mRNA_E_fasciculatus_S2_contig806.16221.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig806.16221.1
Unique NamemRNA_E_fasciculatus_S2_contig806.16221.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Cytochrome (b5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS97_ECTSI)

HSP 1 Score: 535 bits (1379), Expect = 1.180e-190
Identity = 263/277 (94.95%), Postives = 267/277 (96.39%), Query Frame = 1
Query:    1 MTENAPTGDQDDTSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
            MT+NA TGDQDD+SSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKK KP+GI G DKSSNKA STK VKE  DGNGRLEECENA +PRTFVDPQTGLT PYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA
Sbjct:    1 MTDNATTGDQDDSSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKPKPRGIGGSDKSSNKALSTKIVKEGDDGNGRLEECENASDPRTFVDPQTGLTTPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 277          
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWF6_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 1.510e-142
Identity = 224/280 (80.00%), Postives = 240/280 (85.71%), Query Frame = 1
Query:    1 MTENAPTGDQDDTSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMG-RFLHVPPNFPTTKWS-TSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQ-ERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
            MT N+ TGDQDD+SS KARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKP+GI GGD+S+NKA STKTVKE GDGNGRLEECENA EPRTFVDPQTGLT PYLPMG +   +PPN  T   S T+  LP      R+  +KLTRKARPLRVVNILSRQEDQLLVACEDTIADIQ ER+L   A++      +L  +KFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMP+LHIYFNDDLTIA
Sbjct:    1 MTVNSTTGDQDDSSSQKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPRGIGGGDRSNNKALSTKTVKEGGDGNGRLEECENASEPRTFVDPQTGLTTPYLPMGSQPTRIPPNLGTACDSLTTVTLP-----HRI--EKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQDERFLGVGANSV-----LLHLQKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPILHIYFNDDLTIA 268          
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Cytochrome (b5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C925_9STRA)

HSP 1 Score: 279 bits (714), Expect = 2.580e-90
Identity = 144/263 (54.75%), Postives = 175/263 (66.54%), Query Frame = 1
Query:   55 RFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVL----QDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
            R++TP+DVA HNCAEDCW+S   +VLDLT LI  +RGPLA+P+IAAAG+D+SHWF+                         P T                   G+P+T +DP TGLT+ Y P GRF+HVPPNFPTT W T FG PWW+D + VVG  LT +AR +R+VN+L++QED+LLV+CEDT+A IQ RY E NAHA SYTWK L    QD KFVP  M++TLEENG+VDD  AF KLG D D   PVLHIYFNDDLT+A
Sbjct:   13 RYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFN-------------------------PKT-------------------GDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGT-LTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 230          
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F938_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.720e-77
Identity = 123/259 (47.49%), Postives = 160/259 (61.78%), Query Frame = 1
Query:   49 KARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLT 825
            K RFYTP+D+A HNCA+D W+S+  +V DLTELI ANRGPLA PLI  AG D+SHWF      D K                                       G  +TF+DP  G+ +PY P GRFLHVPP  PT  W+T FG  WW D   ++G+ LT K R +++VN+L+ Q D L V  E+T+ +I++RY+EYN HA SYTWK L+++ FVP  M++TL+ENG+ D+   F+KLGID D Y PV+H+YFNDDLT
Sbjct:    3 KRRFYTPEDLAAHNCAKDIWVSINYKVFDLTELIQANRGPLAQPLIEVAGQDISHWF------DSK--------------------------------------TGGVKTFMDPSRGVRVPYTPHGRFLHVPPPEPTAAWNTDFGTAWWLDEDLIIGR-LTEKTRKVQIVNVLTHQTDLLTVCSEETLEEIRDRYMEYNKHAQSYTWKKLEEDAFVPMDMEKTLDENGVPDESEEFDKLGIDFDYYYPVIHVYFNDDLT 216          
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC11_GLOUD)

HSP 1 Score: 237 bits (605), Expect = 7.550e-74
Identity = 127/261 (48.66%), Postives = 158/261 (60.54%), Query Frame = 1
Query:   49 KARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
            K R+YTP +VA  N A DCW+S+  +VLDL+ELI+ NRG L  PL+  AG D+SHWF                          P T+ +K                     VDP+  ++ P+LP GRFLHV P  P   W TS  LPWW+D K  VGK LTRKAR + VVN+L++Q   L V CE+TI DIQ RYLE N+HAASYTWK L D++FVP KM+ TLEENGI D+ L FE L +D+  Y P+LH+YFNDDLT+A
Sbjct:   15 KLRYYTPHEVAARNQAHDCWVSINHRVLDLSELIMDNRGILTQPLVLHAGEDISHWFD-------------------------PETEDIK-------------------YHVDPERNISFPFLPYGRFLHVAPLEPLGDWKTSDFLPWWKDPKYTVGK-LTRKARWIEVVNVLTQQRHSLQVCCEETIHDIQTRYLEMNSHAASYTWKYLDDDEFVPLKMNCTLEENGIPDESLMFEHLDMDEHQYKPILHLYFNDDLTVA 230          
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C328_9STRA)

HSP 1 Score: 235 bits (600), Expect = 3.880e-73
Identity = 114/261 (43.68%), Postives = 161/261 (61.69%), Query Frame = 1
Query:   49 KARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
            + R+YTP DVA HN A DC +S+F +V DLT+LI  N+GPLA PL+  AG D+SHWF                                              N  + +T++DP  G+T+PY P GRF+ VPP+ PT  WSTSFG+PWW++   +VG+ L+ K R + +VN+L++Q+D L V  E+T+ +I++RY+EYN HA SYTWK L + KFV   M +TL+ENG++D+   FE+L ID+D Y P++H+YF D+LTIA
Sbjct:   12 RRRYYTPGDVAAHNSATDCLVSIFHRVFDLTDLIRDNQGPLAQPLVEVAGQDISHWF--------------------------------------------TNNPVQCKTYIDPDRGMTLPYTPHGRFIDVPPSEPTASWSTSFGIPWWQNEDIIVGR-LSEKTRKIMIVNVLTQQKDVLEVCSEETMLEIRDRYMEYNKHAESYTWKKLHEGKFVVMNMQKTLDENGVIDESDDFEELEIDEDFYYPIIHVYFEDNLTIA 227          
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLP1_PYTOL)

HSP 1 Score: 234 bits (596), Expect = 2.370e-72
Identity = 124/265 (46.79%), Postives = 159/265 (60.00%), Query Frame = 1
Query:   37 TSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
            T +   R+YTP +VA+HN  EDCW+S+F ++LDL+ELI  +RG L  PLI  AG D+SHWF                          P+T+ V                   R  VD    + +P+LP GRFL+VPP  PT+ WST+  +PWW+D K VVGK LT K R + +VN+L++Q   L V CE+TI +IQ RYL +NAHA SYTWK L D+ FVP  M QTLEENGI D+   FEKL +D+  Y P L+IYFNDDLT+A
Sbjct:   21 TRTRALRYYTPREVAMHNTGEDCWVSIFHRILDLSELIQEHRGLLTQPLILHAGEDISHWFD-------------------------PATQDV-------------------RKHVDAGRNVELPFLPYGRFLNVPPPEPTSNWSTTDAVPWWKDAKYVVGK-LTTKVRWIEIVNVLTQQHHALEVCCEETIEEIQARYLRFNAHARSYTWKYLDDDDFVPLNMKQTLEENGIPDESPLFEKLDMDEQQYKPSLYIYFNDDLTVA 240          
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHL5_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.970e-72
Identity = 117/259 (45.17%), Postives = 157/259 (60.62%), Query Frame = 1
Query:   55 RFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 831
            R+YTP++VA HN A D W+S+F +VL+LT+L+  +RG L  PLI AAG D+SHWF                                             E  G  +T +DP  G+ +PY P GRFLHV P  PT  WST    PWW+D   V+GK LT+K R +++VN++S+Q D L V  E+TI++I++RY+EYN HA+SYTWK L    FV   M++TL ENG+VD+   FE+LGI+DD Y P+LH+YFNDDLT+A
Sbjct:   34 RYYTPEEVAAHNSAGDLWVSVFHRVLNLTDLVREHRGELTVPLIEAAGQDISHWFD--------------------------------------------EKTGNVKTRIDPGKGIRLPYTPQGRFLHVAPAEPTANWSTKIANPWWQDENLVIGK-LTQKTRKVQIVNVISQQTDLLTVCSEETISEIRDRYMEYNRHASSYTWKKLAQGTFVLLDMEKTLAENGVVDESEEFEELGIEDDFYYPILHVYFNDDLTVA 247          
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Cytochrome (b5 heme-binding domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JSH1_9STRA)

HSP 1 Score: 233 bits (593), Expect = 4.550e-72
Identity = 118/264 (44.70%), Postives = 164/264 (62.12%), Query Frame = 1
Query:   34 DTSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLT 825
            D++  + +F+TP +V++HN AEDCW+S+  +VLD++ LI  NRGPL  PLI  AG D+SHWF                          P+T+ VK                     VDP+  L++P+LP GRFLHVPP  PT +W T+  LPWWRD + +VG+ LT+K R L +VN+L++Q+  L V CE+T+A+IQ RYL  NAHA SYTWK L+D++FVP  M +TL+ENGI D+   FE+  +D+  + P LH+YF+DDLT
Sbjct:    8 DSAQRRPQFFTPREVSIHNLAEDCWVSINHRVLDVSSLIQENRGPLVQPLIHHAGEDISHWFD-------------------------PNTENVKH-------------------HVDPERNLSLPFLPYGRFLHVPPPDPTAQWRTADFLPWWRDPQYIVGR-LTKKVRWLEIVNVLTQQQHSLEVCCEETLAEIQTRYLRVNAHAGSYTWKHLEDDEFVPLYMQRTLDENGIPDESPTFERFDMDEQQFKPTLHLYFDDDLT 226          
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ39_9STRA)

HSP 1 Score: 226 bits (577), Expect = 2.780e-69
Identity = 125/291 (42.96%), Postives = 165/291 (56.70%), Query Frame = 1
Query:   49 KARFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAPSTKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDG------------------------------YMPVLHIYFNDDLTIA 831
            + R+YTP+++ALHNCAEDCW+S+FG+V DLTE I ANRGPLA P+I  +G DVSHWF      D K                   TK V                   R  +DP+T L +PYLPMGRFLHVPP FP++ W T FG PWW+D    +G  L++K R +R++N L+RQ D+L+V  E+TI +IQ+R L YNAHAASYTWK L++ KF    M +TL ENG++D+   F+ L    +G                              Y+P L +Y+NDDLT+A
Sbjct:   10 RRRYYTPEEMALHNCAEDCWVSVFGKVYDLTEFIAANRGPLAQPIILMSGKDVSHWF------DEK-------------------TKYV-------------------RMHIDPETNLRLPYLPMGRFLHVPPAFPSSAWRTDFGTPWWQDADLCIGA-LSQKTRVVRIINALTRQADELIVPTEETIDEIQDRCLSYNAHAASYTWKSLREGKFEVLDMAKTLAENGVIDELDNFKMLDPKPEGFPPEETDLTESEKRIVEEANRYDESDIHAEYIPELVLYYNDDLTVA 255          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig806.16221.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Cytochrome1.180e-19094.95b5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID... [more]
Cytochrome1.510e-14280.00b5 heme-binding domain-containing protein n=1 Tax=... [more]
Cytochrome2.580e-9054.75b5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A8... [more]
Hypothetical1.720e-7747.49protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Cytochrome7.550e-7448.66b5 heme-binding domain-containing protein n=1 Tax=... [more]
Hypothetical3.880e-7343.68protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Uncharacterized2.370e-7246.79protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Hypothetical2.970e-7245.17protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Cytochrome4.550e-7244.70b5 heme-binding domain-containing protein n=3 Tax=... [more]
Hypothetical2.780e-6942.96protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig806contigE_fasciculatus_S2_contig806:20367..24273 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score542.0
Seed ortholog evalue1.7e-151
Seed eggNOG ortholog2880.D7FS97
Preferred nameCYB5D1
Model size1072
KEGG koko:K05747,ko:K11448,ko:K11642
KEGG Pathwayko04062,ko04144,ko04520,ko04530,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,ko05231,map04062,map04144,map04520,map04530,map04666,map04810,map05100,map05130,map05131,map05132,map05231
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.heme binding
EggNOG OGsCOG5274@1,KOG0537@2759
Ec32 ortholog descriptionCytochrome b5
Ec32 orthologEc-05_004830.1
EC3.6.4.12
Cds size834
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04131,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig806.16221.1prot_E_fasciculatus_S2_contig806.16221.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig806 20367..24035 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842467.324438-CDS-E_fasciculatus_S2_contig806:20366..204921696842467.324438-CDS-E_fasciculatus_S2_contig806:20366..20492Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 20367..20492 +
1696842467.337888-CDS-E_fasciculatus_S2_contig806:20860..211621696842467.337888-CDS-E_fasciculatus_S2_contig806:20860..21162Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 20861..21162 +
1696842467.347292-CDS-E_fasciculatus_S2_contig806:21714..218081696842467.347292-CDS-E_fasciculatus_S2_contig806:21714..21808Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 21715..21808 +
1696842467.3689888-CDS-E_fasciculatus_S2_contig806:22693..227951696842467.3689888-CDS-E_fasciculatus_S2_contig806:22693..22795Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 22694..22795 +
1696842467.3867772-CDS-E_fasciculatus_S2_contig806:23232..232951696842467.3867772-CDS-E_fasciculatus_S2_contig806:23232..23295Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 23233..23295 +
1696842467.3982096-CDS-E_fasciculatus_S2_contig806:23888..240351696842467.3982096-CDS-E_fasciculatus_S2_contig806:23888..24035Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 23889..24035 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842467.4090981-UTR-E_fasciculatus_S2_contig806:24035..242731696842467.4090981-UTR-E_fasciculatus_S2_contig806:24035..24273Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig806 24036..24273 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig806.16221.1

>prot_E_fasciculatus_S2_contig806.16221.1 ID=prot_E_fasciculatus_S2_contig806.16221.1|Name=mRNA_E_fasciculatus_S2_contig806.16221.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=278bp
MTENAPTGDQDDTSSPKARFYTPDDVALHNCAEDCWLSLFGQVLDLTELI
LANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPKGISGGDKSSNKAP
STKTVKEAGDGNGRLEECENAGEPRTFVDPQTGLTMPYLPMGRFLHVPPN
FPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVAC
EDTIADIQERYLEYNAHAASYTWKVLQDEKFVPAKMDQTLEENGIVDDDL
AFEKLGIDDDGYMPVLHIYFNDDLTIA*
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mRNA from alignment at E_fasciculatus_S2_contig806:20367..24273+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig806.16221.1 ID=mRNA_E_fasciculatus_S2_contig806.16221.1|Name=mRNA_E_fasciculatus_S2_contig806.16221.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3907bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig806:20367..24273+ (Ectocarpus fasciculatus EfasUO2)
ATGACTGAGAACGCCCCAACTGGTGACCAGGACGACACCAGCTCTCCAAA GGCGCGGTTCTATACTCCGGATGATGTGGCACTACACAACTGTGCGGAGG ACTGCTGGTTGTCGCTCTTTGGGCAGGTACCTTGAATGATCACAGAGCGG AAAAGCTGCAGAATGCATACCCTCAATGCTGTGAGAAGTGCTGACGTGCT TACCAACACACCAGCGGTACGCTGATCGGTACAACATGATGGGACAGTAT AACAGTTGGATGAGCGAACAAAATTTTGCGCCATGCGCTCGCTCGCAGCC CTCGACTTCCGTGCCATTCGGTCTCGTCTTCAATAGGTAGTCTGTGCACC TAGCGACTGCACCTTATGTGGCAGGAACACGTGCGCGACTCTCCGCCTTT GCGCCCGCCTCACAAAACCGCACACGCCTCCTAATGAACCTGTGCAATGT GCCGATTAAAACTATCGTCTTGTACCCACGACGCAATACACCAGGTACTG GATTTAACGGAGCTGATACTCGCCAACAGGGGACCACTGGCGGATCCGCT AATCGCAGCCGCGGGGACTGACGTCTCCCATTGGTTCCATCTCCCGCCAC CACCTGACGTCAAGAAGTCAAAACCAAAGGGGATTAGCGGTGGTGACAAG TCAAGCAATAAGGCGCCGTCAACTAAGACAGTCAAGGAGGCTGGCGACGG CAATGGGAGGCTGGAGGAATGCGAGAACGCGGGAGAACCACGGACATTCG TCGACCCACAGACGGGGCTGACGATGCCGTATCTACCCATGGGAAGGTGG GTTGTGAGCGATGTGATCTGAGTATCACCAAACTTCGAACGCGCTGACTG ATATACAGCGAATCTGTTTGGGGGAGAACATGTGCCATCGAACGGTGCTG ACATGTGTGTGGCAAAATGGTTCGTGGCTTTCATCGACTGGTCAAGCCGT CCATCGTTTTCCGGCCACTTGCTTGTTTGGCCAGAGGGTCGCATTTAGTT GGCTATGAATTGGTATCACGGCTACAGTGAAGTTTCCCTCCCATTCAGCG ACTTTCAAAGCAAGGGTAGAGTTATTTGACACGGAAAGCATGTTCTCCAG AACATGCAGAGGAGGTCTTCGCCGACAGGCTACTGACTCCAGCACTAGGA TGTCTACACTGTGGAGAGTCTGGGGAGAGAGTGAGCCCAAGCAGGACACC GAAATATTAGACTTACTTGCCCTCGACAGCCGCAGGTTTCGTTCTTCGAA GGCGCTTTTCAGTGCATGTTGCTGCTTTCTGTTTATTTGCACTTGTGTCG AATGCGTCCGTTTCCCGTTCAAATATTTACTGCTGGTTTTTCACTCAGGT TCTTGCACGTGCCGCCAAATTTCCCCACGACCAAGTGGAGTACCAGCTTC GGCCTTCCATGGTGGCGGGATCGGAAGAGAGTAGTCGGCAAGGTGAGCGC GAGCACTTTCACTTGTGCCCTTGGTGGCTTTTGCGATAGAAGGGCTATTG CACGGACTGGCAATGAGCAAGGCGGGGCATACGAGCACCTTCACTTGTGC CCTTGGTGGCTTTTGCGATAGAAGGGCCAATGCACCGGTGCCTCGACTGG CAATGAGCTGGGTGGATAATATGAAGTATTTGGGCTGCCTACAAAGCCCG CGTTTGACCAGTAACCACTACCCGTCACGGGGAGTGGGTAAGGGGCGAGA AACGGGACATAATGTATCGAAGAAAGGGTTCCCCTCCCACCCAAACATCA CTTTTTATCCGCGTCGTCAGAGTCTCAGCCAACGGTTTTCAAAGAGACGT TCACGCAGACTTCACGCGCGGCGCGCAGACAAGATAGACGTGGTAAGGGT CGGTGGAGCCTTGGACCTATGCCGGAGCACATCCCTATAATATATTGCCC ACCACCACTTCGTGCCGTGGGTGTGCACCTCGCGTGATACTATTGCAGTA ACCCGCCAAACTCTTTTTGCTTTCCCGAAACCTACTTCCGACTGACCGCG GGGTGACCCCTTGCTACTCATTCATGCACCAAGCAAGCGATGACACAGGC GGTCGCCTCCCTTGTCCATGCGACTGCCCGTGTGATCACGCGCTCGCAGC ACAAAAAAAAGTGGTCTACTAGTTGACATCACAGTTGAGAAGTCGTGCCC AAACGTTGAAGGGCGACATGTTGCTATACCATCCGCACCCATCTCGTCGT AGAACGTGCGCTTGACTTCCTGCACCTCAATCACTTTCTCTCTTGTACAA CCAACCGTCTCTAACGCCTCCAACCCGGGTACTACTACCTGCGATTCGCT CACTGCTGTGACCCCTGCCTCATCGAGAAGCTGACCCGGAAGGCACGACC GCTGCGGGTGGTGAACATTTTGTCGAGGCAAGAAGATCAGCTCTTGGTGG CGTGCGAGGACACGATTGCGGACATTCAGGTGTGTACGAAGAGTTATCGT TGAGCAGCATCCTCCAAATTAGAAAATGCTTCCTGGGTTTGACGAGTTCA TGTTCTCGGCACCGCTCTCTCCGAACAACGGCCCTGCTGCACACACGAAA ATCTAACCAATACTCGTGGATTTGAAAGCACGCAATCGGCTGTCTACGCG TGGGCCAATCACGGTGCGCGAACCTGAGGTAATCGAGAAGCCGCGTTCAC ACAAATCTGTTATCGGCGCGCTCCCCGTTCAAGCTGTTGTTGCCAACGAT GGCGCCCGTTGCTTGCCTCTGCTTTGTGCGACCCCATTGCCAGAGGAGGA GCTCGTTCGCACAAAAACCGCGGTAGGAGGGAGAGAATGCAATATTCCAA TAACGTATTTATCTGATTGTCTGAAAACTTTGAACATCGCTTAACTCATG CATCCCGTTGGCCCAGGAGCGCTATCTCGAGTACAACGCCCACGCCGCAA GCTACACGTGGAAGGTGCTGCAGGACGAGGTATGGCCGCCGGTTCGTTTT GGCCCCATGGTTTCTGTATTCGTTGTTGTACGTTGTAACGAGCTCTCATG ATTGGGTCCCGCACACTCACCCTTTCCCTCTTTAAGCCTAGAACGCGACA ATTGGCGGCGGCGGATGGGGTTCCTTGTTTAGCTTTAGTGAACACGAAAA GACACGTAAACATAGTCACAGCATAGATCTTGTGCAGCGTGGTCAACACG GCACCCGTTTTGGACGCTGACGAGCGCATGAGACCTCGTTTTTAGCCGTG AGGGATCAAAAACATCCCTGTGTGCCCCGGTACGCGGTCCTTCTTTGATC ATCTTTGTGTTTCAGTTAGCGCCCGCAAGTAAAAAACCGGCAGCTAAAAA ACGAAGCCAAGGAAAAACTCAAAATCTATTACTTTGAGCACCATTTGGGA GATCGGGTGCGAACTTCTACATGTAAGCCCTACCGCATAGTGGCCATCCG TAAAGCAAAACGCTAGATGCCAAGAACCCCAGCCTCGACCAGTACTAGAG GTTCTTATGCATACGTGCGGCCAAAACGAGAGGTTCTTACGTGCGGACAC TGGCTCTATTATAATCCTGCAGAAGTTCGTCCCGGCGAAGATGGACCAGA CCCTGGAGGAGAACGGGATCGTGGACGATGACCTGGCCTTCGAGAAACTC GGTATAGATGACGATGGCTACATGCCGGTCCTGCACATCTACTTCAACGA CGACCTTACCATCGCATGAGAGACCCACTAGGTGTAGCCCTTCGTCAGAG TATCGCGTCGTGCGTCGTAGGTGACGATGTCGTCATCGAGCGGACGTACG TGGCGCGTCTGAAAGCCATGTTGTGGCATCAGTGGTGGCGACGGATGAAT GAGTGTTTTGTGTGCGCGTCTAGGTAGTCCACATGATATTGTCGTTTGTC ATCTAGTCTCCTCCACGTTTGCTGTTGTAGCGACACTCCAATCCAGGCAG ATAAGAC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig806:20367..24273+

>mRNA_E_fasciculatus_S2_contig806.16221.1 ID=mRNA_E_fasciculatus_S2_contig806.16221.1|Name=mRNA_E_fasciculatus_S2_contig806.16221.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=834bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig806:20367..24273+ (Ectocarpus fasciculatus EfasUO2)
ATGACTGAGAACGCCCCAACTGGTGACCAGGACGACACCAGCTCTCCAAA
GGCGCGGTTCTATACTCCGGATGATGTGGCACTACACAACTGTGCGGAGG
ACTGCTGGTTGTCGCTCTTTGGGCAGGTACTGGATTTAACGGAGCTGATA
CTCGCCAACAGGGGACCACTGGCGGATCCGCTAATCGCAGCCGCGGGGAC
TGACGTCTCCCATTGGTTCCATCTCCCGCCACCACCTGACGTCAAGAAGT
CAAAACCAAAGGGGATTAGCGGTGGTGACAAGTCAAGCAATAAGGCGCCG
TCAACTAAGACAGTCAAGGAGGCTGGCGACGGCAATGGGAGGCTGGAGGA
ATGCGAGAACGCGGGAGAACCACGGACATTCGTCGACCCACAGACGGGGC
TGACGATGCCGTATCTACCCATGGGAAGGTTCTTGCACGTGCCGCCAAAT
TTCCCCACGACCAAGTGGAGTACCAGCTTCGGCCTTCCATGGTGGCGGGA
TCGGAAGAGAGTAGTCGGCAAGAAGCTGACCCGGAAGGCACGACCGCTGC
GGGTGGTGAACATTTTGTCGAGGCAAGAAGATCAGCTCTTGGTGGCGTGC
GAGGACACGATTGCGGACATTCAGGAGCGCTATCTCGAGTACAACGCCCA
CGCCGCAAGCTACACGTGGAAGGTGCTGCAGGACGAGAAGTTCGTCCCGG
CGAAGATGGACCAGACCCTGGAGGAGAACGGGATCGTGGACGATGACCTG
GCCTTCGAGAAACTCGGTATAGATGACGATGGCTACATGCCGGTCCTGCA
CATCTACTTCAACGACGACCTTACCATCGCATGA
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