mRNA_E_fasciculatus_S2_contig7996.16144.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL04_ECTSI) HSP 1 Score: 523 bits (1348), Expect = 5.220e-182 Identity = 267/301 (88.70%), Postives = 276/301 (91.69%), Query Frame = 1
Query: 1 SGVMGGDNERPEAGTAPSWLSQEQQQLGHDPSQQPHGEADTPSSSWASGSRAK-AGPASAGLPSRCFQAIEAHSAGVNGVVFEKGGVLLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTCREQARLTGHQQKVCAVSFCDAGQRLVTGSQDCSIKVWDLHRGQWNAVTTAMRATSKCNAVDVSHSWKDSKGNNAVVVSGHMDGSVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRGNLLLTNSKDSSLKVVDARMYQMVACLTHPKFRTT 900
SGVMGGDNERPEAGTAP+WLSQEQQ +G DPSQQP GE D P+SSWASG R K AGPAS GLPSRCFQAIEAHS+GVNGVVFEKGGVLLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRT REQARLTGHQQKVCAVSFCD GQRLVTGSQDCSIKVWDLHRGQWNA+TTAMRATSKCNAVDVSHSWKDSKG NAVVVSGHMDG+VRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGR NLLLTNSKDSSLKV + V C + +RTT
Sbjct: 183 SGVMGGDNERPEAGTAPAWLSQEQQ-VGDDPSQQPQGEGDMPASSWASGLRKKNAGPASTGLPSRCFQAIEAHSSGVNGVVFEKGGVLLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTSREQARLTGHQQKVCAVSFCDTGQRLVTGSQDCSIKVWDLHRGQWNAMTTAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMDGAVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRANLLLTNSKDSSLKV-----RRSVKCCSGIAWRTT 477
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSX3_9STRA) HSP 1 Score: 191 bits (485), Expect = 2.050e-53 Identity = 110/258 (42.64%), Postives = 148/258 (57.36%), Query Frame = 1
Query: 181 LPSRCFQAIEAHSAGVNGVVFEK-GGVLLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTCREQARLTGHQQKVCAVSFCDAGQRLVTGSQDCSIKVWDLHRGQWNAVTTAMRATSKCNAVDVSHSWKDSKGNNAVVVSGHMDGSVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRGNLLLTNSKDSSLKVVDARMYQMVACLTHPKFRTTSSFSRACFSPSAAYAAA 951
+P+ I+AHS+ V V ++ G L+AT+ +DS V+VWD SG RA L+G + AM+ DI G LV G ASD SC VW L T R +L GH KV G+ ++T S D SIK+WD+ R + TT +R +S N +DVS+ K VVSGHMDG VR WD+RSG +++ LHT VT P G +LTN +DS LK+VD RM +++ +TH FRT ++S +SP YAAA
Sbjct: 76 IPTEAKHVIQAHSSEVTSVRYDGVGSDLVATSSNDSTVRVWDTSSGAMRATLRGGSGH---AMMGCDIVGGLVVGCASDKSCRVWKLSTQRMIHQLVGHGNKVTCARLISGGKEVLTASADRSIKLWDISRNTYRQTTT-LRHSSTANCLDVSYDTK-------TVVSGHMDGGVRFWDIRSGEKTAEIETLHTGGVTCAHLHPTNGTQILTNGRDSVLKLVDIRMGSVISTMTHKDFRTPFNWSACSYSPDGVYAAA 322
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGS3_9STRA) HSP 1 Score: 181 bits (460), Expect = 4.790e-48 Identity = 106/258 (41.09%), Postives = 143/258 (55.43%), Query Frame = 1
Query: 184 PSRCFQAIEAHSAGVNGVVFEKGGV-LLATAGDDSYVKVWDPGSGRQRAALKGA-AHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTCREQARLTGHQQKVCAVSFCDAGQRLVTGSQDCSIKVWDLHRGQWNAVTTAMRATSKCNAVDVSHSWKDSKGNNAVVVSGHMDGSVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRGNLLLTNSKDSSLKVVDARMYQMVACLTHPKFRTTSSFSRACFSPSAAYAAA 951
PS I+AH V ++ G L+ATA DS VK+WD +G+ RA L+G H M+ VDI G L G SD +C VW+LRT R +L GH K+ V + ++TGS D S+KVWD+ R + TT +R +S N+VDVS S VSGHMDG +R WD+RSG ++ LH VTSV+F+P +LTN +DS+LK+VD R + HP+FRT +++ SP YAAA
Sbjct: 271 PSEPKHIIQAHPQEATAVKYDGTGTDLVATASSDSNVKIWDTSNGQVRATLRGGNGHP----MLGVDISGGLAVGCGSDKTCRVWNLRTQRMIHQLAGHSHKITCVRLFHTEKEIITGSADRSLKVWDITRSTYRQTTT-LRHSSTSNSVDVSSDAMTS-------VSGHMDGGIRFWDVRSGERTLDIQSLHQGGVTSVQFSPNNSTQILTNGRDSTLKLVDMRTCATLQVFQHPEFRTLLNYASCSLSPDGMYAAA 516
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAH2_TRICV) HSP 1 Score: 176 bits (446), Expect = 4.790e-46 Identity = 104/251 (41.43%), Postives = 142/251 (56.57%), Query Frame = 1
Query: 205 IEAHSAGVNGVVFEKGGV-LLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTCREQARLTGHQQKVCAVSFCDAGQRLVTGSQDCSIKVWDLHRGQWNAVTTAMRATSKCNAVDVSHSWKDSKGNNAV-VVSGHMDGSVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRGNLLLTNSKDSSLKVVDARMYQMVACLTHPKFRTTSSFSRACFSPSAAYAAA 951
++AH+ V ++ G L+ATA DS VK+WD GSG+ RA L+G + M+ VDI G L G SD +C VW+LRT R +L GH QK+ + ++TGS D S+KVWD+ R + TT MR +S N++DVS N+AV VVSGHMDG +R WDMR+ + LH +TSV F+P LLT+ +DS+LK+VD R + H FRT +++ SP YAAA
Sbjct: 279 LQAHAQEATAVRYDGTGTDLVATASSDSTVKIWDTGSGQVRATLRGGSGY---PMLGVDISGGLAVGCGSDKTCRVWNLRTQRMIHQLAGHSQKITCCRLFQNEKGVITGSADRSLKVWDISRSTYRQTTT-MRHSSTSNSLDVS--------NDAVTVVSGHMDGGLRFWDMRTADRTADISSLHEGGITSVYFSPSNNTHLLTSGRDSTLKLVDMRTCTTLQTFFHGDFRTLVNYASCSLSPDGVYAAA 517
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT70_HETAK) HSP 1 Score: 162 bits (410), Expect = 3.840e-44 Identity = 92/270 (34.07%), Postives = 139/270 (51.48%), Query Frame = 1
Query: 400 GGASDGSCTVWSLRTCREQARLTGHQQKVCAVSFCDAGQRLVTGSQDCSIKVWDLHRGQWNAVTTAMRATSKCNAVDVSHSWKDSKGNNAVVVSGHMDGSVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRGNLLLTNSKDSSLKVVDARMYQMVACLTHPKFRTTSSFSRACFSPSAAYAAAXXXXXXXXXXDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVVTVLQTHGVPASGCDWCLNMPSTLLIASCDSKGGLRVW 1209
G ++D + VWS + R L GH ++ AV + ++T S D +KVWD+ R + A TT +RATS CNA DV+ + A V++GH DG +R WD+RSG+ + +K LH +TSV ++P + +LTNS+D++LK+VDAR Y+++ ++HP +RT+ ++SR FSP+ AYAAA D+ SV T+L H S C W S+ + SCD +G L +W
Sbjct: 2 GASTDRTGFVWSAASGRRAHHLQGHGARLHAVRLFPGARTVLTASGDRCVKVWDIAR-EMCACTTTLRATSSCNAADVAP-------DGAAVLTGHQDGGLRFWDVRSGAKVNDIKSLHQSQITSVMYSPDNASTILTNSRDNTLKLVDARTYEVITTMSHPSYRTSYNWSRTTFSPNGAYAAAGSGDGSVFVFDVYD-------------------------------GSVKTILTHHRSAVSSCYW-----SSSQLMSCDREGFLTLW 227
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y1Y4_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.310e-43 Identity = 92/234 (39.32%), Postives = 129/234 (55.13%), Query Frame = 1
Query: 250 GGVLLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTCREQARLTGHQQKVCAVSFCDAGQRLVTGSQDCSIKVWDLHRGQWNAVTTAMRATSKCNAVDVSHSWKDSKGNNAVVVSGHMDGSVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRGNLLLTNSKDSSLKVVDARMYQMVACLTHPKFRTTSSFSRACFSPSAAYAAA 951
G L+ TAG DS VKVWD SG R L G+ M+ D++G +V G +SD +C VW++RT R L GHQ K+ C G+ ++TGS D S+KVWD+ R + TT +R S + +DV ++ VSGHMDG +R WD+R+G +++ +H + SV+F+P +LTN DS +K+VD R V H +F T +FS A SP YAAA
Sbjct: 296 GNDLVVTAGSDSSVKVWDTNSGSARVTLHGSPGH---TMMACDMYGSVVIGASSDKTCRVWNMRTERMLHHLVGHQHKISCARLCAQGEAVLTGSADRSLKVWDISRQTYKQTTT-LRHGSTAHCLDVG-------SDSFSAVSGHMDGGLRFWDLRTGDRTTEIREMHDGGICSVQFSPVSSTQVLTNGLDSCVKLVDIRTGTAVHTFRHAEFSTVQAFSAAVLSPDGKYAAA 518
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Match: Uncharacterized (protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI13_FISSO) HSP 1 Score: 155 bits (391), Expect = 1.830e-38 Identity = 90/234 (38.46%), Postives = 128/234 (54.70%), Query Frame = 1
Query: 250 GGVLLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTCREQARLTGHQQKVCAVSFCDAGQRLVTGSQDCSIKVWDLHRGQWNAVTTAMRATSKCNAVDVSHSWKDSKGNNAVVVSGHMDGSVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRGNLLLTNSKDSSLKVVDARMYQMVACLTHPKFRTTSSFSRACFSPSAAYAAA 951
G L+AT G DS VKVWD G+G RA L G+ +++ D++ +LV G ++D +C VW++RT R L GHQ KV V + + ++T S D SIKVWD++R + TT +R +S N +D++ + + SGHMDG+VR WD+RSGS LH VTS+ F +LTN DS LK++D R + H F T+ S+S SP +A A
Sbjct: 265 GNDLVATCGMDSTVKVWDAGTGALRATLHGSTSY---PILSCDVYDNLVAGASTDKTCRVWNVRTQRMLHHLVGHQHKVNCVRLNGSEKSVITASSDRSIKVWDINRTTYRQSTT-LRHSSTTNCLDIA-------SDPNTLCSGHMDGAVRGWDLRSGSRCFDFTELHGGGVTSIHFNLANSTEVLTNGLDSCLKLIDVRTGMPLQTFRHKDFVTSQSWSSGVLSPDGKFAVA 487
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Match: ATG16 (domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A5I5_DICPU) HSP 1 Score: 146 bits (368), Expect = 5.030e-35 Identity = 88/257 (34.24%), Postives = 139/257 (54.09%), Query Frame = 1
Query: 181 LPSRCFQAIEAHSAGVNGVVFEKGGVLLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTCREQARLTGHQQKVCAVSFCDAGQRLVTGSQDCSIKVWDLHRGQWNAVTTAMRATSKCNAVDVSHSWKDSKGNNAVVVSGHMDGSVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRGNLLLTNSKDSSLKVVDARMYQMVACLTHPKFRTTSSFSRACFSPSAAYAAA 951
LPS+ + AH++ + + F G L+A+ G D VKVWD SG+ +A L GA+ M+ + + + V G ++D S +WS R + LTGH KV F + R+VTGS D +IK+WDL +G T + S CN + + GN+ +VSGH+D SVR WD G H L +H +TS+ +P + +LTNS+D +LK++D R ++ + ++R ++++A +SP AY A+
Sbjct: 296 LPSKAKRRWTAHNSEIYCIAFNTMGNLMASGGGDKAVKVWDIISGQTKATLLGASQSIMS--VEFSPNDETVLGTSNDNSARLWSTELGRSRHTLTGHIGKVYTGKFFNPN-RVVTGSHDRTIKLWDLQKGY---CTRTIFCFSSCNDLAI----LGGTGNH--LVSGHVDHSVRFWDSNIGEPTHVLSSIHEGQITSITNSPVNSHHILTNSRDHTLKIIDTRTFETIRTFKDQEYRNGLNWTKAAWSPDGAYIAS 540
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Match: Hypothetical (protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HHW2_9STRA) HSP 1 Score: 145 bits (367), Expect = 7.590e-35 Identity = 95/258 (36.82%), Postives = 132/258 (51.16%), Query Frame = 1
Query: 181 LPSRCFQAIEAHSAGVNGVVFEKGGV-LLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTCREQARLTGHQQKVCAVSFCDAGQRLVTGSQDCSIKVWDLHRGQWNAVTTAMRATSKCNAVDVSHSWKDSKGNNAVVVSGHMDGSVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRGNLLLTNSKDSSLKVVDARMYQMVACLTHPKFRTTSSFSRACFSPSAAYAAA 951
LP+ I+AH V ++ G+ L+AT DS VKVWD +G+ +A L+G + M+ VD+ G LV G +D +C VW++RT R +L GH KV V + + ++TGS D SIKVWD+ R + TT R +S N +DVS ++ V +RSG + +H VTSV+ P GN +LTN +DS L+VVD R V L H FRT ++S SP AYA A
Sbjct: 304 LPTTPKHVIQAHPIEATSVRYDGTGLDLIATGSSDSTVKVWDTNNGQVKATLRGGSGH---PMLGVDLSGGLVVGCGADKTCRVWNIRTQRMIHQLAGHSTKVTCVRLLNNEKGVITGSADRSIKVWDISRSTYKQTTT-FRHSSTSNCMDVSL-------DSLTVFXXXXXXXXXXXXVRSGKRVLDVLSMHEGGVTSVQCHPMNGNQILTNGRDSVLRVVDVRTCTAVQSLGHEDFRTAFNYSSCGISPDGAYALA 550
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Match: Protein (tipD n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=TIPD_DICDI) HSP 1 Score: 145 bits (365), Expect = 1.480e-34 Identity = 84/257 (32.68%), Postives = 138/257 (53.70%), Query Frame = 1
Query: 181 LPSRCFQAIEAHSAGVNGVVFEKGGVLLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTCREQARLTGHQQKVCAVSFCDAGQRLVTGSQDCSIKVWDLHRGQWNAVTTAMRATSKCNAVDVSHSWKDSKGNNAVVVSGHMDGSVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRGNLLLTNSKDSSLKVVDARMYQMVACLTHPKFRTTSSFSRACFSPSAAYAAA 951
LPS+ + H++ + + F G LLAT G D VKVWD SG+Q++ L GA+ ++ ++ + + + G ++D S +W+ R + LTGH KV F ++ R+VTGS D +IK+WDL +G T + S CN + + G+ + SGH+D SVR WD +G L +H +TS+ +P N +LTNS+D +LK++D R + + P++R ++++A +SP Y A+
Sbjct: 312 LPSKAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVS--VSFSPNDESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINSN-RVVTGSHDRTIKLWDLQKGY---CTRTIFCFSSCNDLVI------LGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGLNWTKASWSPDGRYIAS 556 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7996.16144.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7996.16144.1 >prot_E_fasciculatus_S2_contig7996.16144.1 ID=prot_E_fasciculatus_S2_contig7996.16144.1|Name=mRNA_E_fasciculatus_S2_contig7996.16144.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=402bp MGGDNERPEAGTAPSWLSQEQQQLGHDPSQQPHGEADTPSSSWASGSRAKback to top mRNA from alignment at E_fasciculatus_S2_contig7996:139..4901+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7996.16144.1 ID=mRNA_E_fasciculatus_S2_contig7996.16144.1|Name=mRNA_E_fasciculatus_S2_contig7996.16144.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4763bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7996:139..4901+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7996:139..4901+ >mRNA_E_fasciculatus_S2_contig7996.16144.1 ID=mRNA_E_fasciculatus_S2_contig7996.16144.1|Name=mRNA_E_fasciculatus_S2_contig7996.16144.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1206bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7996:139..4901+ (Ectocarpus fasciculatus EfasUO2)back to top |