mRNA_E_fasciculatus_S2_contig8008.16177.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC5_ECTSI) HSP 1 Score: 721 bits (1861), Expect = 8.570e-239 Identity = 901/1185 (76.03%), Postives = 916/1185 (77.30%), Query Frame = 1
Query: 58 MSVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGQPVAGDASVPAAGSEDVVLEDKAAAXXXXXXEAGPEAEAXXXXXXXXXXAAGPLGFSTADPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGESSSPAADAADAAGRPELTVEVGDVVNGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSGNAAGRPTFERKSSSVMDLIREREKAAQSARLPPSARKETSAAHSPSLAAALTRGKAGARPWLGSSGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKVASLAPAEAXXXXXXXXXXX---------EKALSPSMAAARMRKTVDRSMWSSAPSSSGAGSSRPGLSATWAFNSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIRANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPASPAGFAAAKALFASTGGIPSSSKPSVPPPSKPRASTGXXXXXXXXXXXXXXXXXXXXXR-----ATTKPWEKKTPAXXXXXXXXXSWGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPRVSXXXXXXXXAQLSSSSVFGSTGGSVKAMSRDIFGSSSSGFKRPPTGGVALAGFGLTPPAP-AREVPQVAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPRRVXXXXXXNGNVGAMWRRAVGSDHPANSGDEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------SRDGELTDEMLSKAYDSVEAASQSGGLSPIQFSSLWRSLSGDRQNLFAEMKMFHKFNTSGNSVVDFE 3549
MSVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P A A VPAAGS+DVVLEDKAA A EAE AGPLGFST DP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGRPELTVEVGDVVNG XXXXXXXXXXXXXXXX RPSG+ GRPTFERKSSSVMDLIREREKAAQSARLPPSARKETSA HSPSLAAALTRGK GA+PW+G+S N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX EKALSPSMAAARMRKTVDRSMWSSAPSSSGAGS PGLSATWAFNSAA XXXXXXXXXXXXXX PAGFAAAKALFASTGGIPS SK S+PPPSKPR ST XXXXXXXXXXXXXXXXXXXX R ATTKPWEKK XXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX LSSSSVFGSTGGSVKAMSRD+FGSSSSGFKRPPTGGVALAGFGLT PA AR+VP+VAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAP+ APSDSSLAYKQMANICIFLR CRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTS WPRR NGNVGA+WRRAVGSDHPA+SGDEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +RDGELTDEMLSKAYDSVEAASQSGGLS IQFSSLWRSLSGDRQNLFAEMKMFHKFNTSG+SVV+FE
Sbjct: 1 MSVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PAADGAPVPAAGSDDVVLEDKAAVAEAAGGAAA-EAETATATVSAESATAGPLGFSTTDPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------AGRPELTVEVGDVVNG----XXXXXXXXXXXXXXXXLSAPSEESTIGDLGGGRRPSGSVGGRPTFERKSSSVMDLIREREKAAQSARLPPSARKETSATHSPSLAAALTRGKVGAKPWMGASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEKALSPSMAAARMRKTVDRSMWSSAPSSSGAGSG-PGLSATWAFNSAAGKXXXXXXXXXXXXXXAEETEDGASGAPPAAVADCPP------------------------------------------------------------------------------PAGFAAAKALFASTGGIPSGSKASLPPPSKPRTSTXXXXXXXXXXXXXXXXXXXXXPREPVHRATTKPWEKKXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSLSSSSVFGSTGGSVKAMSRDVFGSSSSGFKRPPTGGVALAGFGLTAPAASARKVPEVAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPITAPSDSSLAYKQMANICIFLRCCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTSGGSGKASSLRASTGGISGRGGGGVSGS-WPRR-GGSTGGNGNVGAVWRRAVGSDHPASSGDEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDGELTDEMLSKAYDSVEAASQSGGLSTIQFSSLWRSLSGDRQNLFAEMKMFHKFNTSGDSVVNFE 1086
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G5_9PHAE) HSP 1 Score: 657 bits (1695), Expect = 4.140e-208 Identity = 857/1192 (71.90%), Postives = 875/1192 (73.41%), Query Frame = 1
Query: 19 SGAPNCLSVVAGVMSVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGQPVAGDASVPAAGSEDVVLEDKAAAXXXXXXEAGPEAEAXXXXXXXXXXAAGPLGFSTADPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGES--SSPAADAADAAGRPELTVEVGDVVNGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSGNAAGRPTFERKSSSVMDLIREREKAAQSARLPPSARKETSAAHSPSLAAALTRGKAGARPWLGSSGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------DKVASLAPAEAXXXXXXXXXXXEKALSPSMAAARMRKTVDRSMWSSAPSSSGAGSSRPGLSATWAFNSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIRANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPASPAGFAAAKALFASTGGIPSSSKPSVPPPSKPRASTGXXXXXXXXXXXXXXXXXXXXX-----RATTKPWEKKTPAXXXXXXXXXSWGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPRVSXXXXXXXXAQLSSSSVFGSTGGSVKAMSRDIFGSSSSGFKRPPTGGVALAGFGLTPPAPAREVPQVAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPRRVXXXXXXNGNVGAMWRRAVGSDHPANSGDEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GSRDGELTDEMLSKAYDSVEAASQSGGLSPIQFSSLWRSLSGDRQNLFAEMKMFHKFNTSGNSVVDFE 3549
SGAPNCLSVVAGV SVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYE XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX XXXXX XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX ES SSP A AA AG PELTVEVG+VVNG XXXXXXXXXXXXXXX +PSG+ GRPTFERK+SSVMDLIREREKAAQSARLPPSARKETS HSP LAAALTRGK G +PWLG+S N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +KVA LA AEA + A+SPSMAAARMRKTVDRS+WSSAPSSSGAGS PGLSATWA SAA GGIRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGFAAAKALFASTGGIPS SK S+ XXXXXXXXXXXXXXXXXXXXX RATTKPWE XXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX LSSSSVFGSTGGSVKAMSRDIFGSSSSGFKRPPTGGVALAGFGLT PA REVP+VAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAP+ APSDSSLAYKQMANICIFLRSCR LGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTS WPRR NGNVGA+WRRAVGSDHP +S DEG XXXXXXXXXXXXXXXX XXXXXXXXXX G+RDGELTDEMLSKAYDSVEAASQSGGLSPIQFSSLWRSLSGDR NLFAEMKMFHKFNTSG+SVV+FE
Sbjct: 481 SGAPNCLSVVAGVTSVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYEXXXXXXXXXXXXXXXXFARSKRNSPPRPRSQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDGDNADVVXXXXXXXXXXXXXXXXXXXXXXXANESLPSSPTAAAA-CAGSPELTVEVGEVVNG----XXXXXXXXXXXXXXXALSAPSEVSITGDLGGGRQPSGSVGGRPTFERKTSSVMDLIREREKAAQSARLPPSARKETSVMHSPGLAAALTRGKVGTKPWLGASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEKVAGLAAAEASAGAGG-----KMAMSPSMAAARMRKTVDRSLWSSAPSSSGAGSG-PGLSATWAVRSAAGKEQKSSDEAAQESGLAEETVDGASGAPAPAVADCPPPAGFAAAKAIFAST---------GGIRAISRPTAASAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGFAAAKALFASTGGIPSGSKASMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPVPRATTKPWEXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSLSSSSVFGSTGGSVKAMSRDIFGSSSSGFKRPPTGGVALAGFGLTAPAAPREVPEVAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPITAPSDSSLAYKQMANICIFLRSCRNLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTSGGSGKASRFRASTGGISGRGGGGVSGS-WPRRAGSSGG-NGNVGAVWRRAVGSDHPTSSEDEGXXXXXXXXXXXXXXXXXDADEAVGSGSAAAAANXXXXXXXXXXXGARDGELTDEMLSKAYDSVEAASQSGGLSPIQFSSLWRSLSGDRHNLFAEMKMFHKFNTSGDSVVNFE 1638
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Muscular (protein 20 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCR7_9STRA) HSP 1 Score: 102 bits (254), Expect = 7.450e-21 Identity = 50/116 (43.10%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHL 2973
EEEV +W+ V K + A +L+DG LCRLM+++QPG+ + + S++ +KQM NI +FL +CRTLG+ FET DL++ K++ V++ L +LG V CP+F GPHL
Sbjct: 9 EEEVQQWIEGVLKEPFPEDLTFAEALRDGTRLCRLMNEIQPGS-VKKINSSTMMFKQMENISLFLAACRTLGVPSFDCFETNDLFQVKNMQGVLRCLDSLGRTVQAKCPSFAGPHL 123
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Calponin (homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB8_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.700e-20 Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHL 2973
E +W+ VT++ E A +LKDG LC+L++ ++PG + + SS+ +KQM NI +L+ CR LG+ E LFET DLYEEKDI V+K L ALG + S P F GPHL
Sbjct: 28 EHAAQEWIEAVTRVKF--EGTFAAALKDGSVLCKLLNAIRPGT-VKKINTSSMPFKQMENISAYLKGCRALGVAEHSLFETVDLYEEKDISLVIKCLFALGSTIQSSVPEFHGPHL 140
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Calponin (homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ8_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.460e-19 Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHL 2973
E +W+ VT + E A SLKDG LC+L++ ++PG + + S + +KQM NI FL++CRTLG+ E LFET DL+EEKD+ V++ L ALG V S P F GPHL
Sbjct: 27 ERTAQEWMEAVTGVKF--EGSFASSLKDGTLLCQLINAIKPGT-IKRINSSKMPFKQMENISNFLKACRTLGVAEYSLFETVDLFEEKDVGLVIRCLFALGSAVQSSTPEFAGPHL 139
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5N1_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.310e-18 Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSK 2985
E E +W+ ++ ++I + G LKDGV LC + +K+ PG + S + +KQM N+ FL++CR +G+ E LFET DL+E KD+ NVV+ + ALG V RS P F GP L + +
Sbjct: 79 ENEARQWIEAISGMEIGDDFGTG--LKDGVILCSVANKIHPGIVRRVETKSKMPFKQMENVSGFLKACRVMGVNEFDLFETVDLFELKDLGNVVRCIFALGRSVQRSYPDFNGPTLGVKE 196
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Calponin-homology ((CH) domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y836_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.530e-18 Identity = 48/120 (40.00%), Postives = 76/120 (63.33%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSK 2985
E+E +W+ +T I P+ G+ LKDGV LC L + + P + + S S + ++QM N+ F+R+CR +G+ E LFET DLYE+KD+ VV+ L ALG + ++ P++KGP L + +
Sbjct: 27 EDEAREWIEAITGRSIGPDFGLG--LKDGVILCELANSVDPSSRIKI-SSSQMPFRQMENVTAFIRACRAIGVMEFDLFETVDLYEQKDLGVVVRCLHALGRTLQKN-PSYKGPILGVKE 142
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVG1_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.800e-18 Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 1
Query: 2614 GPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSK 2985
GP EEE W+ V LD SLKDGV LC LM+K++PG + +S++ +KQM N+ FLR+CRTLG+ E LFET DLYE+K++ VV + ALG + ++ P + GP L + +
Sbjct: 285 GPTAEEEAQTWIETV--LDEKFLASFGDSLKDGVMLCALMNKVKPGL-IPKIQNSTMPFKQMENVTSFLRACRTLGVAEFDLFETVDLYEQKNLGQVVHCIHALGRTLQKNVPEYDGPRLGVKE 405
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Calponin (n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXD2_PLAHL) HSP 1 Score: 99.4 bits (246), Expect = 1.070e-17 Identity = 46/120 (38.33%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSK 2985
E+E +W+ +++++I + G L+DG+ LC + +K+ PG S + +K M N+ FL++CR +G+ E LFET DL+E KD+ NVV+ + ALG V R+ P FKGP L + +
Sbjct: 33 EDEACEWLETISEMEIGEDFG--EGLRDGIILCTVANKIHPGVVKRIEMKSKMPFKLMENVSAFLKACRVMGVNEFDLFETVDLFELKDLGNVVRCIFALGRAVQRNYPDFKGPTLGVKE 150
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WDR1_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.140e-16 Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 1
Query: 2614 GPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSK 2985
GP EEE +W+ V G SLKDGV LC LM+K+QPG + SS+ +KQM N+ F+R+CR +G+ E LFET DL+ +K+I VV+ + ALG + ++ P + GP L + +
Sbjct: 291 GPTTEEEAQEWIEAVLGEKFLASFG--DSLKDGVILCTLMNKIQPGL-IPKIQSSSMPFKQMENVSSFVRACRAIGVAEFDLFETVDLFNQKNIGQVVQCIHALGRTIQKTMPEYDGPRLGVKE 411 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8008.16177.1 >prot_E_fasciculatus_S2_contig8008.16177.1 ID=prot_E_fasciculatus_S2_contig8008.16177.1|Name=mRNA_E_fasciculatus_S2_contig8008.16177.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1183bp MCVTDQSGAPNCLSVVAGVMSVVLQALNRQDALSWASHLYQASAVANGGGback to top mRNA from alignment at E_fasciculatus_S2_contig8008:494..7038- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8008.16177.1 ID=mRNA_E_fasciculatus_S2_contig8008.16177.1|Name=mRNA_E_fasciculatus_S2_contig8008.16177.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6545bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8008:494..7038- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8008:494..7038- >mRNA_E_fasciculatus_S2_contig8008.16177.1 ID=mRNA_E_fasciculatus_S2_contig8008.16177.1|Name=mRNA_E_fasciculatus_S2_contig8008.16177.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=3549bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8008:494..7038- (Ectocarpus fasciculatus EfasUO2)back to top |