mRNA_E_fasciculatus_S2_contig7961.16116.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7961.16116.1
Unique NamemRNA_E_fasciculatus_S2_contig7961.16116.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7961.16116.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJM0_ECTSI)

HSP 1 Score: 607 bits (1565), Expect = 2.080e-214
Identity = 343/397 (86.40%), Postives = 353/397 (88.92%), Query Frame = 1 
Query:   10 AAAELAPACPLAAELEDEERKEFLTSHVAPGDVDARDEMIAFWSRVIAHAFGKAACLSLDSKVLATSSLDWVGVVAPGLELAMAHMISSGELLEGSEIVEEETGLARRLVMAPIMYLAGMVGLGGGGGGSQYVNRTVLEDLAEQVVGYCQHLPADERTVYLLAAGHSEASGTTAASHPVAQDASPWNFEQLCRAAA----AATAATRVASGRGPHTLEKCPAAVPGMLARISSDDVALFAKYLARTKRAVTEGRLLKVLSRGGGSGKTVAEATTVSETEKDLLRLRCTAVASLEASASDLGVRIQRVQQDALRENRRGQKRAALVHLRRMKQYQAARDKRLSSLYTLETALDQVKQLRLDKQVLEAHEAATSALKACRETQGLTVERVEGTLDALAE 1188
            A AELAPACPLAA+LEDEER EFLTSHVAPGDVDARDEM+ FWSRV+AHAF KAACLSLDSKVLATSSLDW GVVAPGL+LAM+HM+SSGELLE SEIVE ETGLARRLVMAPIMYLAGMVGLGG     QY NR VLEDLAEQVVGYCQHLP DERTVYLLAA HSE    TAAS PVAQ ASPWNFEQLCRAAA    A T ATRVASGR P T EKC +AVP MLARISSDDVALFAKYL RTKRAVTEG LLKVLSRGGGS +  A A TVSETEKDLLRLRCT VASLEASASDLG+RIQRVQQDAL ENRRGQK+AALVHLRRMKQYQAARDKRLSSL TLETALDQVKQLRLDKQVLEAHEAATSALKACRETQGLTVERVE TLDALAE
Sbjct:   13 AGAELAPACPLAADLEDEERMEFLTSHVAPGDVDARDEMVEFWSRVVAHAFEKAACLSLDSKVLATSSLDWGGVVAPGLDLAMSHMVSSGELLERSEIVEAETGLARRLVMAPIMYLAGMVGLGGXXXXGQYANRNVLEDLAEQVVGYCQHLPPDERTVYLLAAVHSE----TAASRPVAQHASPWNFEQLCRAAASEAAATTTATRVASGRAPPTPEKCSSAVPRMLARISSDDVALFAKYLVRTKRAVTEGGLLKVLSRGGGS-RVAAAAATVSETEKDLLRLRCT-VASLEASASDLGLRIQRVQQDALMENRRGQKQAALVHLRRMKQYQAARDKRLSSLLTLETALDQVKQLRLDKQVLEAHEAATSALKACRETQGLTVERVENTLDALAE 403
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7961.16116.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L709_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 5.530e-183
Identity = 311/401 (77.56%), Postives = 326/401 (81.30%), Query Frame = 1 
Query:   10 AAAELAPACPLAAELEDEERKEFLTSHVAPGDVDARDEMIAFWSRVIAHAFGKAACLSLDSKVLATSSLDWVGVVAPGLELAMAHMISSGELLEGSEIVE---EETGLARRLVMAPIMYLAGMVGLGGGGGGSQYVNRTVLEDLAEQVVGYCQHLPADERTVYLLAAGHSEASGTTAASHPVAQDASPWNFEQLCRAAAAAT------AATRVASGRGPHTLEKCPAAVPGMLARISSDDVALFAKYLARTKRAVTEGRLLKVLSRGGGSGKTVAEATTVSETEKDLLRLRCTAVASLEASASDLGVRIQRVQQDALRENRRGQKRAALVHLRRMKQYQAARDKRLSSLYTLETALDQVKQLRLDKQVLEAHEAATSALKACRETQGLTVERVEGTLDALA 1185
            AAAELAPACPLAA+L DEER EFLTSHVAPGDVDARDEM+ FWSRVIAHAF KAACLSLDSKVL TSSLDW GVVAPGL+LAM+HM+SSGELLE SEIV    +  G    +    +M     +G           NR VLEDLAEQVVGYCQHLP +E TVYLLAAGHSEAS    AS PVAQ ASPWNFEQLCR AAAA        ATRVASGRGP T EKC  A P MLA +SSDDVALFAKYL RTKRAVTEG LLKVL RGGG+ +  A   TVSETEKDLLRLRCT VASLEASASDLG+RIQRVQQDAL ENRRGQKRAALVHLRRMKQYQAARDKRLSSL TLETALDQVKQLRLDKQVLEAHEAAT+ALKACRETQGLTVERVE TLDALA
Sbjct:   13 AAAELAPACPLAADLGDEERMEFLTSHVAPGDVDARDEMVEFWSRVIAHAFEKAACLSLDSKVLVTSSLDWGGVVAPGLDLAMSHMVSSGELLERSEIVVFMWKVKGSFAVVTFFVLMLRPLRIGK----------NRNVLEDLAEQVVGYCQHLPPNESTVYLLAAGHSEAS----ASCPVAQHASPWNFEQLCRTAAAAAEDAATATATRVASGRGPPTPEKCSVAAPRMLAHMSSDDVALFAKYLVRTKRAVTEGGLLKVLFRGGGN-RVAAAGATVSETEKDLLRLRCT-VASLEASASDLGLRIQRVQQDALMENRRGQKRAALVHLRRMKQYQAARDKRLSSLLTLETALDQVKQLRLDKQVLEAHEAATNALKACRETQGLTVERVEDTLDALA 397
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7961.16116.1 vs.
Match: Snf7-domain-containing (protein n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI00044082B8)

HSP 1 Score: 65.1 bits (157), Expect = 8.670e-8
Identity = 54/171 (31.58%), Postives = 94/171 (54.97%), Query Frame = 1 
Query:  688 ISSDDVALFAKYLARTKRA-VTEGRLLKVLSRGGGSGKTVAEATTVSETEKDLLRLRCTAVASLEASASDLGVRI-QRVQQ--DALRENRRGQKRAALVHLRRMKQYQAARDKRLSSLYTLETALDQVKQLRLDKQVLEAHEAATSALKACRETQGLTVERVEGTLDALAE 1188
            +S  DV +  ++L R ++  VT+G+ +KV+         +     +S  +K +L L+ TAV ++E     L  RI +++Q+  + L  NR   K  A+ HL+  KQY+    KRL SL  L+  L QV+    D ++++ +E++T+ L+A      L  ER++ T+DA+AE
Sbjct:  219 LSETDVKVLLRFLDRDRKIIVTDGKAIKVVDSIDSKTPRI-----ISSIDKGILELK-TAVENMELQIEALNKRITEKIQKIKECLGANR---KEVAMTHLKSRKQYEDLLRKRLGSLEVLQATLIQVEAAAQDVEIMKQYESSTATLRAILSHPSLQRERIDATMDAMAE 380
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7961.16116.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized2.080e-21486.40protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.530e-18377.56protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Snf7-domain-containing8.670e-831.58protein n=1 Tax=Fomitiporia mediterranea (strain M... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7961contigE_fasciculatus_S2_contig7961:2056..6844 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score616.7
Seed ortholog evalue7.6e-174
Seed eggNOG ortholog2880.D7FJM0
Model size1188
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Snf7
EggNOG OGs2D0TJ@1,2SFEZ@2759
Cds size1188
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7961.16116.1prot_E_fasciculatus_S2_contig7961.16116.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7961 2056..6844 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842456.275129-CDS-E_fasciculatus_S2_contig7961:2055..23611696842456.275129-CDS-E_fasciculatus_S2_contig7961:2055..2361Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7961 2056..2361 +
1696842456.287019-CDS-E_fasciculatus_S2_contig7961:3088..31951696842456.287019-CDS-E_fasciculatus_S2_contig7961:3088..3195Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7961 3089..3195 +
1696842456.2962937-CDS-E_fasciculatus_S2_contig7961:3996..41081696842456.2962937-CDS-E_fasciculatus_S2_contig7961:3996..4108Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7961 3997..4108 +
1696842456.3059504-CDS-E_fasciculatus_S2_contig7961:4857..51941696842456.3059504-CDS-E_fasciculatus_S2_contig7961:4857..5194Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7961 4858..5194 +
1696842456.3158603-CDS-E_fasciculatus_S2_contig7961:6041..62351696842456.3158603-CDS-E_fasciculatus_S2_contig7961:6041..6235Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7961 6042..6235 +
1696842456.3354895-CDS-E_fasciculatus_S2_contig7961:6712..68441696842456.3354895-CDS-E_fasciculatus_S2_contig7961:6712..6844Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7961 6713..6844 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7961.16116.1

>prot_E_fasciculatus_S2_contig7961.16116.1 ID=prot_E_fasciculatus_S2_contig7961.16116.1|Name=mRNA_E_fasciculatus_S2_contig7961.16116.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=396bp
MPDAAAELAPACPLAAELEDEERKEFLTSHVAPGDVDARDEMIAFWSRVI
AHAFGKAACLSLDSKVLATSSLDWVGVVAPGLELAMAHMISSGELLEGSE
IVEEETGLARRLVMAPIMYLAGMVGLGGGGGGSQYVNRTVLEDLAEQVVG
YCQHLPADERTVYLLAAGHSEASGTTAASHPVAQDASPWNFEQLCRAAAA
ATAATRVASGRGPHTLEKCPAAVPGMLARISSDDVALFAKYLARTKRAVT
EGRLLKVLSRGGGSGKTVAEATTVSETEKDLLRLRCTAVASLEASASDLG
VRIQRVQQDALRENRRGQKRAALVHLRRMKQYQAARDKRLSSLYTLETAL
DQVKQLRLDKQVLEAHEAATSALKACRETQGLTVERVEGTLDALAE
back to top

mRNA from alignment at E_fasciculatus_S2_contig7961:2056..6844+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7961.16116.1 ID=mRNA_E_fasciculatus_S2_contig7961.16116.1|Name=mRNA_E_fasciculatus_S2_contig7961.16116.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4789bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7961:2056..6844+ (Ectocarpus fasciculatus EfasUO2)
ATGCCGGACGCGGCCGCGGAATTGGCACCAGCATGCCCTCTGGCTGCCGA
GTTGGAAGACGAAGAGAGGAAGGAGTTCCTGACATCCCATGTCGCTCCAG
GCGATGTTGATGCCCGAGATGAGATGATCGCCTTCTGGTCAAGGGTGATA
GCCCACGCCTTCGGGAAAGCGGCTTGCTTGTCCCTCGACTCCAAGGTGTT
GGCGACGAGCTCGCTGGACTGGGTAGGCGTGGTTGCTCCTGGGTTGGAGC
TTGCGATGGCGCACATGATTTCGTCGGGGGAGCTTTTGGAGGGCAGCGAA
ATCGTGGTGAGATAAGTAGGCTGTTTGTTTGTCATCAACTACGGAGTGTA
GATGGTAGATGGCATTGACTGCTGCAGTCTAGATGGTACAGTCTACGAAC
GTACATTGAATACGGCCGTATTTGGCGTGCTTGCTGTATGGCACTTACCC
ATAAATGATGGCGAAAACCGTAACGCAGATGACGATCATGTGTGTGTATA
TTTTCGTTCCATCTGCTCTGACGCACCAGGAATTGTGGACGGTAATCGGT
AAACACTGGACCTCTTGCCTGATCTCTTTCTCCGCCGTCCGTCGTGCGGT
GGTTGCCTCGTGGCCATCGCACGCCTGAGATCCGTTGTGTTTTGCCTGTG
TGGTCATGCCGCTCACGACACACTCACCCTCACTTTCCGTTTACGCACAA
GCTTCAGTTTCGAGTTTGCACTTCAGAGAGATCCGAACCCGCGCTCTGGA
TAGTCAGAAGGTGTCAACGTTGTTTATCTGGGCGACCGGATCGACGCAGG
TTCGGCTCTGTACCCGATGTTACAGCTGGTTTTTACCAACTTTGTCGACG
GCGGGATTGCGATGTCCCGTCTCAAGAGCGCACGAGACAGCAGTCTGTCC
GCACAAACGGCGAGTTCGCTAGTGCGCATCACAGTCCACCTGTGGGTGAC
CGCCGTACCGTTGCTTGTCGCTACTGTACTTCGATTTACCATTGACCTTG
GACTTGATGTGTCATGTCTCGTCTCTGTTGAAGGAGGAGGAGACGGGGCT
GGCGAGGCGCTTGGTCATGGCTCCAATCATGTACTTGGCCGGAATGGTCG
GTCTGGGAGGGGGGGGGGGAGGCAGTCAATACGTCAACAGGTGCGACGAT
ACTGTAGCAGCTTAACTATTTAGTTTATTTCTGTCACTCGTATTCTCTGG
TCTATCCCACCTAGGCTTCTCTTGTTTGCACGCAATATATATTGTTGCAA
CCGCTGGCAATGCGGTCGCAATCCGTATGCTCTCCGTCGCTGGAGAAAAA
AGAGCACCTCTTCAGAAGAGAGAGCTTTCGTAGGAACCGCAAGACGAAAA
ATATGCACGAAGGACATGAATGGGTTGGAGTACATGTAGCTGAAGGGCCG
GCCCCCTTCTCTATTTGATTTTTGCAGCAGCATTTCAAGGCCTTTGCGAT
GGGTAAATGAGATGGCCCAACAGCAGTGTGTGGCAGACGGCGGGCGGCCG
ACGCACGCGTTTATCCGAGACAAGTACTCAATGTACTCTGGTTGGTCTGC
GTTCTGTACGGCGTTTGAAGTGAACAGGAGACACCAGCCGTTTCTGTCTC
ATTGCCACGCCTTCTAACAGGGCCCTCAAGAGCAGTGGTGCTCGTTCCCA
CAGGCACACAGGCACGAGATCGCACGGCCGCCACCCCTGCGACGCTTGTG
TCCTCTTGATGCACGGAACACATCACCTAAGAACCTCGTACTTTTCCCTC
AACGCTCTTTGTAGCAACCTATCATTGAGTACATGATGTATATCTTGACC
TGGAACGTGTTCTCTCGGCCAAGTTCTTACACTTCTAATTTTGTTTTTTG
GCTGAATTTCTTACTGTAGCTCCCAGGTTCTGAACTGGTGACACATAATC
TGTATCGACGCTCCCTCCTCTCCGAATCGGGAAAATATCAGGACCGTTCT
TGAGGATTTGGCGGAACAAGTGGTGGGATACTGCCAGCACCTACCAGCAG
ACGAGAGGACCGTCTACTTGCTAGCGGCCGGTCACAGCGAGGCAAGTGGT
ACGGTATGAGCATAACTGTCGCAGGGTACTAACAGGTTGTGCATAACTGT
TGCTGTTCATTTGAAGATTTCTGTGTCGCCTTTGTAGAAACTCAATTGAA
GATGAAGACAAGAGTGGTTAGTCTTCTTATTGCGCCATGGCAAAAGATCG
CTTCGCTCACAAAGCAAAGACGCTACTGCTGTATGATCGTGATCGTGTTG
TCACCCCCTCCCCTCCCCTCTCGAAGCCACCTTGGCAACGTCACAACAGC
AAAAGCAGTCTCATCCATGGCAGTTCCCTCTTTTCCTCCTGAAGTTTCGG
CTGCGGTTGGTTATGTTTTGTCTTGAACACGCTGCAGAGTGGAGAGCCAC
GGTGGTTGGCAACTCCAGCAGCTGTGGCAGCCTTTTTTGCTACCAGAGTG
TTTCCTCTATGAGACTGTTTGTCTCGCCTGCACGTGTGGGGCGTGTGGAC
TGCTCGAAAGTTTTTTTTTTCTCTTCATGTCTTTGCTCTTTTTTTTTTTC
TCGTTGTTCTTTCCGGCGGCCGGGTCTACAGTACCACTCCAAATCGTGCA
CTGTACATATCAATCTTCGAGGCACTCAGTCGGTGCTGACTACAGCACTA
GGTGCCTTTTTCGGTGTCTCTTGCTAGCACGTGATGCCAAGACCCACCTG
CCCTATCTCTATATACCTCATTCTCCACCTCTATCTTTTTCGCGTTCTCC
TTTGCAACCCGCCAAAAACTCCAATTGATTCCTGCTTCTCATGTTCTTTC
AGACGGCGGCAAGCCACCCGGTGGCGCAAGACGCGTCGCCCTGGAACTTC
GAGCAGCTCTGTCGGGCTGCTGCTGCTGCCACTGCTGCCACACGCGTAGC
TAGCGGTCGTGGGCCCCACACCCTCGAGAAATGTCCAGCCGCTGTGCCCG
GGATGTTGGCGCGTATATCAAGCGATGACGTCGCTCTCTTTGCCAAGTAC
CTCGCCCGTACGAAGCGAGCCGTGACGGAGGGGAGGCTGCTGAAAGTACT
CTCTAGGGGTGGGGGGAGTGGCAAGACGGTTGCGGAGGCAACGACGGTGT
CTGAGACTGAGAAAGACTTGCTGCGGCTTCGGTGTACCGGTGAGAGTCGT
CTTTCAACGGCATTGTTTTTTTTTCGTGTACGTACATATCTTACAGAAAC
GTTTTGTTTTTTCTTTCAGAAACTCTCATGATTTTGATTGCGAACTCGGC
TGATTGTTTAGTCCATGATTCTCCTCGGAAGGTCTCCTAGCCGATTCTAA
CAAACCCTCTCAAGTATTTGATTGAGAACTCGTTAGCTTGTTGAGTCCGT
GGTTCCCTTAGTGTCCCACAACTAGTCCGGAAGCACGGACACATGCCAGG
TGATGGCGATCAGAAGCACTTGTATGCGTTGTCCTGCATGCCCGCCCCGT
CCAAATCCCGCGAGCGATCGCTGTCTTCCAAGCCAACAAATAGTGTGTGG
TCTGGTCTCTCCCGCCAATCCTGTTGTTGTTGCTACCAAGTTATACCTGG
CTCTGGCTAGCAACCAGCAGTGTGCTCTGTGGCCGTTCAAGGATAATTCA
TCCACGCTTGAAGCGCTGCTTCGTCACCACGCGCGTTCCCACCAGCAGCC
GAAAAAAGTCTGGGTGACCTCTTATCGTGGATGTATAGATCGGATCCCTG
GCAACGCCAATACCGTCTTGGGTGTACCAAGCACTCGGTATCTGGGAGCG
GTCCCTAACGCCAAACCTACCAGCAGTTTTAGTTTCGTCATTTCGTGCAC
CATTCTTTGTCTGGCCAAACCACCCATACCGTAGCCATGCATAACCCCAA
GTGCTTTTGGTTCAGAATCTACTCGCTTCCGAACGTGGCAGCGCTTGACG
CACCTTTACCCTCTGCTTCACCGACATATGAACAAGCTCTAAACTGCTTA
TCCCTAAATCCTAACCTAACCGCACCTTACCCTAAGCAGTCGCCAGTCTA
GAAGCGAGCGCGTCGGATCTGGGAGTGCGAATACAGCGGGTACAGCAGGA
CGCCCTGAGGGAAAACCGTCGGGGGCAGAAGCGGGCGGCGCTCGTGCACT
TGCGAAGGATGAAGCAGTATCAGGCCGCTAGGGACAAGCGGCTCTCCTCC
CTCTATACGCTGGAAACGGCGTTAGATCAGGTGGGGGCACAAGCACAGCA
CTGTGCTCGGTCGGAGCAAGGCCAGAAAGGTGTTGCCGGACAAATTATTC
CGTTCCGATCGGGCTGGCCTTGTCTTCCCTGCAACACGTTTCTCGGTACA
ATAACCCAGACCACCACAGCGGAGCTCTTTTTTCTTTTTGTGGGATTTGG
GAATTACTCCGAACCATGTTCATACTTCGCCACCCTTTTTCCCTCGAACG
AACATCCTGGGTGGATTTCCGGAGAAAATTGCTGCTGGTAGATGATAGAT
ATATTTCCACCGTGGTATTGTCGGAGGAATGCCCGTGCCGCACAGGGAAA
CCGAAGTATTAAGAAAACTTCATTACTGTTTCACTCTTTTCCCCCGACCA
ACAGCGGATTTTGATTTTGATTTTTTTCGATTCTGATTGTCGAGCATCGT
TGTTTCACGGAGAGCCTCACGACGTCGCTACTGCATGTATCGCGATCGAA
TGAACAGGTCAAGCAGCTGAGGTTGGACAAGCAGGTGCTGGAGGCCCACG
AGGCTGCCACGAGTGCCCTCAAGGCCTGCAGGGAGACCCAGGGACTGACG
GTGGAAAGGGTGGAGGGCACGCTGGACGCGCTAGCAGAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7961:2056..6844+

>mRNA_E_fasciculatus_S2_contig7961.16116.1 ID=mRNA_E_fasciculatus_S2_contig7961.16116.1|Name=mRNA_E_fasciculatus_S2_contig7961.16116.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1188bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7961:2056..6844+ (Ectocarpus fasciculatus EfasUO2)
ATGCCGGACGCGGCCGCGGAATTGGCACCAGCATGCCCTCTGGCTGCCGA
GTTGGAAGACGAAGAGAGGAAGGAGTTCCTGACATCCCATGTCGCTCCAG
GCGATGTTGATGCCCGAGATGAGATGATCGCCTTCTGGTCAAGGGTGATA
GCCCACGCCTTCGGGAAAGCGGCTTGCTTGTCCCTCGACTCCAAGGTGTT
GGCGACGAGCTCGCTGGACTGGGTAGGCGTGGTTGCTCCTGGGTTGGAGC
TTGCGATGGCGCACATGATTTCGTCGGGGGAGCTTTTGGAGGGCAGCGAA
ATCGTGGAGGAGGAGACGGGGCTGGCGAGGCGCTTGGTCATGGCTCCAAT
CATGTACTTGGCCGGAATGGTCGGTCTGGGAGGGGGGGGGGGAGGCAGTC
AATACGTCAACAGGACCGTTCTTGAGGATTTGGCGGAACAAGTGGTGGGA
TACTGCCAGCACCTACCAGCAGACGAGAGGACCGTCTACTTGCTAGCGGC
CGGTCACAGCGAGGCAAGTGGTACGACGGCGGCAAGCCACCCGGTGGCGC
AAGACGCGTCGCCCTGGAACTTCGAGCAGCTCTGTCGGGCTGCTGCTGCT
GCCACTGCTGCCACACGCGTAGCTAGCGGTCGTGGGCCCCACACCCTCGA
GAAATGTCCAGCCGCTGTGCCCGGGATGTTGGCGCGTATATCAAGCGATG
ACGTCGCTCTCTTTGCCAAGTACCTCGCCCGTACGAAGCGAGCCGTGACG
GAGGGGAGGCTGCTGAAAGTACTCTCTAGGGGTGGGGGGAGTGGCAAGAC
GGTTGCGGAGGCAACGACGGTGTCTGAGACTGAGAAAGACTTGCTGCGGC
TTCGGTGTACCGCAGTCGCCAGTCTAGAAGCGAGCGCGTCGGATCTGGGA
GTGCGAATACAGCGGGTACAGCAGGACGCCCTGAGGGAAAACCGTCGGGG
GCAGAAGCGGGCGGCGCTCGTGCACTTGCGAAGGATGAAGCAGTATCAGG
CCGCTAGGGACAAGCGGCTCTCCTCCCTCTATACGCTGGAAACGGCGTTA
GATCAGGTCAAGCAGCTGAGGTTGGACAAGCAGGTGCTGGAGGCCCACGA
GGCTGCCACGAGTGCCCTCAAGGCCTGCAGGGAGACCCAGGGACTGACGG
TGGAAAGGGTGGAGGGCACGCTGGACGCGCTAGCAGAG
back to top