mRNA_E_fasciculatus_S2_contig797.16122.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Match: Cupin-like (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 434 bits (1117), Expect = 9.480e-154 Identity = 218/227 (96.04%), Postives = 224/227 (98.68%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGENLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPNEAIQASLNFEDPALQALIESLPEAPAAARRQCLEMCGLADGGDGFSYSFGY 681
MKTSFC+AAGLV+AAG MSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGE+LRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELP+EAIQASLNFEDPALQ LIESLP+APAAARRQCLE CGLADGGDGFSYS+GY
Sbjct: 1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGDGFSYSYGY 227
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Match: Cupin (type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 356 bits (914), Expect = 1.040e-122 Identity = 177/227 (77.97%), Postives = 199/227 (87.67%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGENLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPNEAIQASLNFEDPALQALIESLPEAPAAARRQCLEMCGLADGGDGFSYSFGY 681
MKTSFCAAAG V+AAGLMS+ Q GVVT QQQIT++NPEDFVF+LGGPEPDA VDGFQ+R A + Q+PALDGQGI+M LVNLD C INLPHIHPRATEM YVI GE LRVAFVEENGGEGAVVNDL+QGDV FFPQGLIHY+QNL CEP TFLAALNN+DPGA+TITTRFFELP EAIQAS+NFE+P LQ LIESLP+APAAAR+QCL+ C +A+ G+ FSY + Y
Sbjct: 1 MKTSFCAAAGFVIAAGLMSAV-QVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAEPGNHFSYDYTY 226
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Match: Cupin (type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 171 bits (432), Expect = 2.190e-49 Identity = 93/188 (49.47%), Postives = 119/188 (63.30%), Query Frame = 1
Query: 85 TAQQQITMFNPEDFVFTL-GGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGENLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPNEAIQASLNFE-DPALQALIESLPEAPAAARRQCLEMCGL 642
T Q++ FN EDF+ L P+ G + LG +PAL QG+AM L+NL+ C NLPH+HPRA+E YVI G N++V F+EENG + +VNDL QG TF PQG IHY+ NLGCE +AA NN+DPG +TI +FF+LP+ AI ASL DP ++AL SLP PA +CL CG
Sbjct: 37 TEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQG-NVQVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGF 222
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Match: Cupin-like (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI) HSP 1 Score: 160 bits (406), Expect = 2.540e-47 Identity = 83/99 (83.84%), Postives = 89/99 (89.90%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATE 297
MKT FCAAAG V+AAGLMSST QASGVVTAQQQIT+FNPEDFVF+LGGPEPDA VDGFQIR + Q+PALDGQGI+MALVNLD C INLPHIHPRATE
Sbjct: 1 MKT-FCAAAGFVIAAGLMSSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Match: Cupin-like (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI68_ECTSI) HSP 1 Score: 159 bits (402), Expect = 2.530e-46 Identity = 82/100 (82.00%), Postives = 89/100 (89.00%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEM 300
MKT FCAAAG V+AAGLM ST QASGVVTAQQQIT+FNPEDFVF+LGGPEPDA VDGFQIR + Q+PALDGQGI+MALVNLD C INLPHIHPRATE+
Sbjct: 1 MKT-FCAAAGFVIAAGLMPSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEV 99
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Match: RmlC-like (cupin n=2 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165BNY0_EXIGL) HSP 1 Score: 142 bits (357), Expect = 1.970e-38 Identity = 91/206 (44.17%), Postives = 114/206 (55.34%), Query Frame = 1
Query: 37 MAAGLMSSTAQASGVVTAQQQITMFNPE-DFVFTLGGPEPDAPVDGF--QIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGENLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPNEAIQASLN-FEDPALQALIESLPEAPAAARRQCLEMCGL 642
MAA L S QA+ T Q+I++ + DFVF P V G A PAL G G+AM L LDAC+IN PH HPRATE V+NG LR F+ ENG ++ND+ T FPQG IH+E NLGCEPV F+AA NN+DPG + I RFF LP I ASL ++ L +P+ A ++C + CGL
Sbjct: 1 MAAVLPSELQQAA---TQVQRISLLKDDADFVFNFIDPSKPLEVVGAGGHTTHAARDTFPALVGTGMAMTLGFLDACSINTPHTHPRATEFNLVMNG-TLRAGFLAENGAR-FIMNDVPALSATIFPQGAIHFEANLGCEPVIFIAAFNNEDPGVLQIAQRFFGLPGSVIGASLGGLGVEEIEKLAGLIPDNIALGVKECFDHCGL 201
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Match: Cupin (type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 144 bits (363), Expect = 2.880e-38 Identity = 76/175 (43.43%), Postives = 101/175 (57.71%), Query Frame = 1
Query: 124 FVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGENLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPNEAIQASLNFEDPALQALIESLPEAPAAA--RRQCLEMCGL 642
F F E D G + A++ Q PAL G G++ LV+L C+IN PH+HPRATE+ Y+I G + V F EENGG V ND+ +GD FFP LIH++ N CEP F+A LN+DD G TI FF LP++ + +L ++ + L E LP PA R +C CGL
Sbjct: 147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGR-VSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Match: Cupin (type-1 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FMH1_VITBC) HSP 1 Score: 142 bits (358), Expect = 4.390e-38 Identity = 71/185 (38.38%), Postives = 106/185 (57.30%), Query Frame = 1
Query: 85 TAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGENLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPNEAIQASLNFEDPALQALIESLPEAPAAARRQCLEMCG 639
TA + + F EDFVF L + G ++R A + +P+L G G++ AL L C +N +HPRATE+ YVIN L V FVEENGG + N L G ++F P+GL+H+ N GCE FL+ N++DPG +TI F++ + ++QA+ N + + + S+P +P +CL CG
Sbjct: 33 TALKFRSQFKTEDFVFNLAAAKAGDAGKGGELRVAAVAAMPSLAGNGVSQALYRLYPCGMNSVQMHPRATELFYVINATELHVGFVEENGGR-TIENVLKTGQLSFVPKGLLHWHYNAGCEDAIFLSTFNHEDPGVLTIVNALFDINSTSLQAAFNVDADQIADIKSSIPASPVPGIAECLAKCG 216
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Match: RmlC-like (cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG) HSP 1 Score: 140 bits (354), Expect = 7.290e-38 Identity = 79/190 (41.58%), Postives = 113/190 (59.47%), Query Frame = 1
Query: 82 VTAQQQITMFNPEDFVFTLGGPEPDAPV-DGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGENLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFE-LPNEAIQASLN-FEDPALQALIESLPEAPAAARRQCLEMCGL 642
+T Q++++ + +DFVF + + DG + AAT PAL G IAM + + C+INLPHIHPRATE+ ++ G+ F EENG +VN L +G+VT FP G IH+EQNL CEP F+AA N++DPG TI + F LP + + ASL ++ L + LP+ PA ++C + CGL
Sbjct: 46 ITETQRLSLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQGK-FEAGFFEENGAR-FIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Match: Cupin (type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA80_VITBC) HSP 1 Score: 140 bits (354), Expect = 1.820e-37 Identity = 74/186 (39.78%), Postives = 105/186 (56.45%), Query Frame = 1
Query: 85 TAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGENLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPNEAIQASLNFEDPALQALIESLPEAPAAARRQCLEMCGL 642
TA + + F FVF L P G ++R A +G +P+L G G++ L L C +N +HPRA+E+ YVIN L V FVEENGG V N L G ++F P+GL+H+ N GCE FL+ N++DPG VTI F++ ++QA+LN + + L S+P +P +CL CGL
Sbjct: 34 TALKFRSQFGSSQFVFDLARMSPVDAGKGGELRKADVGSMPSLAGNGVSQVLYRLYPCGMNSVQMHPRASELFYVINATELVVGFVEENGGR-TVENTLKTGQLSFVPKGLMHWHYNAGCEDAVFLSTFNHEDPGVVTIVNALFDINATSLQAALNVDRALVADLKTSVPPSPVPGIAECLRRCGL 218 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig797.16122.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig797.16122.1 >prot_E_fasciculatus_S2_contig797.16122.1 ID=prot_E_fasciculatus_S2_contig797.16122.1|Name=mRNA_E_fasciculatus_S2_contig797.16122.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=228bp MKTSFCAAAGLVMAAGLMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEback to top mRNA from alignment at E_fasciculatus_S2_contig797:2944..4962- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig797.16122.1 ID=mRNA_E_fasciculatus_S2_contig797.16122.1|Name=mRNA_E_fasciculatus_S2_contig797.16122.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2019bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig797:2944..4962- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig797:2944..4962- >mRNA_E_fasciculatus_S2_contig797.16122.1 ID=mRNA_E_fasciculatus_S2_contig797.16122.1|Name=mRNA_E_fasciculatus_S2_contig797.16122.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=684bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig797:2944..4962- (Ectocarpus fasciculatus EfasUO2)back to top |