mRNA_E_fasciculatus_S2_contig8005.16176.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG3_ECTSI) HSP 1 Score: 323 bits (828), Expect = 3.440e-104 Identity = 174/231 (75.32%), Postives = 181/231 (78.35%), Query Frame = 3
Query: 3 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGKSKRISARDFKVRDSGLRLAVSSSRPPQRFIASCDSPVTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCAPQVLVEEAGGVVLPLDGTGEVGMTEVAALLLMRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGSDLRLSYNKADLSSPQCVFLGRCTT 695
EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGG E CGE GLGKSKRISAR F VRDSGLRLAVSSSRPP+ FIASC S +TSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTC+PQVLVEEAGGVVLPLDGT EVGM +VAALLL+ G +LRLSYNKADLSSP+CVFLGRCTT
Sbjct: 104 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGRELCGE-GLGKSKRISARTFGVRDSGLRLAVSSSRPPREFIASCGSSLTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCSPQVLVEEAGGVVLPLDGTEEVGMADVAALLLLLRAENAPAAAATSAESAATGGEASVGKKASPT------GSGELRLSYNKADLSSPRCVFLGRCTT 327
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V8L1_9CHLO) HSP 1 Score: 106 bits (265), Expect = 7.030e-22 Identity = 64/150 (42.67%), Postives = 90/150 (60.00%), Query Frame = 3
Query: 3 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGKSKRISARDFKVRDSGLRLAVSSSRPPQR---FIASCDSPVTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCAPQVLVEEAGGVVL 443
EF+KR G+F V I L + P+LGVVH P + KTY+A +GA++ +G GE K +RI A F ++D GL + SSS P Q+ F+ DSP T +GS+ LK + VA+G+ ++P + EWDT A ++V EAGGVVL
Sbjct: 140 EFLKRNGEFTVNIALMYKDHPILGVVHVPV--SGKTYWAVKEKGAWLRQGTGEGR------KQERIRAAKFGLQDKGLSIVGSSSHPSQQTAEFMELFDSPNTLQVGSS-LKLLMVAEGSAHIYPRMVPCCEWDTAAADIIVSEAGGVVL 280
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Match: Uncharacterized (protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383WIR4_TETOB) HSP 1 Score: 104 bits (260), Expect = 2.080e-21 Identity = 68/165 (41.21%), Postives = 95/165 (57.58%), Query Frame = 3
Query: 3 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGKSKRISARDFKVRDSGLRLAVSSSRPP-------QRFIASCDSPVTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCAPQVLVEEAGGVVLP---LDGTGEV 467
EF+KR G+F VMIGL VLGVVH P + KTYYA +G+GA+V + G +K+I A++F + D GL L S+S + F+ +SP +S GS+ LK + VA+G ++P L T EWDT A ++V+EAGGVVL + G GE+
Sbjct: 115 EFIKRNGEFTVMIGLVQGSAAVLGVVHVPV--SGKTYYAVAGKGAYVRDADGT---------TKQIHAKEFSMTDPGLVLVGSTSHANPSNNTAMRDFVELFESPTFNSYGSS-LKLLMVAEGDAHVYPRLAPTMEWDTAAADIIVKEAGGVVLQAGKITGKGEL 267
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Match: Hypothetical (protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F848_9VIRI) HSP 1 Score: 103 bits (257), Expect = 3.580e-21 Identity = 64/150 (42.67%), Postives = 85/150 (56.67%), Query Frame = 3
Query: 3 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGKSKRISARDFKVRDSGLRLAVSSSRP---PQRFIASCDSPVTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCAPQVLVEEAGGVVL 443
EF+KR G F V I L +PVLGVVH P QE T++A G+GAF G G+ ++ F D GL + S+S + FIA+ SP +S+GS+ LK + VA+G ++P L T EWDTCA Q++VEEAGG VL
Sbjct: 109 EFIKRNGQFTVNIALLRGERPVLGVVHTPCQEN--THWAEKGRGAFKRASKG--------GEDTKLECATFSEADEGLAVVASASHSNEATESFIAAFKSPTLTSMGSS-LKLMLVAEGKAHVYPRLAPTCEWDTCASQIVVEEAGGCVL 247
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Match: Hypothetical (protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QW77_DUNTE) HSP 1 Score: 102 bits (255), Expect = 1.150e-20 Identity = 63/150 (42.00%), Postives = 86/150 (57.33%), Query Frame = 3
Query: 3 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGKSKRISARDFKVRDSGLRLAVSSS---RPPQRFIASCDSPVTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCAPQVLVEEAGGVVL 443
EF+KR G+F V I L +G PVLGVVH P Q KTY+A G+GA++ + + A +F + D GLR+ SSS + + F++ DSP +GS+ LK + VA+G M+P L T EWDT A ++V EAGGVVL
Sbjct: 116 EFLKRNGEFTVNIALVTNGIPVLGVVHVPCQA--KTYWAVKGKGAWL----------QTSQTQTQFQAAEFGLDDPGLRIVASSSHLSKETEEFVSLFDSPEFVQVGSS-LKMIMVAEGLAHMYPRLAPTCEWDTAAADIIVREAGGVVL 252
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Match: 3'(2'),5'-bisphosphate (nucleotidase CysQ n=1 Tax=Thiothrix nivea TaxID=1031 RepID=A0A2G6HPT2_9GAMM) HSP 1 Score: 100 bits (250), Expect = 2.410e-20 Identity = 67/157 (42.68%), Postives = 91/157 (57.96%), Query Frame = 3
Query: 3 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGKSKRISARDFKVRDSGLRLAVSSSRPP-----QRFIASCDSPVTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCAPQVLVEEAGGVVLPLDGT 458
EF+K+ G+F+V+I L H PVLGVVHAPA T T+YA+ G GAF ++ GE + +VR++G L V+ SR + F+A S+GS LKA VADG D++P L TSEWDT A Q++VEEAGG ++ DG+
Sbjct: 95 EFIKKNGEFSVLIALIHHHHPVLGVVHAPAIAT--TWYASLGNGAF------KQTGEHIV---------PLRVREAGDTLTVAGSRSHAGDSLKAFLAQLGEYELVSMGSI-LKACLVADGRADIYPRLGLTSEWDTAAAQIIVEEAGGQMIQTDGS 233
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WUH9_9CHLO) HSP 1 Score: 101 bits (251), Expect = 5.280e-20 Identity = 66/159 (41.51%), Postives = 86/159 (54.09%), Query Frame = 3
Query: 3 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGKSKRISARDFKVRDSGLRLAVSSSRPP---QRFIASCDSPVTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCAPQVLVEEAGGVVLPL---DGTG 461
EF+KR G+F V I L F G PV GVVH P T KTY+A +GA+ G G +E R+ A F ++D GL + SSS P + I + P IGS+ LK + VA+G+ ++P L EWDT A ++V EAGGVVL DG G
Sbjct: 117 EFLKRNGEFTVNIALMFRGNPVFGVVHVPC--TGKTYWAVKDKGAWKRHGTGPGAPQE------RLQAASFGLKDPGLVIVGSSSHPSKATEELIELFNKPELMQIGSS-LKLLMVAEGSAHIYPRLVPCCEWDTAAADIIVREAGGVVLQAGLCDGEG 266
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H1W6_GONPE) HSP 1 Score: 98.2 bits (243), Expect = 4.700e-19 Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 3
Query: 3 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGKSKRISARDFKVRDSGLRLAVSSS---RPPQRFIASCDSPVTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCAPQVLVEEAGGVVL 443
EF+KR G F V I L +G P++GVV P Q KTY+A G+GA++ G G+R RI +F D GL++ S+S + + FI +P +GS+ LK + VA+G ++P L T EWDT A ++V EAGGVVL
Sbjct: 127 EFLKRNGQFTVNIALIANGAPIIGVVDVPCQG--KTYWAVKGKGAWLRTGEGQR----------RIQCAEFGFEDPGLKICASASHLNKETEEFIQLFKNPEFVQVGSS-LKLLMVAEGAAHIYPRLAPTCEWDTAAADIIVREAGGVVL 263
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Match: 3'(2'),5'-bisphosphate (nucleotidase CysQ n=1 Tax=Psychrosphaera sp. F3M07 TaxID=2841560 RepID=UPI001C087536) HSP 1 Score: 96.7 bits (239), Expect = 8.850e-19 Identity = 63/150 (42.00%), Postives = 89/150 (59.33%), Query Frame = 3
Query: 3 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGKSKRISARDFKVRDSGLRLAVSSSRPPQ---RFIASCDSPVTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCAPQVLVEEAGGVVL 443
EFV DFAV I L +GKPVLGV+HAP +T T++A SG GA + G K+K +SA +++ LR+A+S + + +FI + S+GSAALK+ VA+G D++ + T EWDT APQ++VEEAGG +L
Sbjct: 97 EFVAGRSDFAVNIALIENGKPVLGVIHAPVTKT--TFWAVSGLGAHKIFNG----------KTKSVSATPVDPKNAYLRVAISRVQKLETITKFIKPDIALEFVSMGSAALKSCLVAEGKADIYIRVGPTGEWDTGAPQIIVEEAGGCIL 234
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Match: 3'(2'),5'-bisphosphate (nucleotidase CysQ n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y5J6L5_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 1.340e-18 Identity = 61/150 (40.67%), Postives = 88/150 (58.67%), Query Frame = 3
Query: 3 EFVKRTGDFAVMIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGKSKRISARDFKVRDSGLRLAVSSSR---PPQRFIASCDSPVTSSIGSAALKAVAVADGTVDMFPCLYSTSEWDTCAPQVLVEEAGGVVL 443
EF+K+ G+FAV I L G+PVLGVV P + Y+A G+GA++ E G +K++ A F++ D GL++ S S Q ++A ++PV GSA LK + VA G V ++P + TSEWDT A Q++VEEAGG +L
Sbjct: 96 EFLKKNGEFAVNIALIEAGRPVLGVVFDPCVN--EIYWAVKGEGAWL----------ERNGHTKQLHAATFRMTDPGLKVTCSRSHLNEATQAYLAKLNAPVIIPKGSA-LKFLLVASGEVHLYPRIGQTSEWDTGAAQIIVEEAGGALL 232 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8005.16176.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8005.16176.1 >prot_E_fasciculatus_S2_contig8005.16176.1 ID=prot_E_fasciculatus_S2_contig8005.16176.1|Name=mRNA_E_fasciculatus_S2_contig8005.16176.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=221bp MIGLCFHGKPVLGVVHAPAQETPKTYYAASGQGAFVLEGGGERCGEEGLGback to top mRNA from alignment at E_fasciculatus_S2_contig8005:3759..6647- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8005.16176.1 ID=mRNA_E_fasciculatus_S2_contig8005.16176.1|Name=mRNA_E_fasciculatus_S2_contig8005.16176.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2889bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8005:3759..6647- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8005:3759..6647- >mRNA_E_fasciculatus_S2_contig8005.16176.1 ID=mRNA_E_fasciculatus_S2_contig8005.16176.1|Name=mRNA_E_fasciculatus_S2_contig8005.16176.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=663bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8005:3759..6647- (Ectocarpus fasciculatus EfasUO2)back to top |