mRNA_E_fasciculatus_S2_contig8046.16209.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Match: Phosphoribosylformylglycinamidine (synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP1_ECTSI) HSP 1 Score: 279 bits (714), Expect = 8.180e-85 Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 2
Query: 2 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLKGKGRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAGEVGCGL 424
ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLKG GRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAGEVGCGL
Sbjct: 884 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLKGTGRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAGEVGCGL 1024
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7S8_9PHAE) HSP 1 Score: 247 bits (630), Expect = 2.010e-76 Identity = 128/141 (90.78%), Postives = 128/141 (90.78%), Query Frame = 2
Query: 2 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLKGKGRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAGEVGCGL 424
ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLK GRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLL S DGGLASLLLEMAFAGEVGCGL
Sbjct: 394 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLKSTGRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLGS----------DGGLASLLLEMAFAGEVGCGL 524
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Match: Phosphoribosylformylglycinamidine (synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAY9_9STRA) HSP 1 Score: 189 bits (479), Expect = 7.420e-53 Identity = 100/139 (71.94%), Postives = 109/139 (78.42%), Query Frame = 2
Query: 2 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLK-LKGKGRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAGEVG 415
ALL CGVGIDGGKDSLSMAARCG ELVKSPGTLVMTLY DIT TVTPDLK G L+Y+DLG G+AR+GG+ LAQVY Q+G PDVEDF PLVAAF TQ L+ ISAGHDRSDGGLA+ L+EMA AG VG
Sbjct: 803 ALLACGVGIDGGKDSLSMAARCGTELVKSPGTLVMTLYVCSPDITLTVTPDLKPAPGGSALLYVDLGAGRARLGGTALAQVYNQVGNESPDVEDFAPLVAAFNVTQDLIAKKLISAGHDRSDGGLATCLIEMAIAGNVG 941
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZKL3_TRICV) HSP 1 Score: 183 bits (465), Expect = 1.260e-51 Identity = 93/139 (66.91%), Postives = 111/139 (79.86%), Query Frame = 2
Query: 2 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLK----GKGRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAG 406
+LL G GIDGGKDSLSMAA+CGDE+VK+PG L +T Y TC D+TKTVTPDLK GK ++++IDLGGGKAR+GGS LAQVYGQ+G+ PD+E F L AAF ATQ L++ G I AGHDRSDGGL ++LLEMAFAG
Sbjct: 381 SLLALGCGIDGGKDSLSMAAKCGDEVVKAPGELTLTCYVTCPDVTKTVTPDLKCPASCGGKTKMLFIDLGGGKARLGGSALAQVYGQVGDDSPDMETFSTLKAAFLATQDLIEKGVILAGHDRSDGGLVTVLLEMAFAG 519
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Match: Phosphoribosylformylglycinamidine (synthase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G295_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.370e-49 Identity = 92/136 (67.65%), Postives = 107/136 (78.68%), Query Frame = 2
Query: 2 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLKGKG-RLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAG 406
+ L G GIDGGKDSLSMAARCG+ELVK+PG L +T+Y TC DITKTVTPDL+ G RL+Y+DLGGGKAR GG+ LAQVYGQ+G+ PD+EDF L F+ TQ LLD+ I AGHDRSDGG+A LLEMAFAG
Sbjct: 825 SFLALGCGIDGGKDSLSMAARCGEELVKAPGELTITMYVTCPDITKTVTPDLRCPEAGSRLLYVDLGGGKARCGGTALAQVYGQIGDACPDLEDFALLKRTFETTQELLDAQLILAGHDRSDGGIAVTLLEMAFAG 960
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFD9_9STRA) HSP 1 Score: 174 bits (440), Expect = 8.420e-49 Identity = 91/136 (66.91%), Postives = 103/136 (75.74%), Query Frame = 2
Query: 2 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLKGKG-RLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAG 406
+ L G GIDGGKDSLSMAA+CGDELVK+PG L +T Y TC DITKTVTPDLK G +L+YIDLG GKAR+GGS LAQVY Q+G PDVEDF L A TQ L+ G + AGHDRSDGGLA+ LLEMAF+G
Sbjct: 396 SFLALGCGIDGGKDSLSMAAQCGDELVKAPGELTLTCYVTCPDITKTVTPDLKCPASGSKLLYIDLGNGKARMGGSSLAQVYNQIGNESPDVEDFAGLKNALLVTQELIGQGILLAGHDRSDGGLATALLEMAFSG 531
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Match: Phosphoribosylformylglycinamidine (synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE77_THAPS) HSP 1 Score: 176 bits (446), Expect = 2.060e-48 Identity = 90/137 (65.69%), Postives = 106/137 (77.37%), Query Frame = 2
Query: 2 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLKG--KGRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAG 406
+LL G GIDGGKDSLSMAA+CGDE+VK+PG L MT Y TC DITKTVTPDLK G K L+++DLGGGKAR+GGS LAQ Y Q+G PD+EDF L F Q L+++G I AGHDRSDGGLA++L+EMAFAG
Sbjct: 784 SLLALGCGIDGGKDSLSMAAQCGDEVVKAPGELTMTCYVTCPDITKTVTPDLKCPGGSKTTLLFVDLGGGKARMGGSSLAQTYNQIGNESPDIEDFGVLKNTFLVVQDLIEAGTILAGHDRSDGGLATVLMEMAFAG 920
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RMA3_9STRA) HSP 1 Score: 170 bits (431), Expect = 3.860e-48 Identity = 87/136 (63.97%), Postives = 102/136 (75.00%), Query Frame = 2
Query: 2 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLKG-KGRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAG 406
+LL G GIDGGKDSLSMAA+CGDE+VK+PG L +T Y TC D+TKTVTPDLK G +L +I LGG AR+GGS LAQVYGQ+G PD+E+F PL F TQ L+ G + AGHDRSDGGLA L+EMAFAG
Sbjct: 107 SLLALGAGIDGGKDSLSMAAKCGDEVVKAPGELTLTCYVTCPDVTKTVTPDLKCTGGTSKLFFIHLGGDNARLGGSALAQVYGQIGNESPDMENFTPLKQCFITTQKLISEGKLLAGHDRSDGGLAVTLMEMAFAG 242
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0P5_9STRA) HSP 1 Score: 173 bits (439), Expect = 5.110e-48 Identity = 87/134 (64.93%), Postives = 103/134 (76.87%), Query Frame = 2
Query: 8 LDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLKG-KGRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAG 406
L+ G+GIDGGKDSLSMAA+CGDE+VK+PG L MT Y TC DITKTVTPDLK G K +L+++DLGGG R+GGS LAQVY Q+G PD+ DFK + AF TQ L+ I+AGHDRSDGGL L+EMAFAG
Sbjct: 178 LELGIGIDGGKDSLSMAAKCGDEVVKAPGELTMTCYVTCPDITKTVTPDLKCHGSKSKLLFVDLGGGNTRLGGSSLAQVYNQIGNDSPDIADFKLVKNAFNVTQDLIGKRMIAAGHDRSDGGLIVTLMEMAFAG 311
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Match: Phosphoribosylformylglycinamidine (synthase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RWG2_THAOC) HSP 1 Score: 174 bits (441), Expect = 9.700e-48 Identity = 89/139 (64.03%), Postives = 104/139 (74.82%), Query Frame = 2
Query: 2 ALLDCGVGIDGGKDSLSMAARCGDELVKSPGTLVMTLYCTCDDITKTVTPDLKLK----GKGRLVYIDLGGGKARVGGSCLAQVYGQLGETPPDVEDFKPLVAAFKATQGLLDSGAISAGHDRSDGGLASLLLEMAFAG 406
+LL G GIDGGKDSLSMAA+CGDE+VK+PG L +T Y TC D+ KTVTPDLK GK L+++DLG GKAR GGS LAQVYGQ+G PDVEDF PL F A Q L++ G + +GHDRSDGGL + LLEMAFAG
Sbjct: 787 SLLALGAGIDGGKDSLSMAAQCGDEVVKAPGELTLTCYVTCPDVRKTVTPDLKCPRRCGGKTALLFVDLGCGKARCGGSSLAQVYGQIGNESPDVEDFGPLKGTFLAVQDLIEKGTVLSGHDRSDGGLVTTLLEMAFAG 925 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8046.16209.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8046.16209.1 >prot_E_fasciculatus_S2_contig8046.16209.1 ID=prot_E_fasciculatus_S2_contig8046.16209.1|Name=mRNA_E_fasciculatus_S2_contig8046.16209.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=142bp GAARLRRRHRRREGLAVHGRQVRGRARQVAGDSGHDAVLHVRRHHQDRHAback to top mRNA from alignment at E_fasciculatus_S2_contig8046:2897..5066+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8046.16209.1 ID=mRNA_E_fasciculatus_S2_contig8046.16209.1|Name=mRNA_E_fasciculatus_S2_contig8046.16209.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2170bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8046:2897..5066+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8046:2897..5066+ >mRNA_E_fasciculatus_S2_contig8046.16209.1 ID=mRNA_E_fasciculatus_S2_contig8046.16209.1|Name=mRNA_E_fasciculatus_S2_contig8046.16209.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=426bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8046:2897..5066+ (Ectocarpus fasciculatus EfasUO2)back to top |