-E_fasciculatus_S2_contig8091:6062..61721696842469.7102978-CDS-E_fasciculatus_S2_contig8091:6062..6172Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8091 6063..6172 -
1696842469.7210782-CDS-E_fasciculatus_S2_contig8091:6856..69551696842469.7210782-CDS-E_fasciculatus_S2_contig8091:6856..6955Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8091 6857..6955 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8091.16248.1

>prot_E_fasciculatus_S2_contig8091.16248.1 ID=prot_E_fasciculatus_S2_contig8091.16248.1|Name=mRNA_E_fasciculatus_S2_contig8091.16248.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=359bp
QGNLTTAVAYYREAIRLCPEFADAHSNLGNVLKERGLVHDAMQCYQTAIK
LRPDFAIAYGNLASCYYDCGCQDLAIKTFRYAIQLEPNFPDAYNNLGNAL
RESGQLEEAINCYRTTLRLKPDHPHAYNNLGNAMKDKGLIKEAIHCYVTA
VQLMPKFAAVHSNLGSVLKEQGKLGHALAHYHEAIAIDPGFADAYSNMGN
AYKDMGRLPEAIKCYSAAINIKPTFADAFSNLASAYKEGNDVLQAIACYR
KALALRPDFPDAFANLVHSLVFVCDWSNRDDDFAALKKMLATQMATENML
PSVQPFHAMAYPLSLSEMQQISCKYAERVKMNVALLEMPAFRFHRKAKEA
RIRWVLSA*
back to top

mRNA from alignment at E_fasciculatus_S2_contig8091:240..6955-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8091.16248.1 ID=mRNA_E_fasciculatus_S2_contig8091.16248.1|Name=mRNA_E_fasciculatus_S2_contig8091.16248.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6716bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8091:240..6955- (Ectocarpus fasciculatus EfasUO2)
CAGGGTAACCTTACGACGGCGGTGGCCTACTACCGCGAGGCGATACGGCT
GTGCCCAGAGTTCGCCGACGCCCACAGCAATCTCGGGAACGTCCTCAAGG
TATCCATACTATGCTACGGTATCTACGAAACACTGCTATGGTTGTTGCCG
CTGCTTGTAGTAGTACTCCTTTCGATGTTTCACCCTTGTGGACGCGATAC
TGTTTGTCGTCCAGTCAGTATGTTGACCAAGAGAGCGGGTAATCAGCAAG
CAACAACACGAGAAAGAAAAATGAGTGTGGTGATCATCCTCTTGCACACG
TTTCGTGCAGAAGTAGTCACTCTTGAGTGCGCGAACGGCCGGCAGTTGTC
AGCTGTTTGGGAAGGATCACAGATTCGCCGAATGGTTACTGTTTGGAAAT
TCATTGGTGCAGGGCTGTTGGCGGCGTCCCGAGACCATTTCTTTTGATGC
GCCCAAACAGAGCATCGACGTATACCATTCAAGCATCTTGCACGCTTTTA
ATTTTTTCACCCGTGCCGCTGCACGTGAAGATTGCTCTCCTTTTTGTGTA
CTGCTTTCATACAGTAGTGGCTACGGATACAGTAGTGGCTACGGTTAAAG
AGAGGGTTGGGACAAGCCAGCGACACTCGGTGAAGTCCGTTTTTTTTCTC
TTGAGTACCCTCTCTTGAGCCGTGTTCGCTACTGCTGTCGTAGTCTCAGC
TTCTCAACTCATGTTCTTGCTCTGCGCATTACAAGCATTTCTTGTGTCCT
TCTGTTTTTGTTTGTTTTTTTCTTGATCTGCAGGAGAGGGGGCTTGTTCA
CGACGCGATGCAGTGCTACCAGACGGCCATCAAGCTCCGACCGGACTTCG
CCATCGCCTACGGCAACCTCGCCAGCTGCTACTACGACTGCGGGTGAAGT
GAATGGCGTTGCTGCTTTGTGGTGGCTTGTTGTGGCTTGTACTCGTTGTT
GATGTTGTGCATGGTACCACAGCAGGCGATAGCTGCTACTACGACTGCGG
GTGAATGGCGTTGCTGCTTTGTGCTGGCTTGGCACTCGTTGTTGTTGTCG
TCGTCATGTTACTTGCCGTTGTCGTTGTGAGGTGTCGAAGGTTCGCCCCT
TTATGGCCCCGGAGCAGGAATCACACAAAATCCTCCATCTGAAGGCGCCT
CGTGTGGGTCTTTTGATCCGAGGGCCAAGAGGGAGACGGGCAGAACGCTT
CTAGACTATTTTGCGTTTGCAGACTATTCGGCTTTCACAACCGCAGCGTA
CCGGCACCCCTATCCCTAGTTGGCGCTTCGATCAACTCTGTACCTAAAAG
GGGAACAACAGCCGCTGCCTGTGTGTACTACCAAACTAAATTACCCTTTC
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTGCCGTGCGGGTTTAC
GCTCGAGGCGTGCAGGTGCCAGGACCTGGCCATCAAGACATTTCGGTACG
CGATCCAGCTCGAGCCGAACTTCCCGGACGCTTACAACAACCTCGGCAAC
GCCCTCAGAGAGTCCGGACAGTTGGAGGTGCTAACGGGGACACGGGGTGT
GCTGCTGTCCACATGTGTCTCTGGGAAACGCCAGGGCAATATTAACTGTG
ATTTTCATATATTGTGTTTGGGGCTTCAATTGTGCGTGCTTTGTTTGTGT
GGATGTTATGTAGTGGCAGCTGCCGCCACGGTACAGTTCCCCAAGTATGT
ATCGTTGCCAGCGTCTGGATTGTGCTCCGGGCGCATGTGCACGTTCGTGA
GTGCATGCGGAAATGGGCGGGGGGTTGTTAGGGTAGGTGTCGGTCTCACC
GCCACTGGTGCTCAGCAGGACGAAGTGAACGAATGAATGCACATTCGGTG
CCTCGGGCCGTTTTGGAGCTGGCGATTCCAAGTGCGTGAAAGCAGCGCAC
TGCTGGTTCGCTTTTTTTTTTTGCGCCACGAAACGATGCGATGCGTGAAC
GATGGCATGTGTCGTGTCATGCGAAACACGCAGGAGGCGATAAACTGCTA
CCGGACTACCTTGCGGCTCAAGCCGGACCACCCCCACGCCTACAACAACC
TGGGGAATGCTATGAAGGACAAGGTATTATAGGTTATCGTGTCGCTGTCT
TTGGCTTTGTTGCGGTTCCTACCTGCTTCTACGCCTCTACAGTATAACCT
TTGGTTTGATTTTCAACCCATTTTTGTCGTTGTTTGCTTCATTTTTGTTT
GCGTCCGAGGAGTGTAGACGGCTACTTGTTCATTCGCTTACATGTGCCCA
GGTATAACGGTCAGTTCGTCTAACTGGCAGGCATCAAAATGTCGACGCTG
GGCAAGAATCAGCTGCCGACCACTGCGTAACTGAGCTCCGCCCTTTTCAT
TTGCACGACAGCCATGAGAGATCGAGCAATGAATCCACATTTTATTTTCT
GTGGTTGTTGTAATAGTATTTGACCCCTTGCTTTAAAAATTATCACCTCA
CAAGTGCTGTGCGGACCCTCGTGTCCGACCACAGTAGCAGGTTGTTGTCG
AGTAGCAGGCACACACCGACTTGGCTGCGAACGGCAAGAAGGGGGCTTTT
TCATCTTTGGCGTAAGATGAAGTTAGTGAGAATCAGTATGCCGACAAGGG
GGATTCACTGCAGACAGACCCTCCTCCCCGATGCAAACATGGACACGTTA
CGGTACACGGGTGTACGGTACGGTACCTTTTTCCAGGGTCTGATCAAGGA
GGCCATACACTGCTACGTGACGGCGGTGCAGCTGATGCCCAAGTTCGCGG
CCGTGCACAGCAACCTCGGCAGCGTGCTCAAGGAGCAGGGCAAGCTGGTG
AGAGAGAGAGCGAAAGAGCGTGGTAGGGGAAGGGAGACAAGTCGCGGGGG
GTGTTATGACGTCACGGGTGAGCGTGGAATAGGAGAGGTAGGGAAATGGG
AGAGGTGGCGTTCCTGAACAAGATGAAGTTGAGAGGGATGAGATGAGATG
AGGCAAGGGTCCAGGGAGGGCGGCTGCGGGAAAGGTGGGATAGTGTAGTA
TGTGGGGCTTCCTTGTGATGCTTAGCTTCCGGTTGGTGGGGGGGCTGACG
TCACGGCCGGAGTGAAATTGGAGACAGAACGAGGTCATTTTGAAGACGGG
AGAAAGGGCGGAGTGCCGCATTAGCACATGGGTTTGGCTCTTGATGCTAA
TCTTCTATTGTAGAGTAATAAGGACCCAAGCTCGTGGGAAATTGCTCGAT
TTGTGGTTCCTATCTTGTATATCATATCCTTGCTCGGCTCGTTCCCGAGG
AGAAGAAGGCGCTGCCCCCGAGAGATCGTTGGCGGGGGGGGCGCACACGG
CACCAGGCCATGTGTGTATTATAGTACGGGCAGGACCACAGACCGGCACA
AGGACGGCTCACCCATTCCATACTCCATACTTTCTTTTAAAGATCCATAT
TCGATAGATTCATTAAATGATATAGCGTATATATCCAATATGTGCATCAA
GTGATCCTCGCTGTGGAGACAGAACACTCACTACAGGTACAGGTTTCTGC
CATCCCCTCCTTAATTCTGATTGGCGTTTTATTGGCAATGAACGACGAAG
GGACACGCGCTGGCGCACTACCACGAAGCCATCGCGATCGACCCCGGCTT
CGCCGACGCCTACAGCAACATGGGCAACGCCTACAAGGACATGGGCCGGC
TCCCTGAGGCCATCAAATGCTACAGGTACTACAGCAGTAGACGGATGGCA
TTTTATCGAGAACGTTTTTACTGCAAGACGCGGCTGTGCTGCTGCGTTAG
AGCACGGGCCACCGGAGGCAGTAACATGTCAATGTGAACGTTTACATGGA
AGAAGCGTCTCGTGTATAAGCGGCGGTTGAGTGTATACCCCAGTCCACTA
GAGGGTAAAAGCACGATTGTTCACTAAACTAGAACAACAATCGTGCAGCA
AGAGTCGCGAATTCCTCTCGTACTGCGATTGTTATCCGCGGCCGAGGAAG
GAGATCTGCACCAGAAAGGCAAGCCGACCTCGGATGTGTGCGTGTCGGCC
GTGAGCTCTCTCTTCCTTCTGTTTCACAGCCGACGTATACTTTTGTTGCT
GCACCCGGCCCACCCACAACGCCGTTTATTTTGCGCCTGCATAGTTTCCC
GTTGTTGTGTGTGCGTGTTTGCATGTGTTTGTTTTTGCCTTGATGTCAAC
GACGACATGACACGACACGACCTGCTCGTGTCATGGAGCAATCAATCAAT
CAATTTCACCGCACACCGGTGACAACACCCCGTATTTTGTATTTTGTGTT
TCCACCTTACCCGGCTGCCGCCTTGTGCCCGTCTTTCTTCTCCCGAACGC
ATGCGTCTATACGATCTATCTTCCCCAATGATTGCGTCTTCTCTCCCTAA
CGCTTGCATCTTGTTCTCTCTCTCTCTGCCTCTCTCTCTCTCATCAGCGC
GGCAATTAATATCAAGCCTACGTTCGCCGACGCCTTCAGCAACCTCGCCA
GCGCTTACAAGGTGAAACAACTTACTCCCCTTATCCTCCCCGTTCGACAC
GCCTCCCTCAATCCATATGCATGCGTCATTGTGATGGATTATGATAGTTT
GGACTCTTGGTGTTGTCACTCACTCGTGTGGGTTGTGGCCTGTCATCTCG
TCTGAAGTGATGGATGTCACGTCGTGGTTGTACGCTGGTCGTTACTTCGC
GGCTGCTGCTGCACTATTATGAAGGCAAAGATTCCCTCAGGCGGAGCAGG
AAGTGAAAAACATGAAGCAACCTTTGGATCACTTTTCCCACCATTTTTTG
TTGTCCCTTCACGCCTCTTCATGCTTGGGAGACCGACCGACCGCTGCGTC
GCTCTCCCGCCGTCGGGTGGTGCTTCCAACTGTTCCAATCAAACCGACGT
TTCCTTACCTGTCATCTCGAGGGGACATGAAAACCTTCCGGGCCACCTTC
ACGAGAAATTGGGAATACAAAATAGTATGTGAATGCATATGAGGAACTAC
AACAGGGAGAGGGTACGCAGACCGCACACCTAAACCTAATTATGCTTCCC
CGATTGCATGCTTGATCGAACATGTTCACTTCAAACGAAGAACCCTGCAA
AGGCTGCTTGACCTTCCTTCGGTCCCAGCAGCATGACTCTCTCTCCTTTG
ACATCTGGAGAATCACATCTCTCCGTCGGGTTGTGCCGTATTGCTCATCC
GACCGTGTCTGTCTGTCCTCTTTGCCGTTTTGTTGTTGCCGTTACAGGAG
GGCAACGACGTCCTCCAGGCGATCGCGTGCTACCGGAAGGCCCTGGCGCT
GAGGCCCGACTTTCCGGACGCGTTCGCCAACCTCGTGCACTCGCTGGTGT
TCGTGTGCGACTGGTCCAACCGAGACGACGACTTCGCTGCCCTCAAGAAG
ATGCTGGCCACGCAGGTGCGGCGACAAAAGACGATTCGCTGCTGTTTCGT
CGTTTGTTTGTTTTTTTCTTTTCCTTCTTTGGCTTTGCTCAAGACAGCCT
TCTCAGGCGTTGAACTGACGCGCACCTTTTCCTCCTGCCTTTTTTCTAGT
GCTTTATTATTCATTTCCACCGTCGGCGCTGTTGGTGTACGTTTTCCTTT
TGTCCTCGTAGTGTGTTCTCTCACAAGGCAAAGTGTCTTTGCTGTGATTT
GAATATGATTCGAAGGTCCCCTCGTCTTAGCGTGTTAACCCTGTTGCCCG
GCCCGGCCCGTGTCTTGGTCTCCATCGGTGGATTTCGATCTTTTCTTTTT
TCGTCCTTTCTCAGATGGCGACGGAGAACATGCTCCCGTCCGTGCAACCC
TTCCACGCCATGGCCTACCCCCTCTCCCTGTCGGAGATGCAGCAGGTGCG
GTACATGCATACAAGCGTACATCATGTGCTTTTTTTCCCTGTTTTTGCGG
TATAGTACAGTAGCGGAGCGGGGGCTACGCGAGATCACTTATTGGTTGCC
CTGGGTTTTCCAGTATTGATTTTTTTATTAGTCCTTTTGTTTACGCGACA
AACGTCAGTTTGTTCCGTCTACGGTAAACAAGCTTAGTTAGCTCTTAGCA
CCTTAGCCCACCTCTGTGCGGCGAAATTGAAGGTCTTGTGTTTGGAGCGT
GTGTTGGTCCTACGAAAAGAATGTCCCCCGTGTGCTGTGTGCAGGCCTGT
AGATGTGCACCTTTGCCAAGGCGGAGTCCCGCAGGGGACGGCTTTGAGGC
TGCCGTGACTTGATTGCGCGGAAATGATCTCCCTCGATCTCTCGCCTCGT
TACTCCATACGCTCTGCCTGCCCCGCTATTTTCGCAATTGAAAACATGGC
ACCGTCACACAGAATGCGAATGCCATCAACACATCAACCGAAACCAAGTG
TAGATGACAAGTACAACAAGCTGCACACAGAGACACCGGGTGCATACAAG
ACATAAAGACTGACGACTGTTCGTCTTCATCATCGGTCAGCAGCCGGTTA
GGTTAGCGCGATTGGCGCTATTTCGAAAACGCACACACGTCCAACCAAAG
AGAAAAACTAAAAAAGGCTCAAATGTCTGCTTCGGGGTTTTGCTTTTGCC
CCACCCTCCTCCTTTCCACTTACATATTTCGTTTTTCATACCGCTTGTAT
TTTTTTCCGTCTGACCTTGTTGCGTGCCTCGGTGGGCTTGCGGCTACAGA
TCAGCTGCAAGTACGCCGAGCGCGTGAAGATGAACGTGGCCCTCCTCGAA
ATGCCCGCCTTCCGATTTCACCGCAAAGCCAAGGAAGCTAGAATCAGGTG
GGTGCTCTCCGCGTGA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8091:240..6955-

>mRNA_E_fasciculatus_S2_contig8091.16248.1 ID=mRNA_E_fasciculatus_S2_contig8091.16248.1|Name=mRNA_E_fasciculatus_S2_contig8091.16248.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1077bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8091:240..6955- (Ectocarpus fasciculatus EfasUO2)
CAGGGTAACCTTACGACGGCGGTGGCCTACTACCGCGAGGCGATACGGCT
GTGCCCAGAGTTCGCCGACGCCCACAGCAATCTCGGGAACGTCCTCAAGG
AGAGGGGGCTTGTTCACGACGCGATGCAGTGCTACCAGACGGCCATCAAG
CTCCGACCGGACTTCGCCATCGCCTACGGCAACCTCGCCAGCTGCTACTA
CGACTGCGGGTGCCAGGACCTGGCCATCAAGACATTTCGGTACGCGATCC
AGCTCGAGCCGAACTTCCCGGACGCTTACAACAACCTCGGCAACGCCCTC
AGAGAGTCCGGACAGTTGGAGGAGGCGATAAACTGCTACCGGACTACCTT
GCGGCTCAAGCCGGACCACCCCCACGCCTACAACAACCTGGGGAATGCTA
TGAAGGACAAGGGTCTGATCAAGGAGGCCATACACTGCTACGTGACGGCG
GTGCAGCTGATGCCCAAGTTCGCGGCCGTGCACAGCAACCTCGGCAGCGT
GCTCAAGGAGCAGGGCAAGCTGGGACACGCGCTGGCGCACTACCACGAAG
CCATCGCGATCGACCCCGGCTTCGCCGACGCCTACAGCAACATGGGCAAC
GCCTACAAGGACATGGGCCGGCTCCCTGAGGCCATCAAATGCTACAGCGC
GGCAATTAATATCAAGCCTACGTTCGCCGACGCCTTCAGCAACCTCGCCA
GCGCTTACAAGGAGGGCAACGACGTCCTCCAGGCGATCGCGTGCTACCGG
AAGGCCCTGGCGCTGAGGCCCGACTTTCCGGACGCGTTCGCCAACCTCGT
GCACTCGCTGGTGTTCGTGTGCGACTGGTCCAACCGAGACGACGACTTCG
CTGCCCTCAAGAAGATGCTGGCCACGCAGATGGCGACGGAGAACATGCTC
CCGTCCGTGCAACCCTTCCACGCCATGGCCTACCCCCTCTCCCTGTCGGA
GATGCAGCAGATCAGCTGCAAGTACGCCGAGCGCGTGAAGATGAACGTGG
CCCTCCTCGAAATGCCCGCCTTCCGATTTCACCGCAAAGCCAAGGAAGCT
AGAATCAGGTGGGTGCTCTCCGCGTGA
back to top