mRNA_E_fasciculatus_S2_contig806.16221.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Cytochrome (b5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS97_ECTSI) HSP 1 Score: 535 bits (1379), Expect = 1.180e-190 Identity = 263/277 (94.95%), Postives = 267/277 (96.39%), Query Frame = 1
Query: 1 MTENAPTGDQDDTSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
MT+NA TGDQDD+SSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKK KP+GI G DKSSNKA STK VKE DGNGRLEECENA +PRTFVDPQTGLT PYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA
Sbjct: 1 MTDNATTGDQDDSSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKPKPRGIGGSDKSSNKALSTKIVKEGDDGNGRLEECENASDPRTFVDPQTGLTTPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 277
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWF6_9PHAE) HSP 1 Score: 413 bits (1062), Expect = 1.510e-142 Identity = 224/280 (80.00%), Postives = 240/280 (85.71%), Query Frame = 1
Query: 1 MTENAPTGDQDDTSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMG-RFLHVPPNFPTTKWS-TSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQ-ERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
MT N+ TGDQDD+SS KARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKP+GI GGD+S+NKA STKTVKE GDGNGRLEECENA EPRTFVDPQTGLT PYLPMG + +PPN T S T+ LP R+ +KLTRKARPLRVVNILSRQEDQLLVACEDTIADIQ ER+L A++ +L +KFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMP+LHIYFNDDLTIA
Sbjct: 1 MTVNSTTGDQDDSSSQKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPRGIGGGDRSNNKALSTKTVKEGGDGNGRLEECENASEPRTFVDPQTGLTTPYLPMGSQPTRIPPNLGTACDSLTTVTLP-----HRI--EKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQDERFLGVGANSV-----LLHLQKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPILHIYFNDDLTIA 268
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Cytochrome (b5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C925_9STRA) HSP 1 Score: 279 bits (714), Expect = 2.580e-90 Identity = 144/263 (54.75%), Postives = 175/263 (66.54%), Query Frame = 1
Query: 55 RFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVL----QDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
R++TP+DVA HNCAEDCW+S +VLDLT LI +RGPLA+P+IAAAG+D+SHWF+ P T G+P+T +DP TGLT+ Y P GRF+HVPPNFPTT W T FG PWW+D + VVG LT +AR +R+VN+L++QED+LLV+CEDT+A IQ RY E NAHA SYTWK L QD KFVP M++TLEENG+VDD AF KLG D D PVLHIYFNDDLT+A
Sbjct: 13 RYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFN-------------------------PKT-------------------GDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGT-LTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 230
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F938_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.720e-77 Identity = 123/259 (47.49%), Postives = 160/259 (61.78%), Query Frame = 1
Query: 49 KARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLT 825
K RFYTP+D+A HNCA+D W+S+ +V DLTELI ANRGPLA PLI AG D+SHWF D K G +TF+DP G+ +PY P GRFLHVPP PT W+T FG WW D ++G+ LT K R +++VN+L+ Q D L V E+T+ +I++RY+EYN HA SYTWK L+++ FVP M++TL+ENG+ D+ F+KLGID D Y PV+H+YFNDDLT
Sbjct: 3 KRRFYTPEDLAAHNCAKDIWVSINYKVFDLTELIQANRGPLAQPLIEVAGQDISHWF------DSK--------------------------------------TGGVKTFMDPSRGVRVPYTPHGRFLHVPPPEPTAAWNTDFGTAWWLDEDLIIGR-LTEKTRKVQIVNVLTHQTDLLTVCSEETLEEIRDRYMEYNKHAQSYTWKKLEEDAFVPMDMEKTLDENGVPDESEEFDKLGIDFDYYYPVIHVYFNDDLT 216
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC11_GLOUD) HSP 1 Score: 237 bits (605), Expect = 7.550e-74 Identity = 127/261 (48.66%), Postives = 158/261 (60.54%), Query Frame = 1
Query: 49 KARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
K R+YTP +VA N A DCW+S+ +VLDL+ELI+ NRG L PL+ AG D+SHWF P T+ +K VDP+ ++ P+LP GRFLHV P P W TS LPWW+D K VGK LTRKAR + VVN+L++Q L V CE+TI DIQ RYLE N+HAASYTWK L D++FVP KM+ TLEENGI D+ L FE L +D+ Y P+LH+YFNDDLT+A
Sbjct: 15 KLRYYTPHEVAARNQAHDCWVSINHRVLDLSELIMDNRGILTQPLVLHAGEDISHWFD-------------------------PETEDIK-------------------YHVDPERNISFPFLPYGRFLHVAPLEPLGDWKTSDFLPWWKDPKYTVGK-LTRKARWIEVVNVLTQQRHSLQVCCEETIHDIQTRYLEMNSHAASYTWKYLDDDEFVPLKMNCTLEENGIPDESLMFEHLDMDEHQYKPILHLYFNDDLTVA 230
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C328_9STRA) HSP 1 Score: 235 bits (600), Expect = 3.880e-73 Identity = 114/261 (43.68%), Postives = 161/261 (61.69%), Query Frame = 1
Query: 49 KARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
+ R+YTP DVA HN A DC +S+F +V DLT+LI N+GPLA PL+ AG D+SHWF N + +T++DP G+T+PY P GRF+ VPP+ PT WSTSFG+PWW++ +VG+ L+ K R + +VN+L++Q+D L V E+T+ +I++RY+EYN HA SYTWK L + KFV M +TL+ENG++D+ FE+L ID+D Y P++H+YF D+LTIA
Sbjct: 12 RRRYYTPGDVAAHNSATDCLVSIFHRVFDLTDLIRDNQGPLAQPLVEVAGQDISHWF--------------------------------------------TNNPVQCKTYIDPDRGMTLPYTPHGRFIDVPPSEPTASWSTSFGIPWWQNEDIIVGR-LSEKTRKIMIVNVLTQQKDVLEVCSEETMLEIRDRYMEYNKHAESYTWKKLHEGKFVVMNMQKTLDENGVIDESDDFEELEIDEDFYYPIIHVYFEDNLTIA 227
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLP1_PYTOL) HSP 1 Score: 234 bits (596), Expect = 2.370e-72 Identity = 124/265 (46.79%), Postives = 159/265 (60.00%), Query Frame = 1
Query: 37 TSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
T + R+YTP +VA+HN EDCW+S+F ++LDL+ELI +RG L PLI AG D+SHWF P+T+ V R VD + +P+LP GRFL+VPP PT+ WST+ +PWW+D K VVGK LT K R + +VN+L++Q L V CE+TI +IQ RYL +NAHA SYTWK L D+ FVP M QTLEENGI D+ FEKL +D+ Y P L+IYFNDDLT+A
Sbjct: 21 TRTRALRYYTPREVAMHNTGEDCWVSIFHRILDLSELIQEHRGLLTQPLILHAGEDISHWFD-------------------------PATQDV-------------------RKHVDAGRNVELPFLPYGRFLNVPPPEPTSNWSTTDAVPWWKDAKYVVGK-LTTKVRWIEIVNVLTQQHHALEVCCEETIEEIQARYLRFNAHARSYTWKYLDDDDFVPLNMKQTLEENGIPDESPLFEKLDMDEQQYKPSLYIYFNDDLTVA 240
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHL5_9STRA) HSP 1 Score: 234 bits (596), Expect = 2.970e-72 Identity = 117/259 (45.17%), Postives = 157/259 (60.62%), Query Frame = 1
Query: 55 RFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
R+YTP++VA HN A D W+S+F +VL+LT+L+ +RG L PLI AAG D+SHWF E G +T +DP G+ +PY P GRFLHV P PT WST PWW+D V+GK LT+K R +++VN++S+Q D L V E+TI++I++RY+EYN HA+SYTWK L FV M++TL ENG+VD+ FE+LGI+DD Y P+LH+YFNDDLT+A
Sbjct: 34 RYYTPEEVAAHNSAGDLWVSVFHRVLNLTDLVREHRGELTVPLIEAAGQDISHWFD--------------------------------------------EKTGNVKTRIDPGKGIRLPYTPQGRFLHVAPAEPTANWSTKIANPWWQDENLVIGK-LTQKTRKVQIVNVISQQTDLLTVCSEETISEIRDRYMEYNRHASSYTWKKLAQGTFVLLDMEKTLAENGVVDESEEFEELGIEDDFYYPILHVYFNDDLTVA 247
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JSH1_9STRA) HSP 1 Score: 233 bits (593), Expect = 4.550e-72 Identity = 118/264 (44.70%), Postives = 164/264 (62.12%), Query Frame = 1
Query: 34 DTSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLT 825
D++ + +F+TP +V++HN AEDCW+S+ +VLD++ LI NRGPL PLI AG D+SHWF P+T+ VK VDP+ L++P+LP GRFLHVPP PT +W T+ LPWWRD + +VG+ LT+K R L +VN+L++Q+ L V CE+T+A+IQ RYL NAHA SYTWK L+D++FVP M +TL+ENGI D+ FE+ +D+ + P LH+YF+DDLT
Sbjct: 8 DSAQRRPQFFTPREVSIHNLAEDCWVSINHRVLDVSSLIQENRGPLVQPLIHHAGEDISHWFD-------------------------PNTENVKH-------------------HVDPERNLSLPFLPYGRFLHVPPPDPTAQWRTADFLPWWRDPQYIVGR-LTKKVRWLEIVNVLTQQQHSLEVCCEETLAEIQTRYLRVNAHAGSYTWKHLEDDEFVPLYMQRTLDENGIPDESPTFERFDMDEQQFKPTLHLYFDDDLT 226
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ39_9STRA) HSP 1 Score: 226 bits (577), Expect = 2.780e-69 Identity = 125/291 (42.96%), Postives = 165/291 (56.70%), Query Frame = 1
Query: 49 KARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDG------------------------------YMPVLHIYFNDDLTIA 831
+ R+YTP+++ALHNCAEDCW+S+FG+V DLTE I ANRGPLA P+I +G DVSHWF D K TK V R +DP+T L +PYLPMGRFLHVPP FP++ W T FG PWW+D +G L++K R +R++N L+RQ D+L+V E+TI +IQ+R L YNAHAASYTWK L++ KF M +TL ENG++D+ F+ L +G Y+P L +Y+NDDLT+A
Sbjct: 10 RRRYYTPEEMALHNCAEDCWVSVFGKVYDLTEFIAANRGPLAQPIILMSGKDVSHWF------DEK-------------------TKYV-------------------RMHIDPETNLRLPYLPMGRFLHVPPAFPSSAWRTDFGTPWWQDADLCIGA-LSQKTRVVRIINALTRQADELIVPTEETIDEIQDRCLSYNAHAASYTWKSLREGKFEVLDMAKTLAENGVIDELDNFKMLDPKPEGFPPEETDLTESEKRIVEEANRYDESDIHAEYIPELVLYYNDDLTVA 255 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig806.16221.1 >prot_E_fasciculatus_S2_contig806.16221.1 ID=prot_E_fasciculatus_S2_contig806.16221.1|Name=mRNA_E_fasciculatus_S2_contig806.16221.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=278bp MTENAPTGDQDDTSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELIback to top mRNA from alignment at E_fasciculatus_S2_contig806:20367..24273+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig806.16221.1 ID=mRNA_E_fasciculatus_S2_contig806.16221.1|Name=mRNA_E_fasciculatus_S2_contig806.16221.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3907bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig806:20367..24273+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig806:20367..24273+ >mRNA_E_fasciculatus_S2_contig806.16221.1 ID=mRNA_E_fasciculatus_S2_contig806.16221.1|Name=mRNA_E_fasciculatus_S2_contig806.16221.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=834bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig806:20367..24273+ (Ectocarpus fasciculatus EfasUO2)back to top |