mRNA_E_fasciculatus_S2_contig7978.16132.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV7_ECTSI) HSP 1 Score: 281 bits (719), Expect = 1.470e-82 Identity = 144/150 (96.00%), Postives = 147/150 (98.00%), Query Frame = 3
Query: 3 LESVGAGGMDVSSADGVSMLGGGPSGLRGADTPDAKKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQKSQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFVGFVG 452
LESVGAGGMD SS+DGVS+LGGG SG+RGADTPDAKKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQK QSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFVGFVG
Sbjct: 610 LESVGAGGMDASSSDGVSILGGGSSGMRGADTPDAKKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQKPQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFVGFVG 759
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YG22_HETAK) HSP 1 Score: 109 bits (272), Expect = 3.250e-23 Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 3
Query: 75 SGLRGADTPDAKKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQKSQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFVG 443
S L G+ D+ K + RLKEM+KE+I +R+ VYLL GY++D+ R LRLRSM+AE ESD L+FQ GGLEL ET A + K+ +YL +C+S+PAFLS++T LFE QTF G
Sbjct: 151 SRLEGSSGVDSSKLNQRLKEMFKEQIARFREAVYLLFGYKLDMGGAHARPKLRLRSMFAENESDDLLFQWGK----GGLELCETDFATKIDRKVFVYLHQCNSVPAFLSNVTLNLFEAQTFQG 269
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Match: Hypothetical (protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PFY6_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.030e-20 Identity = 57/118 (48.31%), Postives = 83/118 (70.34%), Query Frame = 3
Query: 87 GADTPDAKKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQKSQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFV 440
G++ D K RLKE++K++ +R+ VYLLTG+ ID+ +D Q LR+RSM+AE+E D L+F+ + EGG L L+ET + + I YL+KC+S+PAFLS+LT +LFEKQTF+
Sbjct: 323 GSNQQDLGKRHERLKELFKQKTKAFREAVYLLTGFMIDMTQDQNPQ-LRVRSMFAEREDDHLLFKWQPDVEGG-LHLLETDFCSRIDENIFAYLKKCNSVPAFLSTLTLDLFEKQTFL 438
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB74_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.420e-19 Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = 3
Query: 108 KKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQ--MLRLRSMYAEQESDCLVFQQKSQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQT 434
+K +VRLKE++K RI+ +R VYLLTGY++D++ + L LRSMYAE+E D L+ Q K GGLEL+ET + K+ YL C SIPAFLSSLT +LF++QT
Sbjct: 50 RKKNVRLKEVFKVRIDKFRNAVYLLTGYKVDMVAGSAGKDDKLYLRSMYAEREDDHLLMQMKK----GGLELLETEFCKRIDPKMFAYLTTCHSIPAFLSSLTLDLFDRQT 156
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B946_HYAAE) HSP 1 Score: 101 bits (251), Expect = 7.240e-19 Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = 3
Query: 93 DTPDA-KKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQKSQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFVG 443
DT D KK + RLK+++ ++I YR+ VYLLTGY++DL K +MLRLRSMYAE + D L+ + ++ G LEL+++ + ++ YL C S PAFLS+LT LFEKQTF G
Sbjct: 633 DTVDGLKKLNQRLKQVFGDQIRQYREAVYLLTGYKVDLKKSNGMEMLRLRSMYAEHDDDDLLIRMEA---SGSLELLDSDFCSRINQRVFAYLTTCRSFPAFLSTLTLHLFEKQTFQG 747
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Match: Mitotic (spindle assembly checkpoint MAD1-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IHR3_PARCT) HSP 1 Score: 97.8 bits (242), Expect = 9.960e-19 Identity = 54/115 (46.96%), Postives = 79/115 (68.70%), Query Frame = 3
Query: 90 ADTPDAKKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQKSQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQT 434
A A++ + RLKE++ ++I +R+ Y LTGYRID+++D Q +L+SMYAE+ SDCL+FQ + G L+ET ++Q I+ YL +C+SIPAFLSS+T ELFE+QT
Sbjct: 217 AQVSSAERKNKRLKEVFAQKIQEFREACYSLTGYRIDVVQD---QQYKLKSMYAERSSDCLLFQCNA---NGKTMLLETDFSLQVKSLIDQYLIQCNSIPAFLSSVTLELFERQT 325
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJQ4_GLOUD) HSP 1 Score: 100 bits (248), Expect = 1.730e-18 Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = 3
Query: 108 KKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQKSQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFVG 443
K + RLKE+++E+I YR+ VYLLTGY++DL K ++LRLRS+YA+ + D L+ + ++ G LEL+ET Q ++ YL C S PAFL++LT LFEKQTF G
Sbjct: 653 KLLNKRLKEVFREQIQQYREAVYLLTGYKVDLKKSNGMELLRLRSVYADHDDDELLVRMEAD---GALELLETDFCAQINQRVFAYLTTCRSFPAFLATLTLHLFEKQTFQG 761
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Match: MAD1L1 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VSB4_SYMMI) HSP 1 Score: 95.5 bits (236), Expect = 2.790e-18 Identity = 56/121 (46.28%), Postives = 78/121 (64.46%), Query Frame = 3
Query: 102 DAKKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMK-------DPTRQMLRLRSMYAEQESDCLVFQQKSQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFVG 443
D+ K + RLKEM++ERIN YR+ VYLL GY+++L P Q L+LRSMYAE D LVFQ K G LEL+ETP A + + L+ +++P FL++++ +LFEKQTF+G
Sbjct: 165 DSNKMNARLKEMFRERINSYREAVYLLFGYKVELYSADVAGGGSPYPQ-LKLRSMYAESPDDSLVFQMK----GDILELMETPFATGLDESLLHTLQTSNAVPVFLANVSLDLFEKQTFMG 280
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFY8_BRELC) HSP 1 Score: 99.4 bits (246), Expect = 2.900e-18 Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 3
Query: 108 KKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQKSQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFVG 443
KK + RLK+++ ++I YR+ VYLLTGY++DL K +MLRLRS+YAE + D L+ + ++ G LEL+E+ Q ++ YL C S PAFLS+LT LFEKQTF G
Sbjct: 609 KKLNQRLKQVFGDQIRQYREAVYLLTGYKVDLRKSNGIEMLRLRSVYAEHDDDELLVRMEAD---GSLELLESDFCSQINQRVFAYLTACRSFPAFLSTLTLHLFEKQTFQG 717
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Match: Uncharacterized (protein n=46 Tax=Phytophthora TaxID=4783 RepID=W2RBQ8_PHYPN) HSP 1 Score: 99.4 bits (246), Expect = 2.990e-18 Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = 3
Query: 108 KKFSVRLKEMYKERINFYRQMVYLLTGYRIDLMKDPTRQMLRLRSMYAEQESDCLVFQQKSQSEGGGLELVETPLAVQHMDKINMYLRKCDSIPAFLSSLTAELFEKQTFVG 443
KK + RLK+++ ++I YR+ VYLLTGY++DL K ++LRLRS+YAE + D L+ + +S G LEL+++ Q ++ YL C S PAFLS+LT LFEKQTF G
Sbjct: 633 KKLNQRLKQVFGDQIRQYREAVYLLTGYKVDLRKSNGMELLRLRSVYAEHDDDELLVRMES---NGSLELLDSEFCSQINQRVFAYLTTCRSFPAFLSTLTLHLFEKQTFQG 741 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7978.16132.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7978.16132.1 >prot_E_fasciculatus_S2_contig7978.16132.1 ID=prot_E_fasciculatus_S2_contig7978.16132.1|Name=mRNA_E_fasciculatus_S2_contig7978.16132.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=143bp MDVSSADGVSMLGGGPSGLRGADTPDAKKFSVRLKEMYKERINFYRQMVYback to top mRNA from alignment at E_fasciculatus_S2_contig7978:3724..6795- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7978.16132.1 ID=mRNA_E_fasciculatus_S2_contig7978.16132.1|Name=mRNA_E_fasciculatus_S2_contig7978.16132.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3072bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7978:3724..6795- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7978:3724..6795- >mRNA_E_fasciculatus_S2_contig7978.16132.1 ID=mRNA_E_fasciculatus_S2_contig7978.16132.1|Name=mRNA_E_fasciculatus_S2_contig7978.16132.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=429bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7978:3724..6795- (Ectocarpus fasciculatus EfasUO2)back to top |