mRNA_E_fasciculatus_S2_contig808.16237.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig808.16237.1
Unique NamemRNA_E_fasciculatus_S2_contig808.16237.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Match: Acetyltransferase ((Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI)

HSP 1 Score: 629 bits (1622), Expect = 3.440e-225
Identity = 304/363 (83.75%), Postives = 330/363 (90.91%), Query Frame = 1
Query:    1 RWGKSIGTTNGSLERPMGLGWTASARVGRGWLLACCLVACLKTASIHAAGPDAKPDDADNVIVHTMGLANDTVAGTLPPITKESSCSDMLAWLPPRPSPAVLFQVVSEGYARLEENFISNMELHSTFSRENLYLVCLDEESVTIFKGLGIRCVRYGCMGCPVTRHDIWVLRVEVTICLLNAGQDVLMSDADAIWLRDPTDDFASDEHRDSNIVASRAVMPLPLAHKWGATVCMGFAFFRAGGSAMQAFMTVMEEIANELGDDQRAVNEALNQLDVIWDPTSDMNFSQSTRPGTGVIENITSDGESLQVSLLPHNRYTRSCRKRPISNDTIVAHCVSTDKGAGMATWMKEAGLWNLPDDKDSGR 1089
            RW K+I +T+GS   PMG GWT S RV RGWLL  CLV CLKT+SIHAAGPDA+PD+ADNV+VHTMGLANDTVAGTLPPITK+SSCSDMLAWLPPR SPAV+FQVVSE YA LEENFISNMELHSTFSRENLYLVCLDEESV IF GLGIRCVRYGC+GCPV+R DIWVLR++VTICLLNAGQDVLMSDADAIWLRDPTDD ASD   DSN+VASRAVMP PL HKWGAT+CMGFAFFRAGGSAMQAFMTV+EEIANELG+DQ AVNEALN+LDV+WDP SDMNF+ +TRPGTGVIENIT DG SL+V+LLPHN+YTRSCR+ PISNDTIVAHCVS+DKG GMATWMKEA LWNLPDD DSGR
Sbjct:   60 RWFKNIDSTSGSPGCPMGTGWTTSVRVLRGWLLTWCLVVCLKTSSIHAAGPDAEPDEADNVVVHTMGLANDTVAGTLPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEENFISNMELHSTFSRENLYLVCLDEESVAIFDGLGIRCVRYGCLGCPVSRGDIWVLRIDVTICLLNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGSAMQAFMTVVEEIANELGNDQIAVNEALNKLDVVWDPMSDMNFTDNTRPGTGVIENITVDGGSLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPDDNDSGR 422          
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Match: Nucleotid_trans (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE)

HSP 1 Score: 595 bits (1533), Expect = 7.790e-213
Identity = 285/347 (82.13%), Postives = 316/347 (91.07%), Query Frame = 1
Query:   49 MGLGWTASARVGRGWLLACCLVACLKTASIHAAGPDAKPDDADNVIVHTMGLANDTVAGTLPPITKESSCSDMLAWLPPRPSPAVLFQVVSEGYARLEENFISNMELHSTFSRENLYLVCLDEESVTIFKGLGIRCVRYGCMGCPVTRHDIWVLRVEVTICLLNAGQDVLMSDADAIWLRDPTDDFASDEHRDSNIVASRAVMPLPLAHKWGATVCMGFAFFRAGGSAMQAFMTVMEEIANELGDDQRAVNEALNQLDVIWDPTSDMNFSQSTRPGTGVIENITSDGESLQVSLLPHNRYTRSCRKRPISNDTIVAHCVSTDKGAGMATWMKEAGLWNLPDDKDSGR 1089
            MG GWT S RV RGW+LA CL  CLKT+S  AAGP+A+PD+AD V+VHTMGLANDTVAGTLPPITK+SSCSDMLAWLPPR SPAV+FQVVSE YA LE NFISNMELHSTFSRENLYLVCLDEESV IF GLGIRCVRYGC+GCP++R D+WVLRVE T+CLLNAGQDVLMSDADAIWLRDPT+DFASD + DSN+VASRAVMP PL HKWGATVCMGFAFFRAGGSAMQAFMTV+ EI NELGDDQ+AVNEAL++L V+WDPTSDM+F+ STRPGTGVIENIT++G+ L+V+LLPHN+YTRSCR+ PISNDTIVAHCVS+DKG GMATWMKEA LWNLPDD DSGR
Sbjct:    1 MGTGWTTSVRVLRGWILAWCLAVCLKTSSTRAAGPNAEPDEADIVVVHTMGLANDTVAGTLPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEANFISNMELHSTFSRENLYLVCLDEESVAIFDGLGIRCVRYGCLGCPMSRLDVWVLRVEATLCLLNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGSAMQAFMTVVGEIVNELGDDQKAVNEALDKLGVVWDPTSDMDFTNSTRPGTGVIENITANGDPLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPDDNDSGR 347          
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Match: Nucleotid_trans (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 1.040e-160
Identity = 231/357 (64.71%), Postives = 279/357 (78.15%), Query Frame = 1
Query:   13 SIGTTNGSLERPMGLGWTASARVGRGWLLACCLVACLKTASIHAAGPDAKPDDADNVIVHTMGLANDTVAGTLPPITKESSCSDMLAWLPPRPSPAVLFQVVSEGYARLEENFISNMELHSTFSRENLYLVCLDEESVTIFKGLGIRCVRYGCMGCPVTRHDIWVLRVEVTICLLNAGQDVLMSDADAIWLRDPTDDFASDEHRDSNIVASRAVMPLPLAHKWGATVCMGFAFFRAGGSAMQAFMTVMEEIANELGDDQRAVNEALNQLDVIWDPTSDMNFSQSTRPGTGVIENITSDGESLQVSLLPHNRYTRSCRKRPISNDTIVAHCVSTDKGAGMATWMKEAGLWNLPDDKDS 1083
            S G TNGSLE  MG  WT  AR+   W+LAC LVA ++T S+ A GP A   D D V + TM  AN T  GTL  I++ +SC+D++AWLPP+  PAV+FQVVS+ Y  +++NFISNMELHSTFSREN+YL+CLDEESV  F  LGIRCVR+GCMGCPV+RH +W LR+EV++CLL AG DVLMSDADA+WL DP DDF SD++RDS+IVASR  MP+PL   WGAT+CMGF  FRAG +A+  FM V+ E   EL +DQ+AVN AL +LDV+WDPTSDM+FS STR G GV+ +I S GESL VSLLPHN+YTRSCR+ PIS +T+VAHC+STDKG GMATWMKEA LWN+PDD DS
Sbjct:   50 SNGPTNGSLEYAMGWDWTPCARMRWYWVLAC-LVALVRT-SVGAGGP-ADNRDEDKVTIQTMEWANATGTGTLLAISRHASCADIVAWLPPQLQPAVVFQVVSKAYVSVQKNFISNMELHSTFSRENMYLICLDEESVESFGALGIRCVRFGCMGCPVSRHHVWALRIEVSVCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRAGSNAIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPTSDMSFSDSTRSGVGVVNSIYS-GESLTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMATWMKEAHLWNVPDDNDS 402          
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Match: Nucleotid_trans (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 7.350e-77
Identity = 128/284 (45.07%), Postives = 176/284 (61.97%), Query Frame = 1
Query:  217 VAGTLPPITKESSCSDMLAWLPPRPSPAVLFQVVSEGYARLEENFISNMELHSTFSRENLYLVCLDEESVTIFKG-LGIRCVRYGCMGCPVTRHDIWVLRVEVTICLLNAGQDVLMSDADAIWLRDPTDDFASDEHRDSNIVASRAVMPLPLAHKWGATVCMGFAFFRAGGSAMQA-FMTVMEEIANELGDDQRAVNEALNQLDVIWDPTSDMNFSQSTRPGTGVIENITSDG-ESLQVSLLPHNRYTRSCRKRPISNDTIVAHCVSTDKGAGMATWMKEAGLW 1059
            V+  LP IT +++C+D + W+PPR  PA++ QVVS  Y  LE NFI  MEL+S  +R++LYL+C+D  SV  F+  + IRC+       P +  +IWVLR  V  CL+ AGQDV+MSDADA+WL DP  DF      DS++VASR   P PL  +WGAT+CMGF  FRA G  +   F+ VM+ + ++  DDQ +VN A   L ++WD  SDM + +S   G G I+ +  +  +   V+LLPHN YTR C + PISN T+VAHC +         WM ++ LW
Sbjct:   31 VSRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFP-SHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLW 313          
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Match: Nucleotid_trans (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 2.650e-74
Identity = 142/318 (44.65%), Postives = 185/318 (58.18%), Query Frame = 1
Query:  226 TLPPITKESSCSDMLAWLPPRPSPAVLFQVVSEGYARLEENFISNMELHSTFSRENLYLVCLDEESVTIFKG-LGIRCVRYGCMGCPVTRHDIWVLRVEVTICLLNAGQ-DVLMSDADAIWLRDPTDD-FASDEHRDSNIVASRAVMPLPLAHKWGATVCMGFAFFRAGGSA-MQAFMTVMEEIANELGDDQRAVNEALNQLDVIWDPTSDMNFSQSTRPGTGVI------ENITSDGES-----------------------LQVSLLPHNRYTRSCRKRPISNDT-IVAHCVSTDKGAGMAT-WMKEAGLWNLPDD 1074
            TLP ITK+++C D  AW+PPR  PAV+ QVVSEGY  +E NFI  ME +S F+R N+YL+C+D+ S   F   +GIRCV    +  P   H IW LRV V  CLL  G  DV+MSDADA+WL DP  D F+  +    +IVASR   P     +WG+T+CMGF  FRA   A M+ F+ VM ++  +  DDQ +VN A  QL ++WD  SDM + +ST  G G+I       N TS G                          +V+LLPH+ YTR C +R +SN T +VAHC    K AG+ T WMK+A LW++ DD
Sbjct:   26 TLPAITKDATCVDWAAWIPPRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPMSALDLPTHEH-IWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKNSDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSVQDD 342          
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Match: Nucleotid_trans (domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.020e-43
Identity = 84/184 (45.65%), Postives = 113/184 (61.41%), Query Frame = 1
Query:  535 LNAGQDVLMSDADAIWLRDPTDDFASDEHRDSNIVASRAVMPLPLAHKWGATVCMGFAFFRAGGS--AMQAFMTVMEEIANELGDDQRAVNEALNQLDVIWDPT-SDMNFSQSTRPGTGVIENITSD-GESLQVSLLPHNRYTRSCRKRPISNDTIVAHCVSTDKGAGMATWMKEAGLWNLPDD 1074
            + AG DV+MSDADA+WL DP  DF+      S+IVASR   P  + H WGAT+CMGF  FR   S  AM+ F+TVM  +  E  DDQ AVN A   L ++W+   SDM +++ST  G G I++++ D  +   V+LLPH+ YTR C   P+SN T+VAHC+S+      A WM    LW + +D
Sbjct:   64 VEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDED 247          
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Match: Nucleotid_trans (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 6.350e-36
Identity = 95/258 (36.82%), Postives = 124/258 (48.06%), Query Frame = 1
Query:  313 VVSEGYARLEENFISNMELHSTFSRENLYLVCLDEESVTIFKG-LGIRCVRYGCMGCPVTRHDIWVLRVEVTICLLNAGQ-DVLMSDADAIWLRDPTDD-FASDEHRDSNIVASRAVMPLPLAHKWGATVCMGFAFFRAGGSA-MQAFMTVMEEIANELGDDQR-----------------------------------------------------AVNEALNQLDVIWDPTSDMNFSQSTRPGTGVIENITSDGES 915
            VVSEGY  +E NFI  ME +S F+R N+YL+C+D  S   F   +GIRCV    +  P T  DIW LRV+V  CLL  G  DV+MSDADA+WL DP  D F+       +I+ASR   P   + +WG+T+CMGF  FRA   A M+ F+ VM ++  +  DDQ                                                      +VN A  QL ++WD  SDM + +ST  G GVI  + S   S
Sbjct:    5 VVSEGYIDIERNFIRLMERNSGFTRSNIYLMCMDGASKNFFDAKMGIRCVPMSALDLP-THQDIWQLRVKVVSCLLEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRARNVAGMKRFLDVMADLVVQNKDDQMLCECATGVENDFCGFPASSRPRSNPTLTESAFCVAAPSPNASLILSIVSVEKISVNRAAKQLGIVWDKNSDMRYEESTGYGRGVIAGLGSSNNS 261          
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Match: Nucleotid_trans (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 4.400e-34
Identity = 74/150 (49.33%), Postives = 97/150 (64.67%), Query Frame = 1
Query:  361 MELHSTFSRENLYLVCLDEESVTIFKG-LGIRCVRYGCMGCPVTRHD-IWVLRVEVTICLLNAGQDVLMSDADAIWLRDPTDDFASDEHRDSNIVASRAVMPLPLAHKWGATVCMGFAFFRAGGS--AMQAFMTVMEEIANELGDDQRAV 798
            MEL ++F+R +LYL+CLD++S+  F+  +GI C+     G  ++ H+ IWVLRV V  CL  AG DV+MSDADA+WL DP  DF+     DS+IVASR   P  +   WGAT+CMGF  FRA  +  AM  F+TVM  +  E  DDQ AV
Sbjct:    1 MELRTSFTRNHLYLMCLDDDSLHFFESFMGIHCIPLS--GLNISSHEQIWVLRVRVVSCLAEAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148          
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Match: Nucleotid_trans (domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCA2_DIALT)

HSP 1 Score: 113 bits (282), Expect = 7.140e-25
Identity = 84/285 (29.47%), Postives = 135/285 (47.37%), Query Frame = 1
Query:  235 PITKESSCSDMLAWLPPRPSPA--VLFQVVSEGYARLEENFISNMELHSTFSRENLYLVCLDEESVTIFKGLGIRCVRYGCMGCPVTRHDIWVLRVEVTICLLNAGQDVLMSDADAIWLRDPTDDFASDEHRDSNIVASRAVMPLPLAH-KWGATVCMGFAFFRAGGSAMQAFMTVMEEIANELGDDQRAVNEALNQLDVIWDPTSDMNFSQSTRPGTGVI--ENITSDGESLQVSLLPHNRYTRSCRKRPISNDTIVAHCVSTDKGAGMATWMKEA-GLWNLPD 1071
            P+  + + + + + +PP P     V+  V++  Y R+ ENFI     H   + E  +++C D  +      LG RC      G    +  ++  R+     L++ G+DVL++D DAIWL DP  D  + +   + I+ SR   P    H  WGA++CMGF FFR     ++A M V+ E   E   DQ   N  + +  ++WD    + F  S     G +  +N  +    L+V++LPH  Y R C  +   +  I+AHC S  K A +      A  LW +P+
Sbjct:   26 PVALKDTGAPVASLVPPVPGVPRPVVVMVLNSAYTRVFENFIRAPGAHHLAAWET-HIICTDRATAVSLAKLGWRCQDTVKTGRSAAQ--VYTRRIPYVAHLVHLGRDVLITDVDAIWLGDPLPDIMATQ---AGIIGSRGRSP----HLDWGASLCMGFIFFRGSDPLVRAAMPVLTEPMRE---DQTDFNHNMQRERLVWDEGR-VRFVDSIDTSFGTLRPKNANAGHAGLRVAMLPHKSYVRICEDKVDYSTVIIAHCHSRGKRAHLKVQSLGAKNLWYIPE 296          
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXH7_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.020e-21
Identity = 69/226 (30.53%), Postives = 111/226 (49.12%), Query Frame = 1
Query:  400 LVCLDEESVTIFKGLGIRCVRYGCMGCPVT------RHDIWVLRVEVTICLLN-AGQDVLMSDADAIWLRDPTDDFASDEHRDSNIVASRAVMPLPLAHKWGATVCMGFAFFRAGGSAM----QAFMTVMEEIAN-ELGDDQRAVNEALNQLDVIWDPTSDMNFSQSTRPGTGVIENITS---DGESLQVSLLPHNRYTRSCR----------KRPISNDTIVAHC 1002
            ++C+D+ S      +G+ CV         +      +H+IW+ R+E+   L+N   QDV+++D D++W+  P +D  S     S+IV+SRA  P  L   WGAT+CMGF +F+A   +     + ++T+ + I N    DDQ   NE L +  + W       F +    G   I NI S   +  S  ++LLPH +Y R+C           K+   ND ++ HC
Sbjct:    1 IICIDDSSFNQLLDIGLYCVLSNNFVSDKSFNKNDYKHNIWLRRIEILSHLINNENQDVILTDLDSLWINSPLNDI-SIHSASSSIVSSRAWWPHELWSVWGATLCMGFIYFKADEFSKYFVNKIYLTMSDNINNYRKVDDQITANEELYKNQIEW-------FDKPMSVGNNAIANIGSISYNNMSYSITLLPHYKYIRNCNNLTDYTNRNEKKSRFNDIVILHC 218          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig808.16237.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
Acetyltransferase3.440e-22583.75(Isoleucine patch superfamily protein) n=1 Tax=Ect... [more]
Nucleotid_trans7.790e-21382.13domain-containing protein n=2 Tax=Ectocarpus sp. C... [more]
Nucleotid_trans1.040e-16064.71domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Nucleotid_trans7.350e-7745.07domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Nucleotid_trans2.650e-7444.65domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Nucleotid_trans1.020e-4345.65domain-containing protein n=2 Tax=Ectocarpus silic... [more]
Nucleotid_trans6.350e-3636.82domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Nucleotid_trans4.400e-3449.33domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Nucleotid_trans7.140e-2529.47domain-containing protein n=1 Tax=Diacronema luthe... [more]
Hypothetical1.020e-2130.53protein (Fragment) n=2 Tax=Chromulina nebulosa Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig808contigE_fasciculatus_S2_contig808:11991..13085 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score632.5
Seed ortholog evalue1.2e-178
Seed eggNOG ortholog2880.D7FGV6
Model size1095
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.Nucleotide-diphospho-sugar transferase
EggNOG OGs2C6NG@1,2SGR5@2759
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferase
Ec32 orthologEc-11_000810.1
Cds size1095
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842468.5685337-CDS-E_fasciculatus_S2_contig808:11990..130851696842468.5685337-CDS-E_fasciculatus_S2_contig808:11990..13085Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig808 11991..13085 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig808.16237.1prot_E_fasciculatus_S2_contig808.16237.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig808 11991..13085 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig808.16237.1

>prot_E_fasciculatus_S2_contig808.16237.1 ID=prot_E_fasciculatus_S2_contig808.16237.1|Name=mRNA_E_fasciculatus_S2_contig808.16237.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=365bp
RWGKSIGTTNGSLERPMGLGWTASARVGRGWLLACCLVACLKTASIHAAG
PDAKPDDADNVIVHTMGLANDTVAGTLPPITKESSCSDMLAWLPPRPSPA
VLFQVVSEGYARLEENFISNMELHSTFSRENLYLVCLDEESVTIFKGLGI
RCVRYGCMGCPVTRHDIWVLRVEVTICLLNAGQDVLMSDADAIWLRDPTD
DFASDEHRDSNIVASRAVMPLPLAHKWGATVCMGFAFFRAGGSAMQAFMT
VMEEIANELGDDQRAVNEALNQLDVIWDPTSDMNFSQSTRPGTGVIENIT
SDGESLQVSLLPHNRYTRSCRKRPISNDTIVAHCVSTDKGAGMATWMKEA
GLWNLPDDKDSGRG*
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mRNA from alignment at E_fasciculatus_S2_contig808:11991..13085-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig808.16237.1 ID=mRNA_E_fasciculatus_S2_contig808.16237.1|Name=mRNA_E_fasciculatus_S2_contig808.16237.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1095bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig808:11991..13085- (Ectocarpus fasciculatus EfasUO2)
AGGTGGGGCAAGAGCATCGGTACGACGAACGGTTCGCTGGAGCGCCCAAT GGGGTTGGGGTGGACAGCAAGCGCACGGGTGGGAAGGGGTTGGCTACTTG CTTGCTGTCTGGTGGCGTGTCTGAAGACAGCATCCATACATGCCGCCGGG CCGGACGCCAAGCCGGACGATGCCGACAACGTTATCGTCCATACGATGGG GTTGGCCAACGACACTGTCGCGGGCACCCTTCCGCCCATAACAAAGGAAT CTTCTTGCTCTGATATGCTTGCTTGGTTACCTCCTCGACCAAGCCCGGCG GTGTTGTTCCAGGTTGTGTCCGAAGGTTACGCCCGCCTGGAAGAGAATTT TATATCAAACATGGAGCTTCATTCGACATTCTCCCGAGAAAACCTGTACC TGGTTTGCCTCGACGAGGAATCTGTGACAATTTTCAAGGGGCTCGGGATA CGTTGTGTGCGATATGGCTGTATGGGATGCCCAGTGACACGCCACGATAT ATGGGTTCTGAGGGTTGAAGTGACTATATGCCTGTTGAACGCTGGCCAAG ATGTATTGATGTCGGATGCCGATGCAATTTGGCTCCGCGATCCGACGGAC GACTTTGCTTCAGATGAACATCGGGACAGCAACATTGTTGCATCGAGGGC CGTAATGCCTCTCCCGTTGGCTCACAAGTGGGGAGCGACTGTCTGCATGG GGTTTGCTTTCTTCCGGGCTGGTGGCAGCGCCATGCAGGCGTTCATGACG GTCATGGAGGAAATCGCGAATGAGTTGGGAGACGATCAAAGAGCGGTGAA TGAAGCGTTGAATCAGCTCGATGTCATTTGGGATCCAACGAGTGATATGA ATTTCAGTCAGAGCACGCGACCAGGGACGGGCGTGATTGAAAATATCACT AGTGATGGGGAGTCATTGCAAGTATCTCTACTGCCGCACAACCGGTACAC ACGAAGCTGCCGGAAGAGACCAATCTCTAACGACACGATCGTGGCGCACT GTGTCAGCACTGACAAAGGAGCAGGGATGGCTACGTGGATGAAGGAGGCA GGCCTGTGGAACCTTCCAGACGATAAAGATAGCGGCAGAGGTTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig808:11991..13085-

>mRNA_E_fasciculatus_S2_contig808.16237.1 ID=mRNA_E_fasciculatus_S2_contig808.16237.1|Name=mRNA_E_fasciculatus_S2_contig808.16237.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1095bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig808:11991..13085- (Ectocarpus fasciculatus EfasUO2)
AGGTGGGGCAAGAGCATCGGTACGACGAACGGTTCGCTGGAGCGCCCAAT
GGGGTTGGGGTGGACAGCAAGCGCACGGGTGGGAAGGGGTTGGCTACTTG
CTTGCTGTCTGGTGGCGTGTCTGAAGACAGCATCCATACATGCCGCCGGG
CCGGACGCCAAGCCGGACGATGCCGACAACGTTATCGTCCATACGATGGG
GTTGGCCAACGACACTGTCGCGGGCACCCTTCCGCCCATAACAAAGGAAT
CTTCTTGCTCTGATATGCTTGCTTGGTTACCTCCTCGACCAAGCCCGGCG
GTGTTGTTCCAGGTTGTGTCCGAAGGTTACGCCCGCCTGGAAGAGAATTT
TATATCAAACATGGAGCTTCATTCGACATTCTCCCGAGAAAACCTGTACC
TGGTTTGCCTCGACGAGGAATCTGTGACAATTTTCAAGGGGCTCGGGATA
CGTTGTGTGCGATATGGCTGTATGGGATGCCCAGTGACACGCCACGATAT
ATGGGTTCTGAGGGTTGAAGTGACTATATGCCTGTTGAACGCTGGCCAAG
ATGTATTGATGTCGGATGCCGATGCAATTTGGCTCCGCGATCCGACGGAC
GACTTTGCTTCAGATGAACATCGGGACAGCAACATTGTTGCATCGAGGGC
CGTAATGCCTCTCCCGTTGGCTCACAAGTGGGGAGCGACTGTCTGCATGG
GGTTTGCTTTCTTCCGGGCTGGTGGCAGCGCCATGCAGGCGTTCATGACG
GTCATGGAGGAAATCGCGAATGAGTTGGGAGACGATCAAAGAGCGGTGAA
TGAAGCGTTGAATCAGCTCGATGTCATTTGGGATCCAACGAGTGATATGA
ATTTCAGTCAGAGCACGCGACCAGGGACGGGCGTGATTGAAAATATCACT
AGTGATGGGGAGTCATTGCAAGTATCTCTACTGCCGCACAACCGGTACAC
ACGAAGCTGCCGGAAGAGACCAATCTCTAACGACACGATCGTGGCGCACT
GTGTCAGCACTGACAAAGGAGCAGGGATGGCTACGTGGATGAAGGAGGCA
GGCCTGTGGAACCTTCCAGACGATAAAGATAGCGGCAGAGGTTGA
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