mRNA_E_fasciculatus_S2_contig8041.16205.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8041.16205.1
Unique NamemRNA_E_fasciculatus_S2_contig8041.16205.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 480 bits (1236), Expect = 1.100e-164
Identity = 227/248 (91.53%), Postives = 240/248 (96.77%), Query Frame = 1
Query:    1 MARTGFVALACGMLGAANALKVVTPSEGLTVIAERTYTVEWTGTSSNNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSGDLASTCGEYTVEFDYDNGVGSSVDRFSIDLYRADGDGDCGTYVESICDKPTIGCKDSTGDYDVEIPCGTEPGEYKIRVARFEDDSLYSCSDAFTIEDG 744
            M RTGFVALACGMLGAANALKV TPS+GLTVIA+RTYTVEWTGTSS+NRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEF+LLAS+EAPSVGD DGP+LEVTSP+SGDLA+TCGEYTVEFDYDNGVGSSVDRF+IDLYRADG+GDCGTYV+SICDKPTIGCKDS GDYDVEIPC T+ GEYKIRVARFEDDSLYSCS  FTIE+G
Sbjct:    1 MTRTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTIEEG 248          
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Match: Imm (downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI)

HSP 1 Score: 411 bits (1057), Expect = 5.260e-138
Identity = 198/235 (84.26%), Postives = 214/235 (91.06%), Query Frame = 1
Query:    1 MARTGFVALACGMLGAANALKVVTPSEGLTVIAERTYTVEWTGTSSNNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSGDLASTCGEYTVEFDYDNGVGSSVDRFSIDLYRADGDGDCGTYVESICDKPTIGCKDST----GDYDVEIPCGTEPGEYKIRVARF 693
            MARTGFVALACGMLGAANALKV TPS+GLTVIA+RTYTVEWTGTSS+NRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPM GTSGSGYKVRVWDIHDEEDADCSDEF+L+AS+EAPSVGD DGP+LEVTSP+SGDLA+TCGEYTVEFDYDNGVGS VDRF+IDLYRADGDGDCGTYV+SICDKPTIGCKDS     G + V+   G   G + + V R+
Sbjct:    2 MARTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCKDSNPVRRGRWRVQDSGGPLRGRFSLLVLRY 236          
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Match: EsV-1-163 (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 9.310e-129
Identity = 191/253 (75.49%), Postives = 206/253 (81.42%), Query Frame = 1
Query:    1 MARTGFVALACGMLGAANALKVVTPSEGLTVIAERTYTVEWTGTSSNNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSGDLASTCGEYTVEFDYDNGVGSSVDRFSIDLYRADGDGDCGTYVESICDKPTIGCKDSTGDYDVEIPCGTEPGEYKIRVARFEDDSLYSCSDAFTIEDGGNDSS 759
            MARTGFVALAC MLGAANAL+VVTPS  L V+A+RTYTVEWTG  S  RFEIDLY+CGSMCMED CGDWVTALCPYGE+GCPDNEGDYDIVMPEPM G S SGYKVRV D+ DE+  DCSD F+L+AS +AP  G   G  L VTSP+ GD A    EYTVEFDYDNGVGS VDRFSIDLY ADGDGDCGTYV SICDKP+IGCKDS GDYDVEIP  TE G+YKIRV RFED+ LY CS  FTI  GG+D S
Sbjct:    1 MARTGFVALACAMLGAANALEVVTPSADLIVVADRTYTVEWTGADSG-RFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIM-GGDDES 251          
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 375 bits (963), Expect = 1.310e-123
Identity = 181/253 (71.54%), Postives = 207/253 (81.82%), Query Frame = 1
Query:    1 MARTGFVALACGMLGAANALKVVTPSEGLTVIAERTYTVEWTGTSSNNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSGDLASTCGEYTVEFDYDNGVGSSVDRFSIDLYRADGDGDCGTYVESICDKPTIGCKDSTGDYDVEIPCGTEPGEYKIRVARFEDDSLYSCSDAFTIEDGGNDSS 759
            M RTGFVALACGMLG A+AL+VVTP+ G  V++ R YTVEW+GT SN RFEIDLYYC SMCMED+CG+WVTALCPYGEDGCPDNEGDYDIVMPEPM GTSGSGYKVRV D+ DE+ +DCSDEF+L+A  +APS  D+ GP + VTSPS+GD A    EYTVEFDYDNG+GSSV RF+IDLY A G GDCGT++ ++CDKPTIGCKDS GDYDVEIP   E G Y IRV  FED+S+Y CSD F I  G +DSS
Sbjct:    2 MVRTGFVALACGMLGVASALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEIL-GADDSS 253          
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Match: EsV-1-163 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 6.090e-121
Identity = 198/275 (72.00%), Postives = 220/275 (80.00%), Query Frame = 1
Query:   37 MLGAANALKVVTPSEGLTVIAERTYTVEWTGTSSNNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSGDLASTCGEYTVEFDYDNGVGSSVDRFSIDLYRADGDGDCGTYVESICDKPTIGCKDSTGDYDVEIPCGTEPGEYKIRVARFEDDSLYSCSDAFTI---EDGGNDSSXXXXXXXXXXXXXXXXXXXXXXEDFSMSYRF 852
            MLGAA+AL+VVTP+EG  V+A R YTVEWTGT SNNR+EIDLYYCGSMCMED+CGDWVTALCPYGEDGCPDNEGDYDIVMPEPM GTSGSGYKVRV D+ D++  DCSDEF+L+A  EAPS GD+ GP + VTSPSSGD A    EYTVEFDYDNG+GSSV RF+IDLY A G GDCGT++ ++CDKPTIGCKDS GDYDVEIP   E G Y IRV  FEDDS+Y CSD F I   +D  +D         XXXXXXXXXXXXXXX   SMSYRF
Sbjct:    1 MLGAASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILGADDSPDDGDLDMESEDXXXXXXXXXXXXXXXXXXSMSYRF 275          
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Match: Imm (upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 5.020e-110
Identity = 170/248 (68.55%), Postives = 194/248 (78.23%), Query Frame = 1
Query:    1 MARTGFVALACGMLGAANALKVVTPSEGLTVIAERTYTVEWTGTSSNNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSGDLASTCGEYTVEFDYDNGVGSSVDRFSIDLYRADGDGDCGTYVESICDKPTIGCKDSTGDYDVEIPCGTEPGEYKIRVARFEDDSLYSCSDAFTIEDG 744
            MART F ALA GMLGAANAL+VV+P+ G  V+A+  YTVEWTG +S  R++IDLYYCGS+CMED+CGDWVTALCPYG+DGCPD +GDYD+VMPEPM GTS SGYKV V D  DE D  CS +F L+AS EAP   D  G  + VTSPS GD A   GEYTVEFDYDNG+GSSV+RF+IDLY + G GDCGTYV +ICDKP+IGCKDS GDYDV IP GTE G Y IRV  FEDD +Y CSD+F I  G
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGDMVVADSAYTVEWTGATSG-RYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDM-GAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVGG 245          
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Match: EsV-1-163 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 2.130e-106
Identity = 168/254 (66.14%), Postives = 196/254 (77.17%), Query Frame = 1
Query:    1 MARTGFVALACGMLGAANALKVVTPSEGLTVIAERTYTVEWTGTSSNNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSGDLASTCGEYTVEFDYDNGVGSSVDRFSIDLYR-ADGDGDCGTYVESICDKPTIGCKDSTGDYDVEIPCGTEPGEYKIRVARFEDDSLYSCSDAFTIEDGGNDSS 759
            MART F ALA GMLGAANAL+VV+P+ G++VIA+RTYTVEWTGTS ++RFEIDLYYCGS CMED+CGDWVTALCPYG DGCPD +GDYDIVMPEPM GTS SGYKV V D +DE    CS +F L+AS +AP+ G+  G SL VTSPS GD A   G YTVE+DY+NG+GSS DRF+IDLY    G GDCGTYV ++CDKP+IGC DS GDYDVEIP  T  G Y +RV  F DD ++ CS+ F I +   D S
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGISVIADRTYTVEWTGTS-DSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTS-SGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEV-GYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIVNDRTDMS 251          
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Match: GPI-anchored (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 6.610e-102
Identity = 157/246 (63.82%), Postives = 187/246 (76.02%), Query Frame = 1
Query:    1 MARTGFVALACGMLGAANALKVVTPSEGLTVIAERTYTVEWTGTSSNNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSGDLASTCGEYTVEFDYDNGVGSSVDRFSIDLYRADGDGDCGTYVESICDKPTIGCKDSTGDYDVEIPCGTEPGEYKIRVARFEDDSLYSCSDAFTIE 738
            MART F A+A GML AANAL+VV+P  G++V+A+R YTVEWTGT++  RFEIDLYYC S CM+D CGDWVTALCPYG DGCPD+ GDYDI+MPEPM GTS SGYKV V +  DE D  CSD+F L+AS +AP  G+  G SL VTSPS GD A     YTVE+DY+NG GSS DRF++DLY   G GDCGTYV ++CD+P+IGC DS GDYDVEIP  T  G Y IRV  F+D+ +Y CSD F ++
Sbjct:    1 MARTAFAAVAFGMLSAANALEVVSPDGGISVLADRAYTVEWTGTTTG-RFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEM-GYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEVD 243          
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 1.480e-86
Identity = 149/253 (58.89%), Postives = 170/253 (67.19%), Query Frame = 1
Query:    1 MARTGFVALACGMLGAANALKVVTPSEGLTVIAERTYTVEWTGTSSNNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSGDLASTCGEYTVEFDYDNGVGSSVDRFSIDLYRADGDGDCGTYVESICDKPTIGCKDSTGDYDVEIPCGTEPGEYKIRVARFEDDSLYSCSDAFTIEDGGNDSS 759
            MART F ALA GMLGA NAL+V +P+ G  ++A  + TVEWTGTSS  RF+IDLYYCGS+CMED+CGDWVTALCPYG+DGCPD +GDYD+VMPEPM GTS SGYKV V D  DE D  CS EF L+AS                                  FD+DNG GSSV+RFSIDLY + G GDCGTYV SICDK +IGCKDS GDYDV IP  TE G Y IRV  FED  ++ CSD+F I  G +  S
Sbjct:    1 MARTAFAALAFGMLGAVNALEVTSPAAGDMIVAASSTTVEWTGTSSG-RFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDMGCSGEFTLVASAXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXFDHDNGFGSSVNRFSIDLYMSGGSGDCGTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFEDPDVFGCSDSFEIIGGESSMS 250          
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ8_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 2.010e-81
Identity = 132/184 (71.74%), Postives = 145/184 (78.80%), Query Frame = 1
Query:  184 MEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSGDLASTCGEYTVEFDYDNGVGSSVDRFSIDLYRADGDGDCGTYVESICDKPTIGCKDSTGDYDVEIPCGTEPGEYKIRVARFEDDSLYSCSDAFTI 735
            +ED+CG+WVTALCPYG +GCPDNEGDYDIVMPEPM GTSGSGYKVRV D+   +DADCSDEF+L+AS EAP VG  D P L VTSPS+GD A   GEYTVEFDYDNGVGS VDRF IDLY   G GDCGT+V ++CDK  IGCKDS GDYDVEIP     G Y IRV RFEDD+LY CS  F I
Sbjct:   12 VEDECGEWVTALCPYGSEGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDGPQDADCSDEFYLMASAEAPVVGGPDAPYLMVTSPSAGDKAQAGGEYTVEFDYDNGVGSRVDRFKIDLYSIGGTGDCGTWVMNLCDKEAIGCKDSMGDYDVEIPETVVDGMYSIRVGRFEDDALYGCSGEFEI 195          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8041.16205.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
Uncharacterized1.100e-16491.53protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Imm5.260e-13884.26downregulated 8 n=1 Tax=Ectocarpus siliculosus Tax... [more]
EsV-1-1639.310e-12975.49n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI[more]
Uncharacterized1.310e-12371.54protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
EsV-1-1636.090e-12172.00n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
Imm5.020e-11068.55upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
EsV-1-1632.130e-10666.14n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
GPI-anchored6.610e-10263.82domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Uncharacterized1.480e-8658.89protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.010e-8171.74protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8041contigE_fasciculatus_S2_contig8041:1751..5914 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start1
Model size1912
Hectar predicted targeting categorysignal peptide
Exons5
Ec32 ortholog descriptionSecreted protein similar to EsV-1-163
Ec32 orthologEc-26_003200.1
Cds size855
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8041.16205.1prot_E_fasciculatus_S2_contig8041.16205.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8041 2808..5914 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842465.804109-UTR-E_fasciculatus_S2_contig8041:1750..28071696842465.804109-UTR-E_fasciculatus_S2_contig8041:1750..2807Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8041 1751..2807 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842465.8166168-CDS-E_fasciculatus_S2_contig8041:2807..30401696842465.8166168-CDS-E_fasciculatus_S2_contig8041:2807..3040Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8041 2808..3040 -
1696842465.8277419-CDS-E_fasciculatus_S2_contig8041:3445..35811696842465.8277419-CDS-E_fasciculatus_S2_contig8041:3445..3581Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8041 3446..3581 -
1696842465.838983-CDS-E_fasciculatus_S2_contig8041:4153..44501696842465.838983-CDS-E_fasciculatus_S2_contig8041:4153..4450Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8041 4154..4450 -
1696842465.850079-CDS-E_fasciculatus_S2_contig8041:5187..52721696842465.850079-CDS-E_fasciculatus_S2_contig8041:5187..5272Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8041 5188..5272 -
1696842465.8632452-CDS-E_fasciculatus_S2_contig8041:5810..59141696842465.8632452-CDS-E_fasciculatus_S2_contig8041:5810..5914Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8041 5811..5914 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8041.16205.1

>prot_E_fasciculatus_S2_contig8041.16205.1 ID=prot_E_fasciculatus_S2_contig8041.16205.1|Name=mRNA_E_fasciculatus_S2_contig8041.16205.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=285bp
MARTGFVALACGMLGAANALKVVTPSEGLTVIAERTYTVEWTGTSSNNRF
EIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTS
GSGYKVRVWDIHDEEDADCSDEFFLLASNEAPSVGDSDGPSLEVTSPSSG
DLASTCGEYTVEFDYDNGVGSSVDRFSIDLYRADGDGDCGTYVESICDKP
TIGCKDSTGDYDVEIPCGTEPGEYKIRVARFEDDSLYSCSDAFTIEDGGN
DSSDDSGDASLDDSSDDSGDDSSDDEDFSMSYRF*
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mRNA from alignment at E_fasciculatus_S2_contig8041:1751..5914-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8041.16205.1 ID=mRNA_E_fasciculatus_S2_contig8041.16205.1|Name=mRNA_E_fasciculatus_S2_contig8041.16205.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4164bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8041:1751..5914- (Ectocarpus fasciculatus EfasUO2)
ATGGCTCGCACTGGGTTCGTTGCTCTGGCCTGCGGCATGCTTGGCGCCGC CAACGCCCTCAAGGTGGTGACGCCTTCGGAAGGTCTCACCGTCATCGCGG AACGGTGAGAGAAGAGAGCATAGTCTAGCTCGTCCCCTCTGCCCAGGGCA GGCGACCACTGCTGCAGCAGCGCTATTGTCCACAGAGTCATCGGTCGACC GACCCATCGGAGCAAGCCACCGTGATTTTATCAAGGGTTGATTGTTTTGG AGGATCTGTCTGGTGGCGGTTGAGTCCTGCACTCAGGGCGGATCTATGGT ATGCTGCATGATGTAGTCGTACGGCGGTGCGTCGTCGCCTCTTTCGTCAA CATTCCACGACCAGATGCTTGATGGGGGCGCCTGTAGCCACCGACCGGGG TACGTAAAACCTTTTTGATGCTCTCTTCTCTCTTGCTAGAGATGAGCAGC TGCTCTGGTCATGATCCGATCAAATGGTTCTGAAAAATGATACACTTAAG CGTAGACTCATATTTGGCGAGTAGTTTGGTGGCGGTTTAGACTATGTTCT TCCTTCAATCAGCAGCGGTACCTTGTGAGCGGACTTGAGTTGTAGTAGTC GCCACACTGACCTTGTCTTGCTGCACGCGATTTGTATCACAGGACCTACA CCGTGGAGTGGACCGGCACCAGCTCGAACAACCGTTTCGAGATCGACCTC TACTACTGCGGCTCGATGTGCATGGAGGTGAGCAAGGTTAGGTCGGAGGA TAGAGGTGACACCCCGGATCTTTTTTTGTTCCGTGTTTCGGGGCCTGTTG CCTGCCGTTGTCCGCCGCGGGTCACGGTGAATTAAGATCGGTGTACTACT GCTGTAACGTCTCGATAATTATCTACATATCCCACCAAAGCATGCATGTG CGGCACGCGTCGACGTACTGCCTGCGGTAATTGTCTTTTCACAATTATCA TGTTCAGGTTGATTGTCCACACATTGATTGCCACTCGAACCCACTCGAAG CACCAGTCTTCAGTGAGAGGGTGAGGAGAAATCGGAACTCTCGACTACTG CTCTGCTGTGTACAGCAGTTTGCCTCATACAGAAAGCCGTTTTCTTTTCA TTCTTTCACATGCATGCTCCCTTGCGTGTGCGGACTAGCAAACCGCGGTC GTGGCCCCACCGTGATGACCATCGGTGATACTCTACTTGCTGGCGCCTTT TTCATCACATGCGGTATACTCTGCTGTACAAGGAAGTCGCGGCAGCAGTT TTCCCCGGTCCCGCTCCAGCTGACAGCTGCTGCTGCTGCTATTCCAAAAA CAACACACACACACACTTTTCGAAGTTAGTCTCAAACAAACTCGAAGACG AATCTTAATCTTCCATACCCGTTAGGACGAGCGAGCGCTCTCATCCCCCC CCCGCCAACCATTTTGTCCTCTGATCCCTCCCCCGCGGCGATTTGCTTTC TAAACAAAAATCAGGACGACTGCGGTGACTGGGTGACGGCCTTGTGCCCG TACGGCGAGGACGGCTGCCCGGACAACGAGGGCGACTACGACATCGTCAT GCCCGAGCCCATGCTCGGCACGTCCGGCTCGGGCTACAAGGTGCGCGTGT GGGACATCCATGACGAGGAGGACGCGGACTGCTCGGACGAGTTCTTCCTG CTGGCGTCGAACGAGGCCCCCTCTGTCGGGGACTCGGATGGCCCGAGCCT GGAGGTCACCTCGCCTTCCTCGGGCGACCTGGCCTCGACGTGCGGGGAGT ACACCGTCGAGGTGAGAGAAGGAACGCAAGGCCTTGTGTCCGTCGATTGA GGGTTGAATTTATTCATTGTATTAGTCACAAGATGCCACCACGCTGATTT GTCGGACCTCTAGCCTTGTCAGAGCAGTAGGCTTCGCAGTAAAGGATTTT CACGTAGCATCACGATGTCATAAAATGTGCCTGTGCGGGAGGCTCGCTGG GTCACAAGTCCATAGTGTGAAAATATAAATTCAAACACAAATACAAATGA CGGCTTATCACGGCCTCTCAGAAACGCCCGAGAAATTTTACGAAGAGTTT AGACAACCCAGGAGTGTTTACCTTTGGTGTGCCGTCTGACATTGAACAAA TCAATTATATAAAATTCAACATTTCATGAAAATAATATATGCAACAATCT ATTTATCGAACACAACGTTCTGGGTGTGCCTAGCGCGTTTTCTCTGCAGT GGGTCCACCCACCATCGTTCGTTCGTTCGTTCGTTTGAATATCTCTCCTG TTTTTCAAGTCGAAAACTAAACTTGTCCCGTCGGGCAATCTCCAATCCAA AATTTCCCTATATTCGCATTGAAATGGCGGCAGTTCGACTACGACAACGG GGTGGGATCGAGCGTGGACCGGTTCTCGATCGACCTCTACCGTGCTGACG GAGACGGCGACTGCGGGACGTACGTGGAATCCATCTGCGACAAGCCTACC ATCGGCTGCAAGGACTCGAGTGAGTTGGGGTCGGTAGAGGCGCGCGTCGT GTCTTATGTTCCATGTTGGTTCATCATGCGGCACGGCAGCGTAAAGATCC GGTAGTGCTAGTAGCGGTGTCTACGTGTCATCGCTCGATCACAAACGGAA CATGGAAATGGAACATGAGGTGGGCATTATTTCTCAAGCTCCCCCCCTCT CTCAACCTGCGAGACACAATCACTCGCCCAGTATAGAAGGCACCTCGGCA GTGTTGGGTATTCTACGTTACGAATGGTTTCTCTTGATGCGCCTCTGACT TGAGGCTGTCTCTCGGTCGGTTGATCCTAGAATCCATGATACTGCTGTTG TACAATACGCGGGAGGCATCTTCTTACTTGGAGCTTCCTGTTGTGTCCCC CTTTCTTCCTCGCGATTTACGTAGCCGGCGACTACGACGTCGAGATCCCG TGCGGCACGGAGCCTGGAGAGTACAAGATCCGGGTGGCTCGCTTCGAGGA CGACTCTCTCTACTCGTGCTCCGACGCCTTCACGATCGAGGACGGCGGCA ACGACAGCAGTGATGACAGCGGTGACGCCAGCCTCGACGACAGCAGCGAT GACAGCGGTGACGACAGCAGCGACGACGAAGACTTCAGCATGTCTTACAG GTTTTAGATTCGGCAAGCTTCATCTCTGACGAGGGACCGTAGTTTCGGAT TCTTTTTTCCACGACGGTTCCGTGGTCGGTCGTGTTCGTCGGCGTTGCTC GTGTTGTGGAGTTGATTGCGGGAACAGCAGGTGATATGTGGGTGTGCAGG GAGAGAAACACAATACGGCTTTTTGGCACGGAACTGGGAGGAGATGCCGA AATCGTGTCGTTTTGTGGTGTCGACTGGTAATTGTTTTCGATGTATTCCG TAGTATAGTTCGGCGGGGCGGGTTTTGCCGGTATAGTGTACGGATCAACC TGAGCGCTGCGTGCTCAGCTCTTTTGTCTGTTTCTTTGCTTAGCAGCGGC GTTACACAAATCATGCGGAGCAACGCTTTTCCAATCGCCTTGGCGATGAT GTTCAATCCTGTTTTAATTTAGCTGCTGGCAGCGCTCGTGAGTGCTGTCT TGTTTGGAGAACAGGTTGTTGATTGTGCGCTTTGTCTTGATGCGGCGTTG TTTTATTGTCATCGCGTGTTTCGCAACAATTTTTGGCGGGGAGGAACTCG TGATGGGAGCCCCCTCCCATTCCTACGAGGAATATTTCCGAATTTCTTTC GTTACGACACCCATCTCATGCTGTACAAATAGTTCGTCGGTGTACTGTAC GTGGTTGAGGACCGTGCGTCCGCGGTGTTTGTAGAGGTTGTGGATAGCAA TTGCGTTCCATGTTATTCGTTGTGGTTCATTCGTTGTACCGTTAGTTGGC GCAGCTTGCCTTGCCGCCACCGACATTGTTGTTGTCCGTTGTATGCGTAC TAGAGCATCAGCAAAATGATACTTTGATCAAAGCGACCTCTCTTTATTGT TTTACCTTGTTTCTACACCGGCCTGGTGTTTTCCAGTTAGTTGTCTACCA CCTCAGCGAGACCTCCCTGGTTTCCTTGCCGGGTTACCCCTCCACCGAGA GATTAACTATGGGGGGAAGGGAATGACCAGCGAATATCATCGACACAGGA TCAACCAAGCGTTGTACCCTGGGAACAACACAAACCTACATTAAAGTCGT GAGCATCAGCCGGT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8041:1751..5914-

>mRNA_E_fasciculatus_S2_contig8041.16205.1 ID=mRNA_E_fasciculatus_S2_contig8041.16205.1|Name=mRNA_E_fasciculatus_S2_contig8041.16205.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=855bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8041:1751..5914- (Ectocarpus fasciculatus EfasUO2)
ATGGCTCGCACTGGGTTCGTTGCTCTGGCCTGCGGCATGCTTGGCGCCGC
CAACGCCCTCAAGGTGGTGACGCCTTCGGAAGGTCTCACCGTCATCGCGG
AACGGACCTACACCGTGGAGTGGACCGGCACCAGCTCGAACAACCGTTTC
GAGATCGACCTCTACTACTGCGGCTCGATGTGCATGGAGGACGACTGCGG
TGACTGGGTGACGGCCTTGTGCCCGTACGGCGAGGACGGCTGCCCGGACA
ACGAGGGCGACTACGACATCGTCATGCCCGAGCCCATGCTCGGCACGTCC
GGCTCGGGCTACAAGGTGCGCGTGTGGGACATCCATGACGAGGAGGACGC
GGACTGCTCGGACGAGTTCTTCCTGCTGGCGTCGAACGAGGCCCCCTCTG
TCGGGGACTCGGATGGCCCGAGCCTGGAGGTCACCTCGCCTTCCTCGGGC
GACCTGGCCTCGACGTGCGGGGAGTACACCGTCGAGTTCGACTACGACAA
CGGGGTGGGATCGAGCGTGGACCGGTTCTCGATCGACCTCTACCGTGCTG
ACGGAGACGGCGACTGCGGGACGTACGTGGAATCCATCTGCGACAAGCCT
ACCATCGGCTGCAAGGACTCGACCGGCGACTACGACGTCGAGATCCCGTG
CGGCACGGAGCCTGGAGAGTACAAGATCCGGGTGGCTCGCTTCGAGGACG
ACTCTCTCTACTCGTGCTCCGACGCCTTCACGATCGAGGACGGCGGCAAC
GACAGCAGTGATGACAGCGGTGACGCCAGCCTCGACGACAGCAGCGATGA
CAGCGGTGACGACAGCAGCGACGACGAAGACTTCAGCATGTCTTACAGGT
TTTAG
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