mRNA_E_fasciculatus_S2_contig7978.16131.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE56_9PHAE) HSP 1 Score: 417 bits (1073), Expect = 2.330e-142 Identity = 210/228 (92.11%), Postives = 215/228 (94.30%), Query Frame = 1
Query: 1 IERTP-ASTAAAAARRAPEEGEQVFSLYGHGDGDSSIDTEPLAPPIELSGSVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALLE 681
+ERTP A+T RRAPEE EQVFSLYG DGDS++D E LAPPIELSG+VLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPK IAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGG VFGALLE
Sbjct: 47 MERTPPATTXXXXVRRAPEEDEQVFSLYGRSDGDSNVDAERLAPPIELSGNVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKSIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGGVFGALLE 274
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Match: Indole (2,3-dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY0_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.220e-65 Identity = 111/189 (58.73%), Postives = 131/189 (69.31%), Query Frame = 1
Query: 115 EPLAPPIELSGSVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALLE 681
EP P + LS L LL+ F+VDPVRGFLP DPL RLPQ ELQPWE + + LP+LL+ QAR PL LP L I +L + +R RALLLL + HA VWG P +P +P GIAVPL LAA G+PP++TH SLVL+NW RLDP G L NLA C FLGG DE WFY++TVEIEARGG ALL+
Sbjct: 39 EPRCPLVPLSPDTLQLLEKFEVDPVRGFLPSEDPLLRLPQPELQPWEDLVSDLPALLSAAQARLPLSRLPILPITLLETEPQRRRALLLLSMLCHAFVWGEPARPADALPPGIAVPLWRLAADMGVPPVMTHLSLVLYNWRRLDPRGALDATNLAAACQFLGGHDEAWFYLTTVEIEARGGPAMAALLQ 227
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SH81_9ARCH) HSP 1 Score: 166 bits (420), Expect = 2.590e-46 Identity = 89/172 (51.74%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 151 VLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLA--VGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGS 660
+ A+L FDVDP+ GFLP DPL+RLP WE +A LP LL +GQAR PLE+LP L D L + RA LLLC+FAHA +WG P IP+GIAVPL ++ G+PP+L H S+VL+NW RLD G + ENL+ +F G DE+WFY+ TVEIEARG +
Sbjct: 126 IRAILKKFDVDPITGFLPTEDPLQRLPYARYHLWEDLADDLPKLLGARLGQARCPLEQLPVLPTDKLITDADLRRAHLLLCLFAHAYIWGG-NTPLDRIPQGIAVPLWEVSEKLGVPPVLGHPSIVLYNWRRLDVNGDICMENLSTLNNFFDGRDESWFYLITVEIEARGAA 296
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Match: Uncharacterized (protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523E1X2_9BACT) HSP 1 Score: 158 bits (399), Expect = 5.040e-43 Identity = 82/178 (46.07%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 148 SVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALLE 681
S+ L ++VDP RGFLP DPL RLP WEA+A+ + LL G+ R+ LE+LPE+ +DVL + E RA+LLLC+F +A VWG E+P G +P+ +AVP +A G PP++ H S+VL NW R+DP GPL +NLA GG DE WFY+ +EARG A+++
Sbjct: 2 SIAEELARYEVDPGRGFLPSCDPLARLPAA-FDAWEAVASQVSELLLAGRLREALEQLPEVDLDVLGRRDELERAMLLLCIFGNAYVWGA-EEPAGALPRAVAVPWCEVADKLGRPPIIAHASIVLRNWRRIDPEGPLTLDNLATLQTMGGGGDEQWFYLIPAAMEARGAEGLIAMMQ 177
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Match: Uncharacterized (protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7X5T9_9CHLR) HSP 1 Score: 158 bits (399), Expect = 6.520e-43 Identity = 87/186 (46.77%), Postives = 110/186 (59.14%), Query Frame = 1
Query: 130 PIELSGSVLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQAR--KPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALLE 681
P + + VL L + V RGFLP DPL LPQ WE ++ LP LLA G A + + LP L + L + RA++LL V AHA VW +PEQP+ +P IA+PL ALAA G PPL TH + VLHNW RLDP GP+ N+A C F GGLDE WF++ +E+EARG A L+
Sbjct: 2 PKQRAPFVLPDLAQWQVHAERGFLPDPDPLLELPQAYAA-WERISRELPGLLAAGSAALLRQVSALPTLELSGLQTAPMQNRAMILLTVLAHAFVWADPEQPRKLLPAAIALPLGALAAQLGRPPLCTHATTVLHNWRRLDPDGPIALGNVATLCGFFGGLDEAWFFLVALEVEARGAPAVVASLQ 186
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E7A194_9BACT) HSP 1 Score: 151 bits (382), Expect = 1.560e-40 Identity = 81/172 (47.09%), Postives = 105/172 (61.05%), Query Frame = 1
Query: 163 LDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALL 678
L DVDP+RGFLP DPL+RLP R + PWE +A LP+L++ R +EELP L D L + E RA+LLL V A W PE P +P+ I++P + +A P +++H S+VLHNW R+DPAG + +NL F GG DE WFY+ TVEIEARG LL
Sbjct: 9 LAEHDVDPIRGFLPGEDPLQRLPARYV-PWERLAFDLPALVSTHLLRDAIEELPLLDTDALESEAELRRAMLLLSVLGGACAWSRPEPPT-RLPRSISIPWSEVAERLDRPMIISHASIVLHNWRRIDPAGEIVAKNLRTLQCFRGGPDEEWFYLVTVEIEARGARALPLLL 178
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fraserbacteria sp. (strain RBG_16_55_9) TaxID=1817864 RepID=A0A1F5V0E2_FRAXR) HSP 1 Score: 150 bits (379), Expect = 3.280e-40 Identity = 81/164 (49.39%), Postives = 107/164 (65.24%), Query Frame = 1
Query: 187 VRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGALL 678
+RGFLP DPL +LP R + W+++ A L +LL G+ R+ LE LP LSI+ L +R RA+L+L V A+A VW + + P IPK IAVPL LA G PP+ T+ S+VL+NW RLD A + NLAC F+GGLDE WFY+ +VEIEA+G AL+
Sbjct: 1 MRGFLPTQDPLEKLP-RFYEVWDSLGADLAALLMTGRLRRALERLPLLSIEKLRNGGQRERAILILSVLANAYVWADAK-PATRIPKSIAVPLCQLAGLVGRPPITTYASIVLNNWRRLDEAESIELSNLACRQLFVGGLDEQWFYLISVEIEAKGAPALSALV 162
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5B492_9BACT) HSP 1 Score: 148 bits (374), Expect = 2.350e-39 Identity = 83/175 (47.43%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 151 VLALLDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQARKPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARGGSVFGAL 675
V+ L +FDVDPVRGFLP VDP RLP PWE +A LP+LL+ G AR + LP L D L R RA+LLL VFA ASV+G E + +P + +P ++ G P ++ H S+VLHNW RLD GP+ +NL F GG DE WFY+ T EIEA G + AL
Sbjct: 6 VIDALRTFDVDPVRGFLPAVDPETRLPA-PFAPWEQLAVDLPALLSTGVARDAVAGLPLLDADSLGSTRSLQRAMLLLSVFASASVFGGAEA-EHRLPPNLCLPWKKVSGRLGRPMIIAHASIVLHNWRRLDMHGPIAADNLRALQCFRGGPDEEWFYLLTAEIEATGAAAIPAL 178
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7XP59_9CHLR) HSP 1 Score: 147 bits (372), Expect = 6.130e-39 Identity = 79/166 (47.59%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 163 LDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQAR--KPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARG 654
L ++V RGFLP DPL LP E W+ + LP LLA G A + + LP L + L RA++LL V AHA VW +P+QP+ +P IA+PL LAA G PPL TH + VLHNW RLDP GP+ N+A F GGLDE WF + T+E+EARG
Sbjct: 13 LAQWEVHAQRGFLPDPDPLLELPP-EYAAWDRINRELPGLLAAGSAAVVRSVSRLPTLELAGLQTAAMHNRAMVLLSVLAHAFVWADPQQPRRLLPAAIALPLGTLAAQLGRPPLCTHATTVLHNWRRLDPDGPIELGNVATLAGFFGGLDEAWFLLVTLEVEARG 177
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Match: Indoleamine (2,3-dioxygenase 2 n=3 Tax=Anaerolineae TaxID=292625 RepID=A0A388Q5D8_9CHLR) HSP 1 Score: 145 bits (366), Expect = 4.650e-38 Identity = 77/166 (46.39%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 163 LDSFDVDPVRGFLPPVDPLRRLPQRELQPWEAMAAALPSLLAVGQAR--KPLEELPELSIDVLTCQRERMRALLLLCVFAHASVWGNPEQPQGTIPKGIAVPLAALAAAEGMPPLLTHTSLVLHNWHRLDPAGPLRTENLACNCHFLGGLDETWFYISTVEIEARG 654
L ++V RGFLP DPL LP E WE + LP LLA G + + LP L + L RA++LL V AHA VW +P+QP+ +P IA+PL LAA G PP+ TH + VLHNW RLDP+GP+ N+A F GGLDE WF++ T+ +EARG
Sbjct: 13 LAQWEVHAERGFLPDPDPLLELPP-EYAAWERINRELPGLLAAGSGAMLRSVGRLPVLELAGLQTAPMHNRAMVLLSVLAHAFVWADPQQPRKQLPAAIALPLGTLAAQLGRPPICTHATTVLHNWRRLDPSGPIELGNVATLAGFFGGLDEAWFFLVTLAVEARG 177 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7978.16131.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7978.16131.1 >prot_E_fasciculatus_S2_contig7978.16131.1 ID=prot_E_fasciculatus_S2_contig7978.16131.1|Name=mRNA_E_fasciculatus_S2_contig7978.16131.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=227bp IERTPASTAAAAARRAPEEGEQVFSLYGHGDGDSSIDTEPLAPPIELSGSback to top mRNA from alignment at E_fasciculatus_S2_contig7978:492..3188- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7978.16131.1 ID=mRNA_E_fasciculatus_S2_contig7978.16131.1|Name=mRNA_E_fasciculatus_S2_contig7978.16131.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2697bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7978:492..3188- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7978:492..3188- >mRNA_E_fasciculatus_S2_contig7978.16131.1 ID=mRNA_E_fasciculatus_S2_contig7978.16131.1|Name=mRNA_E_fasciculatus_S2_contig7978.16131.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=681bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7978:492..3188- (Ectocarpus fasciculatus EfasUO2)back to top |