mRNA_E_fasciculatus_S2_contig8011.16181.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV46_ECTSI) HSP 1 Score: 372 bits (955), Expect = 1.500e-126 Identity = 198/219 (90.41%), Postives = 202/219 (92.24%), Query Frame = 1
Query: 25 LLAGLCLSVLSLGVLTRTGDDNVFLSFGVGGGAEKENTGATARRWLRGEGWGDHSAGRDQGSILSRAFRRLATARAPPGHPYFTDDEXXXXXXXXXXXXXXXXXXXXGHFWHKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKV 681
+LAGLCL VLSL VL RTGDDNVF+SFGVGG AEKE+TGATARRWLRGEGWG SAGRDQGS+LSRAFRRLATARAPPGHPYFTDDE XXXXXXXXX GHFWHKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKV
Sbjct: 1 MLAGLCLLVLSLVVLARTGDDNVFVSFGVGG-AEKESTGATARRWLRGEGWGGDSAGRDQGSVLSRAFRRLATARAPPGHPYFTDDEQAVIFEAXXXXXXXXXHNHHGHFWHKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKV 218
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ9_9PHAE) HSP 1 Score: 358 bits (919), Expect = 5.890e-119 Identity = 194/214 (90.65%), Postives = 199/214 (92.99%), Query Frame = 1
Query: 1 MSRYARPALLAGLCLSVLSLGVLTRTGDDNVFLSFGVGGGAEKENTGATARRWLRGEGWGDHSAGRDQGSILSRAFRRLATARAPPGHPYFTDDEXXXXXXXXXXXXXXXXXXXXGHFWHKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLT 642
MSRY RPALLAGLCLSVLSL V TRTGDDN+FLSFGVGG AEKENTGATARRWLRGEGWGDHSAG+ Q S+LSRAFRRLATARAPPG PYFTDDE XXXXXXXXXXXXXGH+WHKPLHPIDGWDVT VGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLN+SKRHPAADRPLVDWDLILVMEPLT
Sbjct: 1 MSRYRRPALLAGLCLSVLSLVVRTRTGDDNIFLSFGVGG-AEKENTGATARRWLRGEGWGDHSAGKGQESVLSRAFRRLATARAPPGQPYFTDDEQAVIFEAXXXXXXXXXXXXXGHYWHKPLHPIDGWDVTAVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNISKRHPAADRPLVDWDLILVMEPLT 213
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCS1_9STRA) HSP 1 Score: 172 bits (435), Expect = 8.990e-50 Identity = 88/112 (78.57%), Postives = 93/112 (83.04%), Query Frame = 1
Query: 358 HKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKVSLWW 693
HK L P+ DV G+ LA IGLMIAA GGIGGGGILVPLYILVL F PK AIPLSNITIFGGAITNT+LN KRHP ADRPLVDWDLILVMEPLTI GALVGSF+NK+ W
Sbjct: 52 HKDLFPLSARDVIGMLLAIIGLMIAAGGGIGGGGILVPLYILVLDFHPKFAIPLSNITIFGGAITNTILNSPKRHPLADRPLVDWDLILVMEPLTIAGALVGSFLNKILPEW 163
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS5_9STRA) HSP 1 Score: 177 bits (450), Expect = 4.550e-49 Identity = 87/112 (77.68%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 346 GHFWHKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKV 681
G HK L P+D WD G+ A IGLMIAA GGIGGGGILVP+++L++ F PK+AIPLSNITIFGGAITN LNLSKRHP ADRPLVDWDLILVMEPLTIGGALVGSFINKV
Sbjct: 62 GQSHHKKLLPLDAWDKAGIFAAIIGLMIAAGGGIGGGGILVPIFVLIMRFHPKYAIPLSNITIFGGAITNVALNLSKRHPLADRPLVDWDLILVMEPLTIGGALVGSFINKV 173
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T5B1_HETAK) HSP 1 Score: 177 bits (450), Expect = 5.790e-49 Identity = 86/108 (79.63%), Postives = 95/108 (87.96%), Query Frame = 1
Query: 358 HKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKV 681
HK L P+DG D GV L+ IGLMIAA GGIGGGGILVPLYILVLGF PK+AIPLSNITIFGGAITNT+LN+ KRHP ADRPLVDWDLI++MEPLTI GA+ GSF+NKV
Sbjct: 88 HKDLLPLDGTDFLGVFLSSIGLMIAAGGGIGGGGILVPLYILVLGFSPKYAIPLSNITIFGGAITNTILNIPKRHPVADRPLVDWDLIMIMEPLTIAGAIAGSFVNKV 195
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ6_ECTSI) HSP 1 Score: 166 bits (419), Expect = 2.230e-47 Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 1
Query: 385 WDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKV 681
WDV V LA GLMIAAAGGIGGGGILVP++ILVL F PK+A+PLSNITIFGGAITNT LN+ KRHP ADRPLVDWDLILVMEPLTIGGALVGSFI KV
Sbjct: 12 WDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKV 110
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UW20_9STRA) HSP 1 Score: 172 bits (437), Expect = 4.400e-47 Identity = 79/108 (73.15%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 358 HKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKV 681
HKPLHP+D D G G A +GLM+AA GGIGGGGILVP YILV+GF PKHAIPLSN+T+ GGAI N++LN KRHP ADRPL+DWDLILVMEPLTI GAL+G+F+NK+
Sbjct: 83 HKPLHPLDSTDYIGFGCAILGLMVAAGGGIGGGGILVPTYILVMGFSPKHAIPLSNVTVLGGAIANSLLNSRKRHPLADRPLIDWDLILVMEPLTIAGALIGAFLNKL 190
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y290_HETAK) HSP 1 Score: 167 bits (422), Expect = 4.590e-46 Identity = 83/113 (73.45%), Postives = 93/113 (82.30%), Query Frame = 1
Query: 358 HKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKVSLWWT 696
HK L PI D G+ LA IGL+IAA GGIGGGGILVPLY++VL F PK AIPLSNITIFGGAITNT+LN+ KRHP ADRPLVDWDLI++MEPLTI GA+ GSFINKV W+
Sbjct: 78 HKKLFPIGLLDFLGIFLAAIGLVIAAGGGIGGGGILVPLYVMVLRFSPKFAIPLSNITIFGGAITNTILNIPKRHPHADRPLVDWDLIMIMEPLTIAGAIAGSFINKVLPDWS 190
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JJ89_9STRA) HSP 1 Score: 170 bits (431), Expect = 4.930e-46 Identity = 81/108 (75.00%), Postives = 91/108 (84.26%), Query Frame = 1
Query: 358 HKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKV 681
HKPL P+ G D G A IGLM+AA GGIGGGGILVP+YILV+GF PKHAIPLSNIT+FGGA+ NT LN KRHP A+RPLVDWDLILVMEPLTI GAL+G+F+NKV
Sbjct: 120 HKPLRPLGGNDFVGFFCATIGLMVAAGGGIGGGGILVPIYILVMGFSPKHAIPLSNITVFGGALANTYLNTRKRHPLAERPLVDWDLILVMEPLTIAGALIGAFLNKV 227
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYB8_9STRA) HSP 1 Score: 166 bits (419), Expect = 5.090e-46 Identity = 78/108 (72.22%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 358 HKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKV 681
HK LHP+D D G A +GL++AA GGIGGGG+LVP++ILV+GF PKHAIPLSNIT+FGGAI NT+LN KRHP A+RPLVDWDLILVMEPLTI GAL+G+F+NKV
Sbjct: 84 HKRLHPLDASDKYGFFFATLGLIVAAGGGIGGGGVLVPIFILVMGFSPKHAIPLSNITVFGGAIANTMLNYPKRHPHANRPLVDWDLILVMEPLTIAGALLGAFLNKV 191 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8011.16181.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8011.16181.1 >prot_E_fasciculatus_S2_contig8011.16181.1 ID=prot_E_fasciculatus_S2_contig8011.16181.1|Name=mRNA_E_fasciculatus_S2_contig8011.16181.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=242bp MSRYARPALLAGLCLSVLSLGVLTRTGDDNVFLSFGVGGGAEKENTGATAback to top mRNA from alignment at E_fasciculatus_S2_contig8011:90..1046- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8011.16181.1 ID=mRNA_E_fasciculatus_S2_contig8011.16181.1|Name=mRNA_E_fasciculatus_S2_contig8011.16181.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=957bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8011:90..1046- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8011:90..1046- >mRNA_E_fasciculatus_S2_contig8011.16181.1 ID=mRNA_E_fasciculatus_S2_contig8011.16181.1|Name=mRNA_E_fasciculatus_S2_contig8011.16181.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=726bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8011:90..1046- (Ectocarpus fasciculatus EfasUO2)back to top |