mRNA_E_fasciculatus_S2_contig800.16165.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig800.16165.1 vs.
Match: FHA (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB0_9PHAE) HSP 1 Score: 345 bits (884), Expect = 6.410e-117 Identity = 196/241 (81.33%), Postives = 198/241 (82.16%), Query Frame = 1
Query: 76 MDTATSKDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREAQKPAXXXXXXVAAPRVTPTPAASTXXXXXXXXXXXXXXXXXXXXXXXX--AVLAPSATTVAA------PXXXXXXPAAVSFGDMVSHAFRSRELSAVASASGGLSSGDVQNWIMQA 774
MDTATSKDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREAQKPAXXXXXX AAPRVTP PAAST AV+APSATTVAA P PA VSFGDMV AFRSRELSAVA+ASGGLSSGDVQNWIMQA
Sbjct: 1 MDTATSKDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREAQKPAXXXXXXAAAPRVTPPPAASTPQGKPLDSRPAPPSSQGLPPENSVTTAVVAPSATTVAAXXAVANPAVPAPAPATVSFGDMVCQAFRSRELSAVAAASGGLSSGDVQNWIMQA 241
BLAST of mRNA_E_fasciculatus_S2_contig800.16165.1 vs.
Match: FHA (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX7_ECTSI) HSP 1 Score: 342 bits (877), Expect = 4.820e-115 Identity = 188/235 (80.00%), Postives = 191/235 (81.28%), Query Frame = 1
Query: 76 MDTATSKDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREAQKPAXXXXXXVAAPRVTPTPAASTXXXXXXXXXXXXXXXXXXXXXXXX--AVLAPSATTVAAPXXXXXXPAAVSFGDMVSHAFRSRELSAVASASGGLSSGDVQNWIMQA 774
M TATSKDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREAQKPA VAAPRVTP PAAS AV+APSATTVAA PA VSFGDM+S AFRSRELSAVA+ASGGLSSGDVQNWIMQA
Sbjct: 1 MATATSKDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREAQKPAPAPATAVAAPRVTPPPAASAPQAKPLESRPAPPSSQGLPPENSAPAAVVAPSATTVAA---AAPAPAPVSFGDMISQAFRSRELSAVAAASGGLSSGDVQNWIMQA 232
BLAST of mRNA_E_fasciculatus_S2_contig800.16165.1 vs.
Match: FHA (domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFJ7_PYTIN) HSP 1 Score: 92.0 bits (227), Expect = 1.440e-18 Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 106 PCAFAKLWGQL-DGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFL 432
P A+AKLWG++ + APF +T LP LGRG +T + I LG +KA+SR+HA I + ++++C+ KNG+ VAG Y AK +L S+ P+K+GPA +YFL
Sbjct: 21 PLAYAKLWGRVAEDAPFEMLITHLPVELGRGPLSTTPGPR----IALGEAKAISRQHARIQ---DKSCFELQCLGKNGISVAGKYIAKDNTVELSSKMPLKIGPARLYFL 123
BLAST of mRNA_E_fasciculatus_S2_contig800.16165.1 vs.
Match: FHA (domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GW45_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.280e-14 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 1
Query: 40 LSLSPSSEDTQRMDTATSKDDEPCAFAKLWGQL-DGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFL 432
L+++ ++D ++++ P A+AKL G+L D PF +TQLP LGRGS + G I LG ++SR HA I W + ++++C+ KN + VAG KG +L + P+K+G YFL
Sbjct: 19 LTMASVTDDEKKLEKEFLSKRPPLAYAKLQGKLNDTEPFEVVITQLPVELGRGSLENQ----PEGRICLGDQMSVSRTHARINWSAEKSCFELECLGKNPLYVAGRPVNKGTTVQLTPKLPLKIGSTRFYFL 146
BLAST of mRNA_E_fasciculatus_S2_contig800.16165.1 vs.
Match: Uncharacterized (protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IN48_PLABS) HSP 1 Score: 66.2 bits (160), Expect = 1.080e-8 Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 112 AFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVE-KLESRAPIKLGPASMYFLLPE 441
AFAKL G + F YVT+ TLGR + ++ + LG +K +SR HA I W P S+++ C+SKNG+ V G L SR I++GP +YFLLP+
Sbjct: 5 AFAKLLGDNN---FVHYVTKETLTLGRTAAQSD--------VVLGDNKNISRCHARIAWNPDTSSFELTCLSKNGVFVDGQLSGPSNPPVPLHSRTLIQIGPRLIYFLLPK 104
BLAST of mRNA_E_fasciculatus_S2_contig800.16165.1 vs.
Match: Uncharacterized (protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NZQ4_CONC2) HSP 1 Score: 62.4 bits (150), Expect = 1.700e-7 Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 88 TSKDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPE 441
TS +P A + + +L+G Y+ +L T+GR + +DLG +KA+SR+HA I + + +++ KNG+V+ ++ KG KLE + I++G + YFLLP+
Sbjct: 12 TSPSKQP-AHVQAYAKLEGDDVCYYMKELHITIGRKINPQDDIN-----VDLGPTKAISRQHAKIYYNLVDQKFELSVQGKNGVVIDDVFYKKGSNIKLEHGSKIQIGNQTFYFLLPK 123 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig800.16165.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig800.16165.1 >prot_E_fasciculatus_S2_contig800.16165.1 ID=prot_E_fasciculatus_S2_contig800.16165.1|Name=mRNA_E_fasciculatus_S2_contig800.16165.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=259bp LSQVATLHCSLGSLSLSPSSEDTQRMDTATSKDDEPCAFAKLWGQLDGAPback to top mRNA from alignment at E_fasciculatus_S2_contig800:192..3710- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig800.16165.1 ID=mRNA_E_fasciculatus_S2_contig800.16165.1|Name=mRNA_E_fasciculatus_S2_contig800.16165.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3519bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig800:192..3710- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig800:192..3710- >mRNA_E_fasciculatus_S2_contig800.16165.1 ID=mRNA_E_fasciculatus_S2_contig800.16165.1|Name=mRNA_E_fasciculatus_S2_contig800.16165.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=777bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig800:192..3710- (Ectocarpus fasciculatus EfasUO2)back to top |