mRNA_E_fasciculatus_S2_contig8008.16177.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8008.16177.1
Unique NamemRNA_E_fasciculatus_S2_contig8008.16177.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC5_ECTSI)

HSP 1 Score: 721 bits (1861), Expect = 8.570e-239
Identity = 901/1185 (76.03%), Postives = 916/1185 (77.30%), Query Frame = 1
Query:   58 MSVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGQPVAGDASVPAAGSEDVVLEDKAAAXXXXXXEAGPEAEAXXXXXXXXXXAAGPLGFSTADPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGESSSPAADAADAAGRPELTVEVGDVVNGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSGNAAGRPTFERKSSSVMDLIREREKAAQSARLPPSARKETSAAHSPSLAAALTRGKAGARPWLGSSGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKVASLAPAEAXXXXXXXXXXX---------EKALSPSMAAARMRKTVDRSMWSSAPSSSGAGSSRPGLSATWAFNSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIRANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPASPAGFAAAKALFASTGGIPSSSKPSVPPPSKPRASTGXXXXXXXXXXXXXXXXXXXXXR-----ATTKPWEKKTPAXXXXXXXXXSWGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPRVSXXXXXXXXAQLSSSSVFGSTGGSVKAMSRDIFGSSSSGFKRPPTGGVALAGFGLTPPAP-AREVPQVAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPRRVXXXXXXNGNVGAMWRRAVGSDHPANSGDEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------SRDGELTDEMLSKAYDSVEAASQSGGLSPIQFSSLWRSLSGDRQNLFAEMKMFHKFNTSGNSVVDFE 3549
            MSVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    P A  A VPAAGS+DVVLEDKAA        A  EAE            AGPLGFST DP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             AGRPELTVEVGDVVNG    XXXXXXXXXXXXXXXX                 RPSG+  GRPTFERKSSSVMDLIREREKAAQSARLPPSARKETSA HSPSLAAALTRGK GA+PW+G+S N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXX         EKALSPSMAAARMRKTVDRSMWSSAPSSSGAGS  PGLSATWAFNSAA  XXXXXXXXXXXXXX                                                                                                   PAGFAAAKALFASTGGIPS SK S+PPPSKPR ST XXXXXXXXXXXXXXXXXXXX R     ATTKPWEKK   XXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXX   LSSSSVFGSTGGSVKAMSRD+FGSSSSGFKRPPTGGVALAGFGLT PA  AR+VP+VAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAP+ APSDSSLAYKQMANICIFLR CRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTS                            WPRR       NGNVGA+WRRAVGSDHPA+SGDEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +RDGELTDEMLSKAYDSVEAASQSGGLS IQFSSLWRSLSGDRQNLFAEMKMFHKFNTSG+SVV+FE
Sbjct:    1 MSVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PAADGAPVPAAGSDDVVLEDKAAVAEAAGGAAA-EAETATATVSAESATAGPLGFSTTDPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------AGRPELTVEVGDVVNG----XXXXXXXXXXXXXXXXLSAPSEESTIGDLGGGRRPSGSVGGRPTFERKSSSVMDLIREREKAAQSARLPPSARKETSATHSPSLAAALTRGKVGAKPWMGASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEKALSPSMAAARMRKTVDRSMWSSAPSSSGAGSG-PGLSATWAFNSAAGKXXXXXXXXXXXXXXAEETEDGASGAPPAAVADCPP------------------------------------------------------------------------------PAGFAAAKALFASTGGIPSGSKASLPPPSKPRTSTXXXXXXXXXXXXXXXXXXXXXPREPVHRATTKPWEKKXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSLSSSSVFGSTGGSVKAMSRDVFGSSSSGFKRPPTGGVALAGFGLTAPAASARKVPEVAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPITAPSDSSLAYKQMANICIFLRCCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTSGGSGKASSLRASTGGISGRGGGGVSGS-WPRR-GGSTGGNGNVGAVWRRAVGSDHPASSGDEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDGELTDEMLSKAYDSVEAASQSGGLSTIQFSSLWRSLSGDRQNLFAEMKMFHKFNTSGDSVVNFE 1086          
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G5_9PHAE)

HSP 1 Score: 657 bits (1695), Expect = 4.140e-208
Identity = 857/1192 (71.90%), Postives = 875/1192 (73.41%), Query Frame = 1
Query:   19 SGAPNCLSVVAGVMSVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGQPVAGDASVPAAGSEDVVLEDKAAAXXXXXXEAGPEAEAXXXXXXXXXXAAGPLGFSTADPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGES--SSPAADAADAAGRPELTVEVGDVVNGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSGNAAGRPTFERKSSSVMDLIREREKAAQSARLPPSARKETSAAHSPSLAAALTRGKAGARPWLGSSGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------DKVASLAPAEAXXXXXXXXXXXEKALSPSMAAARMRKTVDRSMWSSAPSSSGAGSSRPGLSATWAFNSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIRANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPASPAGFAAAKALFASTGGIPSSSKPSVPPPSKPRASTGXXXXXXXXXXXXXXXXXXXXX-----RATTKPWEKKTPAXXXXXXXXXSWGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPRVSXXXXXXXXAQLSSSSVFGSTGGSVKAMSRDIFGSSSSGFKRPPTGGVALAGFGLTPPAPAREVPQVAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPRRVXXXXXXNGNVGAMWRRAVGSDHPANSGDEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GSRDGELTDEMLSKAYDSVEAASQSGGLSPIQFSSLWRSLSGDRQNLFAEMKMFHKFNTSGNSVVDFE 3549
            SGAPNCLSVVAGV SVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYE XXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXX                             XXXXX        XXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXX  ES  SSP A AA  AG PELTVEVG+VVNG    XXXXXXXXXXXXXXX                  +PSG+  GRPTFERK+SSVMDLIREREKAAQSARLPPSARKETS  HSP LAAALTRGK G +PWLG+S N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +KVA LA AEA           + A+SPSMAAARMRKTVDRS+WSSAPSSSGAGS  PGLSATWA  SAA                                                            GGIRA           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     AGFAAAKALFASTGGIPS SK S+           XXXXXXXXXXXXXXXXXXXXX     RATTKPWE     XXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXX   LSSSSVFGSTGGSVKAMSRDIFGSSSSGFKRPPTGGVALAGFGLT PA  REVP+VAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAP+ APSDSSLAYKQMANICIFLRSCR LGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTS                            WPRR       NGNVGA+WRRAVGSDHP +S DEG XXXXXXXXXXXXXXXX                XXXXXXXXXX G+RDGELTDEMLSKAYDSVEAASQSGGLSPIQFSSLWRSLSGDR NLFAEMKMFHKFNTSG+SVV+FE
Sbjct:  481 SGAPNCLSVVAGVTSVVLQALNRQDALSWASHLYQASAVANGGGYLLDQERDQEVAYEXXXXXXXXXXXXXXXXFARSKRNSPPRPRSQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDGDNADVVXXXXXXXXXXXXXXXXXXXXXXXANESLPSSPTAAAA-CAGSPELTVEVGEVVNG----XXXXXXXXXXXXXXXALSAPSEVSITGDLGGGRQPSGSVGGRPTFERKTSSVMDLIREREKAAQSARLPPSARKETSVMHSPGLAAALTRGKVGTKPWLGASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEKVAGLAAAEASAGAGG-----KMAMSPSMAAARMRKTVDRSLWSSAPSSSGAGSG-PGLSATWAVRSAAGKEQKSSDEAAQESGLAEETVDGASGAPAPAVADCPPPAGFAAAKAIFAST---------GGIRAISRPTAASAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGFAAAKALFASTGGIPSGSKASMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPVPRATTKPWEXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSLSSSSVFGSTGGSVKAMSRDIFGSSSSGFKRPPTGGVALAGFGLTAPAAPREVPEVAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPITAPSDSSLAYKQMANICIFLRSCRNLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWSTVLAQPSSTSGGSGKASRFRASTGGISGRGGGGVSGS-WPRRAGSSGG-NGNVGAVWRRAVGSDHPTSSEDEGXXXXXXXXXXXXXXXXXDADEAVGSGSAAAAANXXXXXXXXXXXGARDGELTDEMLSKAYDSVEAASQSGGLSPIQFSSLWRSLSGDRHNLFAEMKMFHKFNTSGDSVVNFE 1638          
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Muscular (protein 20 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCR7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 7.450e-21
Identity = 50/116 (43.10%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHL 2973
            EEEV +W+  V K     +   A +L+DG  LCRLM+++QPG+ +   + S++ +KQM NI +FL +CRTLG+     FET DL++ K++  V++ L +LG  V   CP+F GPHL
Sbjct:    9 EEEVQQWIEGVLKEPFPEDLTFAEALRDGTRLCRLMNEIQPGS-VKKINSSTMMFKQMENISLFLAACRTLGVPSFDCFETNDLFQVKNMQGVLRCLDSLGRTVQAKCPSFAGPHL 123          
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Calponin (homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB8_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.700e-20
Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHL 2973
            E    +W+  VT++    E   A +LKDG  LC+L++ ++PG  +   + SS+ +KQM NI  +L+ CR LG+ E  LFET DLYEEKDI  V+K L ALG  +  S P F GPHL
Sbjct:   28 EHAAQEWIEAVTRVKF--EGTFAAALKDGSVLCKLLNAIRPGT-VKKINTSSMPFKQMENISAYLKGCRALGVAEHSLFETVDLYEEKDISLVIKCLFALGSTIQSSVPEFHGPHL 140          
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Calponin (homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ8_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.460e-19
Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHL 2973
            E    +W+  VT +    E   A SLKDG  LC+L++ ++PG  +   + S + +KQM NI  FL++CRTLG+ E  LFET DL+EEKD+  V++ L ALG  V  S P F GPHL
Sbjct:   27 ERTAQEWMEAVTGVKF--EGSFASSLKDGTLLCQLINAIKPGT-IKRINSSKMPFKQMENISNFLKACRTLGVAEYSLFETVDLFEEKDVGLVIRCLFALGSAVQSSTPEFAGPHL 139          
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5N1_9STRA)

HSP 1 Score: 101 bits (251), Expect = 3.310e-18
Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSK 2985
            E E  +W+  ++ ++I  + G    LKDGV LC + +K+ PG      + S + +KQM N+  FL++CR +G+ E  LFET DL+E KD+ NVV+ + ALG  V RS P F GP L + +
Sbjct:   79 ENEARQWIEAISGMEIGDDFGTG--LKDGVILCSVANKIHPGIVRRVETKSKMPFKQMENVSGFLKACRVMGVNEFDLFETVDLFELKDLGNVVRCIFALGRSVQRSYPDFNGPTLGVKE 196          
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Calponin-homology ((CH) domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y836_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.530e-18
Identity = 48/120 (40.00%), Postives = 76/120 (63.33%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSK 2985
            E+E  +W+  +T   I P+ G+   LKDGV LC L + + P + +   S S + ++QM N+  F+R+CR +G+ E  LFET DLYE+KD+  VV+ L ALG  + ++ P++KGP L + +
Sbjct:   27 EDEAREWIEAITGRSIGPDFGLG--LKDGVILCELANSVDPSSRIKI-SSSQMPFRQMENVTAFIRACRAIGVMEFDLFETVDLYEQKDLGVVVRCLHALGRTLQKN-PSYKGPILGVKE 142          
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVG1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.800e-18
Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 1
Query: 2614 GPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSK 2985
            GP  EEE   W+  V  LD         SLKDGV LC LM+K++PG  +    +S++ +KQM N+  FLR+CRTLG+ E  LFET DLYE+K++  VV  + ALG  + ++ P + GP L + +
Sbjct:  285 GPTAEEEAQTWIETV--LDEKFLASFGDSLKDGVMLCALMNKVKPGL-IPKIQNSTMPFKQMENVTSFLRACRTLGVAEFDLFETVDLYEQKNLGQVVHCIHALGRTLQKNVPEYDGPRLGVKE 405          
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Calponin (n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXD2_PLAHL)

HSP 1 Score: 99.4 bits (246), Expect = 1.070e-17
Identity = 46/120 (38.33%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 2626 EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSK 2985
            E+E  +W+  +++++I  + G    L+DG+ LC + +K+ PG        S + +K M N+  FL++CR +G+ E  LFET DL+E KD+ NVV+ + ALG  V R+ P FKGP L + +
Sbjct:   33 EDEACEWLETISEMEIGEDFG--EGLRDGIILCTVANKIHPGVVKRIEMKSKMPFKLMENVSAFLKACRVMGVNEFDLFETVDLFELKDLGNVVRCIFALGRAVQRNYPDFKGPTLGVKE 150          
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WDR1_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.140e-16
Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 1
Query: 2614 GPWDEEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSK 2985
            GP  EEE  +W+  V         G   SLKDGV LC LM+K+QPG  +     SS+ +KQM N+  F+R+CR +G+ E  LFET DL+ +K+I  VV+ + ALG  + ++ P + GP L + +
Sbjct:  291 GPTTEEEAQEWIEAVLGEKFLASFG--DSLKDGVILCTLMNKIQPGL-IPKIQSSSMPFKQMENVSSFVRACRAIGVAEFDLFETVDLFNQKNIGQVVQCIHALGRTIQKTMPEYDGPRLGVKE 411          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8008.16177.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized8.570e-23976.03protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.140e-20871.90protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Muscular7.450e-2143.10protein 20 n=1 Tax=Nannochloropsis gaditana TaxID=... [more]
Calponin1.700e-2045.69homology domain-containing protein n=1 Tax=Tribone... [more]
Calponin3.460e-1945.69homology domain-containing protein n=1 Tax=Tribone... [more]
Uncharacterized3.310e-1840.83protein (Fragment) n=2 Tax=Nothophytophthora sp. C... [more]
Calponin-homology3.530e-1840.00(CH) domain-containing protein (Fragment) n=1 Tax=... [more]
Uncharacterized5.800e-1843.55protein n=3 Tax=Phytophthora kernoviae TaxID=32545... [more]
Calponin1.070e-1738.33n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0... [more]
Uncharacterized1.140e-1641.13protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8008contigE_fasciculatus_S2_contig8008:494..7038 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score735.3
Seed ortholog evalue4.4e-209
Seed eggNOG ortholog2880.D7FRC5
Model size3549
KEGG koko:K15411,ko:K19951,ko:K20526
KEGG Pathwayko05168,map05168
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.actin binding
EggNOG OGsCOG5199@1,KOG2046@2759
Ec32 ortholog descriptionPleckstrin homology-like domain
Ec32 orthologEc-26_002650.1
Cds size3549
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8008.16177.1prot_E_fasciculatus_S2_contig8008.16177.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8008 494..7038 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842462.8374288-CDS-E_fasciculatus_S2_contig8008:493..6731696842462.8374288-CDS-E_fasciculatus_S2_contig8008:493..673Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8008 494..673 -
1696842462.8475463-CDS-E_fasciculatus_S2_contig8008:1657..21581696842462.8475463-CDS-E_fasciculatus_S2_contig8008:1657..2158Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8008 1658..2158 -
1696842462.8563437-CDS-E_fasciculatus_S2_contig8008:2619..26911696842462.8563437-CDS-E_fasciculatus_S2_contig8008:2619..2691Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8008 2620..2691 -
1696842462.8652184-CDS-E_fasciculatus_S2_contig8008:3122..32841696842462.8652184-CDS-E_fasciculatus_S2_contig8008:3122..3284Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8008 3123..3284 -
1696842462.8740978-CDS-E_fasciculatus_S2_contig8008:3619..60441696842462.8740978-CDS-E_fasciculatus_S2_contig8008:3619..6044Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8008 3620..6044 -
1696842462.8875947-CDS-E_fasciculatus_S2_contig8008:6421..65071696842462.8875947-CDS-E_fasciculatus_S2_contig8008:6421..6507Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8008 6422..6507 -
1696842462.9022346-CDS-E_fasciculatus_S2_contig8008:6915..70381696842462.9022346-CDS-E_fasciculatus_S2_contig8008:6915..7038Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8008 6916..7038 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8008.16177.1

>prot_E_fasciculatus_S2_contig8008.16177.1 ID=prot_E_fasciculatus_S2_contig8008.16177.1|Name=mRNA_E_fasciculatus_S2_contig8008.16177.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1183bp
MCVTDQSGAPNCLSVVAGVMSVVLQALNRQDALSWASHLYQASAVANGGG
YLLDQERDQEVAYEEERRRRLAQEASERERFARSKRNSPQRPRSQAEEEQ
KEEEAGQPQQLQQQEGEDGQPVAGDASVPAAGSEDVVLEDKAAAAAAAGG
EAGPEAEAATATVSAESAAAGPLGFSTADPAAAAAAAAAAAAVAVAAPVD
DDAPAAARDSEQRSLDDDADEGVVVVPEDAGAGAGDDDSGGDASKKEDAD
ADANGESSSPAADAADAAGRPELTVEVGDVVNGGTSAAAAAASGGTAAAL
SAPSEEESAIGDLGGGGGGRRPSGNAAGRPTFERKSSSVMDLIREREKAA
QSARLPPSARKETSAAHSPSLAAALTRGKAGARPWLGSSGNNTPAAATST
PRGGSSMFFSSTPKGSTAAAARSGFSATAPAVASTGGDDATAGKEEEEEE
DKVASLAPAEASAGAGGGAGAGEKALSPSMAAARMRKTVDRSMWSSAPSS
SGAGSSRPGLSATWAFNSAAAGKQQKSSEEAAQKGGPAAETEDEGSAAAT
TTATASTPAAVVDCPPPAGFAAAKAMFASTGGIRANSRPAAASAVAAADV
LAAAAAERESSATAAAAGAGAGSSSVQQEVVVPASPAGFAAAKALFASTG
GIPSSSKPSVPPPSKPRASTGTAAAAYARAAATSNSTSVPAPRATTKPWE
KKTPAAGGGGASGASWGSAASASASASASASASASASAAAAATTDSSSDE
DGEPSSSAGGGRSLSPVTTPGAGGAAAKGSTSRHHQKSSEPRVSPAPAPA
PAAQLSSSSVFGSTGGSVKAMSRDIFGSSSSGFKRPPTGGVALAGFGLTP
PAPAREVPQVAAPPLESRPIGGPWDEEEVLKWVRDVTKLDIDPECGVAYS
LKDGVALCRLMSKLQPGAPMAAPSDSSLAYKQMANICIFLRSCRTLGLGE
SILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGPHLNMSKFAWST
VLAQPSSTSGGGSSKAASLRASTGGLSGRGGGGASGSWPRRVSSGGGGNG
NVGAMWRRAVGSDHPANSGDEGSSEDDEDDDDDYDSDEEEYDDEDEATGS
ARANGGSRAAAATGGGSRDGELTDEMLSKAYDSVEAASQSGGLSPIQFSS
LWRSLSGDRQNLFAEMKMFHKFNTSGNSVVDFE
back to top

mRNA from alignment at E_fasciculatus_S2_contig8008:494..7038-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8008.16177.1 ID=mRNA_E_fasciculatus_S2_contig8008.16177.1|Name=mRNA_E_fasciculatus_S2_contig8008.16177.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6545bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8008:494..7038- (Ectocarpus fasciculatus EfasUO2)
ATGTGTGTGACGGATCAGAGCGGTGCCCCTAACTGCCTGTCGGTCGTGGC GGGAGTCATGTCCGTCGTGCTGCAGGCGTTGAATCGCCAGGACGCCTTGT CGTGGGCGAGCCATCTCTACCAGGTGAACACGGGAATAACAGTACCGTTG TCTGCCCATATTTATCTGGTAGTTTAACCGTTTTTGCGCCGGGGCGCATC CATCAGTCCGTGTTGAAATGTTGAGTAGTACGTGTACTTTTTTACTGATG TTGAGTCGGATGGGTCGTGCCTCGGTGGGTACAGTATGGTTTGTATGTAT TGGAGGACCCTCCCCCAATCATCTGATAAGTTGCACTATCCGTCGTCAAA TATACGGACCATTGTGGTATTTGCGCTTGTATCCGAATGGCCGTTACAAT TGCGAACAGCAGTGTGGTATCATTCAAGGCTATTACTCCGTGACGGCTAT TACTCCGTGACGGATCAACCCCCTCTGATTGATACCTTGTTGTATCTAAA CTCGATTTGACGCCTCCGATGATCGGTACAGGCAAGTGCGGTGGCCAACG GCGGAGGCTACCTGTTGGACCAGGAGAGGGACCAGGAGGTCGCCTACGAG GAGGAGAGACGCCGCAGGTGCCTTGTCTTGTCTTGTGTTCGCGCACCGTA CGTACGTCGTGTGCTGAAGGCTTGTGTTTGCTTTGCCACCTATTGTTGAG CTCTCTCTTCTCCCCCTGTGTTGAACTCGGTGTTGTCGCTTGTGTCGTTG CGCTTGCTGTGATGCTTGCGTATCCCCCTCTCGGCCTCTGCGTTTGCCCC CCTTTTAGTTGCGACTGACCGCCGTGTGTTCTTTTGTTCTTTTCTGTGCC TTAATACCTGTGCTTCGACTAACTCAAGACTTGCCTCTTCTTGTCTCTCC GCCCGTGTTTCCTCCCCATTTCTGTCGCTGCCCGCGTTTGGCTTTGGCAC GAAATGGGTGGGTTGATGGAATGAATCTCCGTTTGAACAACCAGGCTTGC CCAGGAAGCCTCAGAGCGGGAGCGGTTCGCCCGCAGCAAGCGGAACAGCC CGCAGCGACCGCGATCGCAGGCGGAAGAGGAGCAGAAGGAGGAGGAGGCG GGGCAGCCGCAACAGCTGCAGCAGCAGGAGGGGGAGGATGGACAGCCTGT AGCGGGCGACGCATCGGTACCCGCGGCCGGCTCAGAGGATGTCGTTTTGG AAGACAAGGCAGCGGCGGCGGCAGCGGCGGGAGGGGAGGCGGGACCGGAA GCCGAGGCTGCTACCGCCACGGTGTCGGCGGAAAGCGCAGCCGCGGGGCC CCTTGGTTTCTCGACGGCGGACCCCGCAGCAGCGGCAGCGGCAGCGGCAG CGGCAGCGGCGGTGGCGGTGGCCGCCCCTGTCGATGATGACGCCCCCGCC GCCGCTCGCGACAGCGAACAACGATCCCTCGACGATGACGCGGACGAGGG GGTGGTGGTGGTACCGGAGGACGCCGGCGCCGGCGCCGGAGATGATGATA GTGGCGGCGATGCCTCGAAGAAGGAAGATGCCGATGCCGATGCCAACGGC GAGTCTTCTTCTCCGGCTGCTGATGCTGCTGATGCTGCTGGTCGCCCCGA GCTGACGGTGGAAGTCGGAGACGTTGTCAACGGCGGTACGTCGGCGGCGG CGGCGGCGGCCTCGGGGGGCACGGCGGCTGCTCTCTCCGCTCCCTCGGAG GAGGAGTCGGCCATCGGCGACCTGGGTGGCGGCGGCGGCGGCAGGAGGCC TTCGGGGAATGCGGCCGGCCGGCCCACCTTCGAGAGGAAGTCTTCTTCCG TCATGGACCTAATCCGAGAGAGGGAGAAGGCCGCCCAGTCGGCCCGTCTG CCGCCGTCCGCCCGTAAGGAGACCTCGGCGGCGCACTCGCCGAGCCTGGC GGCGGCGCTGACGCGGGGCAAGGCGGGCGCCAGGCCCTGGCTGGGTTCTT CCGGGAACAACACCCCGGCCGCGGCCACGAGCACCCCGAGAGGGGGCTCT TCCATGTTCTTCTCCTCCACGCCTAAGGGTTCCACCGCAGCTGCTGCGAG GAGCGGCTTCTCCGCGACAGCCCCCGCCGTGGCCTCTACTGGCGGCGACG ATGCGACGGCCGGGAAGGAGGAAGAAGAGGAAGAGGATAAGGTTGCCAGT CTCGCGCCGGCGGAAGCAAGCGCGGGGGCCGGCGGTGGTGCCGGCGCCGG CGAGAAGGCCCTGTCGCCGTCGATGGCGGCGGCGCGGATGCGCAAGACCG TGGACCGATCTATGTGGAGCTCGGCGCCGTCGTCGAGCGGGGCGGGGAGC AGCAGGCCGGGCTTGTCGGCGACGTGGGCGTTTAACTCCGCCGCCGCCGG CAAGCAGCAGAAGAGCTCCGAGGAAGCCGCGCAGAAAGGTGGTCCGGCTG CAGAGACGGAAGACGAAGGGTCAGCGGCGGCGACGACGACGGCTACGGCG TCGACACCGGCGGCGGTAGTGGACTGCCCGCCGCCCGCCGGGTTTGCGGC GGCGAAGGCGATGTTCGCGTCGACGGGGGGCATCCGCGCCAACAGCAGGC CGGCGGCGGCATCGGCGGTTGCGGCGGCGGATGTGCTGGCAGCGGCGGCG GCAGAACGCGAATCGTCAGCAACAGCAGCAGCAGCAGGGGCTGGGGCTGG GTCATCTTCTGTGCAGCAGGAGGTGGTGGTGCCGGCCTCCCCCGCCGGCT TCGCGGCCGCCAAGGCGCTGTTCGCCTCTACCGGAGGCATCCCCTCCAGC AGCAAGCCTTCGGTGCCGCCGCCGTCCAAGCCAAGGGCCAGCACCGGCAC CGCCGCCGCCGCGTACGCGCGCGCCGCGGCCACGAGCAACTCCACCAGCG TCCCGGCCCCCAGGGCCACCACAAAGCCTTGGGAGAAGAAAACCCCGGCC GCTGGCGGCGGTGGCGCAAGCGGGGCTTCTTGGGGTTCCGCCGCTTCCGC TTCCGCTTCCGCTTCCGCTTCCGCTTCCGCTTCCGCTTCCGCTTCCGCCG CTGCCGCTGCCACGACCGACAGCAGCAGCGACGAGGACGGCGAGCCCAGC TCGTCCGCCGGGGGCGGGCGCTCCCTCTCCCCGGTCACCACCCCCGGCGC CGGCGGCGCCGCGGCCAAGGGCTCCACCTCTCGCCACCACCAGAAGAGCA GCGAGCCGCGCGTTTCCCCGGCGCCGGCGCCGGCGCCGGCGGCGCAGCTC TCGTCTTCGTCCGTGTTCGGCAGCACCGGCGGCAGTGTCAAGGCGATGAG CAGGGACATCTTCGGGTCGTCGTCGTCTGGCTTCAAGCGACCCCCGACGG GAGGGGTGGCTCTGGCCGGGTTCGGGCTGACGCCGCCGGCGCCGGCGAGG GAGGTGCCGCAGGTGGCCGCTCCCCCGCTGGAGAGCCGGCCGATCGGCGG CCCGTGGGACGAGGAGGAGGTGAGTTTACGTCGCAACTCAACGTAGCCCT ACTCCGTGTGCGGTGTGCGGTAGGCGTTCTCTGTCCCCGTTTCGTGTCGT GGTAACTTTGTTAAAACACCATGGCGCAAGTTGCCGTGTATCTGGCTCGC AGAGAGGTAAAGTTTCCGCCCTGTGGTCTTGTTTACTGCGCGAGTTCGAC CCGGTTATAGGGCAAGGTCCGCTTTCTCGTGGGCTCGTCTTTCGGTGGCC GCGAGCGTGGATTCATCGTAATTTGCTGCGTGTGGAGGACGCCCGTGCCA ACACACGAGTGCTACCTCTGACCCGCCCGCTATATCTCCTTGTGTTGGCA TCAGGTTCTCAAGTGGGTGCGGGACGTGACCAAGCTTGACATCGACCCTG AGTGCGGGGTGGCCTACAGCCTCAAGGACGGCGTGGCTCTGTGCCGCCTC ATGAGCAAGCTGCAGCCGGGGGCGCCGATGGCTGCCCCGAGCGACTCCTC CCTGGCGTACAAGCAGGTGAGAGTTGGGTTGTGGCTGTTGCTGATGTCAC TGCTGTGGCTGTGAACCGTCGAAAGGCGAAACAGTTGTTCTTCGGCGCCA AGTAAATAGATGGATTGACAGCTGTGTTTTGTAGTGCTCTGAGTTCGCTC GCTCCTGGGTGGTGTTTGCTTTGGTGAATATTGGTGTAGTAGCTGCTGCC TTGGGAGCACGGGTGGTGCTGAGGCATCACAAACCTTGGGATGAGAAGTG CTGTGCTTTCCGTCTGGTGTATGTACTGTTGGTAGTGTCGATGGCACAGG AGCAATTGCCCCCCCCGCTGCTACTGCGCAGAAAATAAACGACCGGCCGA GATATCCACTTGATCGTTGTCTTTGCTACTTCACAGAACGTCACCGCCTT TCGTTTTGCCCCCCCCCTCCCCCGTTGTGCTTGTCATTGTCTGTCAGATG GCCAACATCTGCATCTTCCTTCGGTCTTGCCGAACTCTGGGGCTTGGCGA GAGCATCTTGTTCGAAACGGTGAGGATAGCTAGCCCGGCGTCTTTTTCTT TTTTTGTAGGATTACATGCTCTGTCTCAGCGCAGCTCTCCGTTGCTTGAA ATTTTGGTGCGCTTTCGAGCTGCCCGTGTATCGGAGTAGGTGCTTTTTTT TATTGCTGTGGGGTATTGTCGTCGTTTGTTGCATGGATCCTGTCGTTGGC GCTGTTGTGTATTTTTTGTACCGCCACCTCCGCCGCTGGGGGTAGTGGTG GTTGTAATGGTGGCCGTACCCTTGGGACCACCACACTAGCACTGATGGCT GATCTGGTTTCTCCCTCTGTGTGTGTCTCTCTCTCTCTTCTATTTGTCTC TCTCTGTCTCTCTCTCGATGTCCGCTTCGTTGTCATGGCCGCGATTGCCG TCGACTCAACACCACAACAACAATAACGACAACGACAACGACAACAAAAT ACCACAAACGAACACAACGACAACGGCCAGGCGGATCTCTACGAGGAGAA GGACATCCCGAACGTCGTCAAGACCCTCGTGGCTCTCGGGGAGCACGTGC CCCGCTCCTGCCCGGCTTTCAAGGGTCCCCACCTCAACATGTCCAAGTTC GCCTGGTCAACGGTGCTGGCACAGCCGTCCTCGACCAGCGGCGGCGGAAG CAGCAAGGCCGCCAGCTTGCGCGCGAGCACCGGGGGGCTCTCTGGCCGGG GAGGGGGGGGGGCGAGCGGCTCCTGGCCCCGCCGCGTGTCCTCCGGTGGC GGCGGCAACGGCAACGTCGGGGCCATGTGGCGAAGGGCGGTGGGCAGCGA TCACCCGGCCAACAGCGGGGATGAGGGAAGCAGCGAGGATGACGAGGACG ATGATGATGACTACGACAGCGACGAGGAGGAGTACGACGATGAGGACGAG GCTACCGGGTCGGCGAGGGCGAACGGGGGGAGCCGCGCGGCGGCCGCTAC CGGCGGAGGGTCTCGGGACGGGGAGCTGACGGTGAGAGAGAGAGAGAGGG AGGGAGGGGACAGCCTTCGCGATAAATGAAGTTTCGATAGGGCAGCGAGA GAGGGTACTCAGACCCTATCCGAAAGCCATCTTCCCCGATTGCATGCTTC ATGCAACATGTTTACTTAGTTGAACAATACTGCGAAGGCTGCTGGAGGCA GGGGGGACGGTGTGCGACGTGTCTTTTATGGGAGGGGGTAGTGCCTCATG CAAAGGCATATGCCGTAGTCGTCAGACCATTCACCTCGCGTCCCTACAGT TTCTGGACGCACCGGGGGGTTGAGGGTAAGGTCGGCTAGTGTCGTGTTGG TCCGGCTTGTGGTGGTGGCGATGGTGACGACGACGGCCTGCTTGTTAGGG TTGGAGGGAGGATAAACATTTTTTTGCGGCGTTCCCGACGTTATTTTGTG GCCTATTAGAGTAGTACTTCTACCTCACGAAGGCGGAGGGGCATCTGCCT GCCTGTCGCAATCGCGCCATGTTTGTGTGCTATGATCGTTTAATGAAGAG GATAGTCAGGACACCATCCGACATGCAACCAGCCCTGCGTTCGTTCTGGT AATACAAATGGGTCTAGCCTCTCAGCGTGTCTGTCTCCGACACGTGTGCG GGGGTCTCCTTGGAGTTTTTTTTTTTTTTTTTTTATTTCTTTTCACCCCC GGCCGCCGTTCTTTGCCTTCACCGAGTTCCCTCGAATCTTTCTTCCCTTC TCTTCGATTGTTTTTGTTTTGTTATTTTAAAAAAAAAGGCTCAACCCTCC CACCCTCCCTACCCCCCCCCCCTGTGCGGGGGTCTCCTTGAATTTTTTTT TTTTTTTTTTTTCCATCTCTCTGCACCCCCGGCCGCCGTTCTATGCCTTC ACCGAGTGCCCTCGAATCTCTCTTCCCTTCTCATCGATCAGACTCAATCT CCCTGCTCCTCTTCCTTCTCCCTGACCCCCCTCCCCATCCCGTCTCCTTA CCCTTGTACCCTCAGGACGAGATGCTGTCAAAGGCGTACGACTCTGTGGA GGCGGCCTCGCAGAGCGGGGGCCTATCGCCGATCCAGTTCTCGTCCCTTT GGCGATCCCTCTCAGGCGACAGGCAAAACCTCTTCGCGGAGATGAAGATG TTCCACAAGTTCAACACGTCGGGGAACAGCGTGGTTGACTTCGAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8008:494..7038-

>mRNA_E_fasciculatus_S2_contig8008.16177.1 ID=mRNA_E_fasciculatus_S2_contig8008.16177.1|Name=mRNA_E_fasciculatus_S2_contig8008.16177.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=3549bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8008:494..7038- (Ectocarpus fasciculatus EfasUO2)
ATGTGTGTGACGGATCAGAGCGGTGCCCCTAACTGCCTGTCGGTCGTGGC
GGGAGTCATGTCCGTCGTGCTGCAGGCGTTGAATCGCCAGGACGCCTTGT
CGTGGGCGAGCCATCTCTACCAGGCAAGTGCGGTGGCCAACGGCGGAGGC
TACCTGTTGGACCAGGAGAGGGACCAGGAGGTCGCCTACGAGGAGGAGAG
ACGCCGCAGGCTTGCCCAGGAAGCCTCAGAGCGGGAGCGGTTCGCCCGCA
GCAAGCGGAACAGCCCGCAGCGACCGCGATCGCAGGCGGAAGAGGAGCAG
AAGGAGGAGGAGGCGGGGCAGCCGCAACAGCTGCAGCAGCAGGAGGGGGA
GGATGGACAGCCTGTAGCGGGCGACGCATCGGTACCCGCGGCCGGCTCAG
AGGATGTCGTTTTGGAAGACAAGGCAGCGGCGGCGGCAGCGGCGGGAGGG
GAGGCGGGACCGGAAGCCGAGGCTGCTACCGCCACGGTGTCGGCGGAAAG
CGCAGCCGCGGGGCCCCTTGGTTTCTCGACGGCGGACCCCGCAGCAGCGG
CAGCGGCAGCGGCAGCGGCAGCGGCGGTGGCGGTGGCCGCCCCTGTCGAT
GATGACGCCCCCGCCGCCGCTCGCGACAGCGAACAACGATCCCTCGACGA
TGACGCGGACGAGGGGGTGGTGGTGGTACCGGAGGACGCCGGCGCCGGCG
CCGGAGATGATGATAGTGGCGGCGATGCCTCGAAGAAGGAAGATGCCGAT
GCCGATGCCAACGGCGAGTCTTCTTCTCCGGCTGCTGATGCTGCTGATGC
TGCTGGTCGCCCCGAGCTGACGGTGGAAGTCGGAGACGTTGTCAACGGCG
GTACGTCGGCGGCGGCGGCGGCGGCCTCGGGGGGCACGGCGGCTGCTCTC
TCCGCTCCCTCGGAGGAGGAGTCGGCCATCGGCGACCTGGGTGGCGGCGG
CGGCGGCAGGAGGCCTTCGGGGAATGCGGCCGGCCGGCCCACCTTCGAGA
GGAAGTCTTCTTCCGTCATGGACCTAATCCGAGAGAGGGAGAAGGCCGCC
CAGTCGGCCCGTCTGCCGCCGTCCGCCCGTAAGGAGACCTCGGCGGCGCA
CTCGCCGAGCCTGGCGGCGGCGCTGACGCGGGGCAAGGCGGGCGCCAGGC
CCTGGCTGGGTTCTTCCGGGAACAACACCCCGGCCGCGGCCACGAGCACC
CCGAGAGGGGGCTCTTCCATGTTCTTCTCCTCCACGCCTAAGGGTTCCAC
CGCAGCTGCTGCGAGGAGCGGCTTCTCCGCGACAGCCCCCGCCGTGGCCT
CTACTGGCGGCGACGATGCGACGGCCGGGAAGGAGGAAGAAGAGGAAGAG
GATAAGGTTGCCAGTCTCGCGCCGGCGGAAGCAAGCGCGGGGGCCGGCGG
TGGTGCCGGCGCCGGCGAGAAGGCCCTGTCGCCGTCGATGGCGGCGGCGC
GGATGCGCAAGACCGTGGACCGATCTATGTGGAGCTCGGCGCCGTCGTCG
AGCGGGGCGGGGAGCAGCAGGCCGGGCTTGTCGGCGACGTGGGCGTTTAA
CTCCGCCGCCGCCGGCAAGCAGCAGAAGAGCTCCGAGGAAGCCGCGCAGA
AAGGTGGTCCGGCTGCAGAGACGGAAGACGAAGGGTCAGCGGCGGCGACG
ACGACGGCTACGGCGTCGACACCGGCGGCGGTAGTGGACTGCCCGCCGCC
CGCCGGGTTTGCGGCGGCGAAGGCGATGTTCGCGTCGACGGGGGGCATCC
GCGCCAACAGCAGGCCGGCGGCGGCATCGGCGGTTGCGGCGGCGGATGTG
CTGGCAGCGGCGGCGGCAGAACGCGAATCGTCAGCAACAGCAGCAGCAGC
AGGGGCTGGGGCTGGGTCATCTTCTGTGCAGCAGGAGGTGGTGGTGCCGG
CCTCCCCCGCCGGCTTCGCGGCCGCCAAGGCGCTGTTCGCCTCTACCGGA
GGCATCCCCTCCAGCAGCAAGCCTTCGGTGCCGCCGCCGTCCAAGCCAAG
GGCCAGCACCGGCACCGCCGCCGCCGCGTACGCGCGCGCCGCGGCCACGA
GCAACTCCACCAGCGTCCCGGCCCCCAGGGCCACCACAAAGCCTTGGGAG
AAGAAAACCCCGGCCGCTGGCGGCGGTGGCGCAAGCGGGGCTTCTTGGGG
TTCCGCCGCTTCCGCTTCCGCTTCCGCTTCCGCTTCCGCTTCCGCTTCCG
CTTCCGCTTCCGCCGCTGCCGCTGCCACGACCGACAGCAGCAGCGACGAG
GACGGCGAGCCCAGCTCGTCCGCCGGGGGCGGGCGCTCCCTCTCCCCGGT
CACCACCCCCGGCGCCGGCGGCGCCGCGGCCAAGGGCTCCACCTCTCGCC
ACCACCAGAAGAGCAGCGAGCCGCGCGTTTCCCCGGCGCCGGCGCCGGCG
CCGGCGGCGCAGCTCTCGTCTTCGTCCGTGTTCGGCAGCACCGGCGGCAG
TGTCAAGGCGATGAGCAGGGACATCTTCGGGTCGTCGTCGTCTGGCTTCA
AGCGACCCCCGACGGGAGGGGTGGCTCTGGCCGGGTTCGGGCTGACGCCG
CCGGCGCCGGCGAGGGAGGTGCCGCAGGTGGCCGCTCCCCCGCTGGAGAG
CCGGCCGATCGGCGGCCCGTGGGACGAGGAGGAGGTTCTCAAGTGGGTGC
GGGACGTGACCAAGCTTGACATCGACCCTGAGTGCGGGGTGGCCTACAGC
CTCAAGGACGGCGTGGCTCTGTGCCGCCTCATGAGCAAGCTGCAGCCGGG
GGCGCCGATGGCTGCCCCGAGCGACTCCTCCCTGGCGTACAAGCAGATGG
CCAACATCTGCATCTTCCTTCGGTCTTGCCGAACTCTGGGGCTTGGCGAG
AGCATCTTGTTCGAAACGGCGGATCTCTACGAGGAGAAGGACATCCCGAA
CGTCGTCAAGACCCTCGTGGCTCTCGGGGAGCACGTGCCCCGCTCCTGCC
CGGCTTTCAAGGGTCCCCACCTCAACATGTCCAAGTTCGCCTGGTCAACG
GTGCTGGCACAGCCGTCCTCGACCAGCGGCGGCGGAAGCAGCAAGGCCGC
CAGCTTGCGCGCGAGCACCGGGGGGCTCTCTGGCCGGGGAGGGGGGGGGG
CGAGCGGCTCCTGGCCCCGCCGCGTGTCCTCCGGTGGCGGCGGCAACGGC
AACGTCGGGGCCATGTGGCGAAGGGCGGTGGGCAGCGATCACCCGGCCAA
CAGCGGGGATGAGGGAAGCAGCGAGGATGACGAGGACGATGATGATGACT
ACGACAGCGACGAGGAGGAGTACGACGATGAGGACGAGGCTACCGGGTCG
GCGAGGGCGAACGGGGGGAGCCGCGCGGCGGCCGCTACCGGCGGAGGGTC
TCGGGACGGGGAGCTGACGGACGAGATGCTGTCAAAGGCGTACGACTCTG
TGGAGGCGGCCTCGCAGAGCGGGGGCCTATCGCCGATCCAGTTCTCGTCC
CTTTGGCGATCCCTCTCAGGCGACAGGCAAAACCTCTTCGCGGAGATGAA
GATGTTCCACAAGTTCAACACGTCGGGGAACAGCGTGGTTGACTTCGAG
back to top