mRNA_E_fasciculatus_S2_contig7953.16111.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: PUB (domain, zinc finger protein Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G613_ECTSI) HSP 1 Score: 482 bits (1241), Expect = 1.050e-165 Identity = 285/307 (92.83%), Postives = 295/307 (96.09%), Query Frame = 1
Query: 1 AVAGGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARDEALLANAKEKLEEAIASYVPTKAS 921
+ AGGVAQSLKCD+C VTL+DMAAAELHASKTSH +FSEST+ VKALTPEEK KLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTK+EMQAIARKNEIAR +KEKQAF+QERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXX EE+QPA K EKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARDE LLANAKEKLE+AIASYVPTKAS
Sbjct: 288 SAAGGVAQSLKCDDCNVTLKDMAAAELHASKTSHDNFSESTEEVKALTPEEKEAKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKEEMQAIARKNEIARIRKEKQAFDQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXXXEEEQPAVKAEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARDEGLLANAKEKLEDAIASYVPTKAS 594
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: PUB (domain, zinc finger protein thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z023_9STRA) HSP 1 Score: 257 bits (657), Expect = 5.510e-78 Identity = 174/307 (56.68%), Postives = 215/307 (70.03%), Query Frame = 1
Query: 1 AVAGGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGG--PSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKE----ESRLFMSMEARDEALLANAKEKLEEAIASY 903
+ A A SLKCD+CG LRDM AAELHA KT HS+FSES + + LTPEE+A K+ +K +A RR AR EEEK + V REKARRTMGKE T++EM+A AR EI KKEK ++ER RL+AEIAKDKAERKARGGKL+ KLGV+GY+P Q + G PSA XXXXXXXXXXXX + +Q A KA+++L++Q VAG GGTAMKT YI N L P EEK+R+I+LDN AFK R+A C+GGV LL+A+GFAK E+RL MS +ARDEALL K +++ A+A+Y
Sbjct: 287 SAAEAAANSLKCDDCGALLRDMVAAELHAHKTGHSNFSESKEEITPLTPEERAAKVQALKDRLAARRTAREEEEKAESVTREKARRTMGKEMRATREEMEAQARMREIQMRKKEKLDAQRERERLRAEIAKDKAERKARGGKLAGKLGVEGYQPVGLQQMDDGSAPSAXXXXXXXXXXXXXASRDARLEQAA-----------KAIELLSQQRVAGEGGTAMKTINIYIGNVLAHPAEEKYRAISLDNKAFKARIAGCLGGVGLLRAIGFAKADDGGEARLVMSADARDEALLQAVKARIDAALATY 582
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V754_9STRA) HSP 1 Score: 219 bits (559), Expect = 4.920e-66 Identity = 148/302 (49.01%), Postives = 184/302 (60.93%), Query Frame = 1
Query: 19 AQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGV-YGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESR----LFMSMEARDEALLANAKEKLEEAIASYVP 909
A+SLKC +CG L+DM AELHASKT H++F EST+A+K L+PEEKA+K+ +KA IA RRAAR EEEKVDHV REK RR MGKE KTK+E+ A RK + L+A +A+DKAER A GKL +KLGVDGY PA YG A XXX ++E P A EK++K + +++R G GG A+KT LAY KN + KPEE KFR+IN++NNAFK RVA GGVALLKAVGF +E + E D L + KLE A A++ P
Sbjct: 53 AKSLKCMDCGALLKDMVVAELHASKTGHANFEESTEAIKPLSPEEKAKKIEELKAKIAARRAAREEEEKVDHVAREKQRRFMGKEMLKTKEELDAQQRKRDAYLXXXXXXXXXXXXXXLRALLARDKAERAANKGKLGSKLGVDGYAPAIDNVTPYGATPAPAPGTXXXTGAEEAKAEAKEDVPPA------EKVDKCIGLISRHRTGGDGGVALKTLLAYTKNIVEKPEEAKFRTINMENNAFKKRVAGIAGGVALLKAVGFVQEVGEDGGNKLVLPEDCDRGFLLETRAKLEAAFAAFQP 348
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV98_HETAK) HSP 1 Score: 195 bits (496), Expect = 1.200e-56 Identity = 146/302 (48.34%), Postives = 183/302 (60.60%), Query Frame = 1
Query: 10 GGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAA--AQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKE--ESRLFMSMEARDEALLANAKEKLEEAIASY 903
G VA+SLKC +CG LRD+AAAELHA KT H++F ES + VK LTPEEKA K+ +KA +A RRA R E +KVD +REK RR GKE AKT++E++ K+EK A + RL+A I +DK ER A GKLS+KLG GY P+ A YG A XXXXXX X E A EE ++KA+ +++ G GG A+KT AY NAL ++ KFRSIN+DNNAF RVA IGGVALL+A+GF K+ E+RL + A L KLE A+ASY
Sbjct: 49 GQVAKSLKCGDCGALLRDVAAAELHAGKTGHANFEESAEEVKPLTPEEKAAKVEALKAKLAARRAERQEADKVDTKEREKQRRFQGKEMAKTREELERAXXXXXXXAQKREKAAAKAXXDRLRALIEQDKRERAANKGKLSSKLGAGGYNPSMPPASVPYGAAGAXXXXXXXVKEXEESKGAGE-----APALSPEEAIDKAIATVSKYRTGGDGGVALKTLKAYTSNALN--DDPKFRSINMDNNAFMTRVAPFIGGVALLRALGFEKDPAENRLVLPEGGDHRARLQETVAKLEAAMASY 343
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6A4_9STRA) HSP 1 Score: 166 bits (419), Expect = 8.490e-45 Identity = 118/301 (39.20%), Postives = 171/301 (56.81%), Query Frame = 1
Query: 16 VAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVE-KSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTK-PEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARD--EALLANAKEKLEEAIASYV 906
VA+S+KC E G R+ A+ +A +T + F E+T+ K LT E K +K+A +KA+ A+RRA R EKV+ + REK RR G+E+ KTK+++ R EI R K+EK R+ARGG+L+ KLGVDGY P+ Q P+ P K++ E+++KA+ + + AG GGT +KT AY++NA+ K ++EK+R I LDN AFK RV+ +GG+ALLKAVGF K+E+ L +++ RD +ALL KLE+A A+YV
Sbjct: 93 VAKSIKCVETGRLFRNAMEAQAYAERTGRTQFEETTEVKKPLTEEGKKQKVAELKALAAQRRAEREGLEKVEDIDREKKRREQGQESIKTKEQLAKAQRLREIDRIKREKXXXXXXXXXXXXXXXXXXXXRRARGGRLAGKLGVDGYNPSIDQN----------DDRRNDACPTTDEPAPAPAPPKKIDLPPPEQVDKAIGTIQKYKTAGDGGTCLKTLGAYLRNAINKGDQDEKYRKIPLDNAAFKKRVSGLVGGIALLKAVGFVKDETHLELTLAVRDSNKALLEETLAKLEKAHAAYV 383
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: C2H2-type (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT89_FISSO) HSP 1 Score: 164 bits (416), Expect = 2.570e-43 Identity = 124/311 (39.87%), Postives = 167/311 (53.70%), Query Frame = 1
Query: 7 AGGV-AQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQ------GVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEES-----RLFMSMEARDEALLANAKEKLEEAIASY 903
AGG+ AQS KC+ECG L ++A ELHA+KT HSDF EST + LT EEKA K+A +K ++ +R R E EK + V RE RR MGKE KT++++ A RK EIA KKEK+ F A GKLS+KLG+DGY P A Q GV+G +E+Q K++ S K+++ + ++ G GG +K AY+ N P + KFRSIN++NNA+K RV +G LL AVGF++E+ L M+ E LLA KLE+AI +Y
Sbjct: 222 AGGLKAQSYKCNECGKILSNLANLELHANKTGHSDFEESTQSAVPLTAEEKANKIAEIKDLLKAKRREREEIEKAEEVTRELQRRNMGKEMHKTREQLDAEQRKREIALRKKEKEDFXXXXXXXXXXXXXXXXXXAANKGKLSSKLGIDGYTPDAIQYDVELGGVHG--------------------TDDEEQKKKKLKASAAKIDEYIAKVSAYRAGGDGGKCLKVLKAYVGNLANNPNDPKFRSINMENNAYKTRVKPFVGAKNLLLAVGFSQEKDSEGIDHLVMNDEPNMN-LLAETTAKLEKAIVAY 511
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UK40_9STRA) HSP 1 Score: 164 bits (415), Expect = 7.550e-43 Identity = 120/303 (39.60%), Postives = 163/303 (53.80%), Query Frame = 1
Query: 7 AGGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQP--AAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEES--RLFMSMEARDEALLANAKEKLEEAIASY 903
A GVAQS KC++CG L MA ELHA+KT H+DF EST A+K LT EEKA K+ +K ++ +R+ R EEK + + REK RR+MGKE +KT+++M AR A GKLS+KLGVDGY P A Q Y P A P +EQQ K S K+E + ++ G GG +K LAYI N + PEE+KF+ +N++N A+K +V +G LL AVGF ES L + +A D +LL++ K+KLE+A+A+Y
Sbjct: 276 AAGVAQSYKCNDCGKVLSSMANLELHANKTGHADFEESTQAIKPLTAEEKAAKMEEIKGLLKAKRSERENEEKEEEIVREKQRRSMGKEMSKTREQMDREARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMANKGKLSSKLGVDGYNPDAIQ--YNVPGAGES-------------PDQEQQKEHVKKPPPSASKIEDYIKKVSAYRAGGDGGKCLKILLAYISNVVNNPEEDKFKRVNMENKAYKGKVKPFLGAKQLLLAVGFVLNESGDTLVLGADA-DLSLLSDTKDKLEKALAAY 562
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJV6_9STRA) HSP 1 Score: 160 bits (406), Expect = 5.650e-42 Identity = 121/301 (40.20%), Postives = 152/301 (50.50%), Query Frame = 1
Query: 7 AGGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESR--LFMSMEARDEALLANAKEKLEEAIASY 903
AGGVAQS KC+ECG L +MA ELHA+KT HSDF EST +VK LT EEKA K+ +K ++ +RA R E EK D +REK RR MGKE AKTK++M RK E GKLSTKLGVDGY P Q S EQ+ A K + K++ + ++ G GG +K AY+ N P+E KF++IN+DN AFK +V IG LL AVGF + E + + E D LLA K K+E AI +Y
Sbjct: 212 AGGVAQSYKCNECGKILSNMANLELHANKTGHSDFEESTQSVKPLTAEEKAAKILEIKELLKAKRAEREEGEKEDAKEREKQRRFMGKEMAKTKEQMDIEQRKREALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKGKLSTKLGVDGYNPDGVQ---------------YDVDNEESGESGEQKQAKKPKVDAAKIDDYLSKVSAYRAGGDGGKCLKILKAYVGNVADNPDESKFKTINMDNKAFKTKVKPFIGAKQLLLAVGFQQPEGQPGSLVLAEPADYELLAATKAKIEAAIVAY 497
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D704_9STRA) HSP 1 Score: 156 bits (395), Expect = 6.630e-40 Identity = 115/266 (43.23%), Postives = 149/266 (56.02%), Query Frame = 1
Query: 145 PEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAA----KVEK-------SEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKE--ESRLFMSMEARDEALLANAKEKLEEAIASY 903
P +K L +KA IA RRA R E EK + V+REK RR GK KT +E+Q + R+ E A +KE L+ EIAKDKAER +RGG L +L DGY P+ QG YG A+ + E+ P A K E+ S E +EKA+ ++ RQ +A GG A+KT +AY+KN EEKFRSINL+N AFK+RVA +GG +LLKA+GF K+ E R F++ E D A L K KLE A+ Y
Sbjct: 315 PPKKKITLEELKARIAARRAERNEMEKKEEVQREKLRRESGKSIIKTNEELQRLQRQREFAAMRKEXXXXXXXXXXLRMEIAKDKAERASRGGYLPGRLDADGYNPSGLQGAYG---ASVAGGEDTSEGGVGTGTTVEKVPRAVGSGKGEEAMAPGTTSMESVEKAIGLMKRQRIADGGGMALKTLIAYVKNIAGTAGEEKFRSINLENKAFKSRVAPVLGGSSLLKAIGFTKDDVEGRWFLAPEHVDVAFLGEVKGKLEAALIEY 577
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0TQ21_9STRA) HSP 1 Score: 150 bits (379), Expect = 4.280e-39 Identity = 123/296 (41.55%), Postives = 172/296 (58.11%), Query Frame = 1
Query: 16 VAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEEKAEKLARMKAIIAERRAARGEEEKVDHVKREKARRTMGKEAAKTKDEMQAIARKNEIARAKKEKQAFEQERARLKAEIAKDKAERKARGGKLSTKLGVDGYKPAAAQGVYGGPSAAXXXXXXXXXXXXXXXPSEEQQPAAKVEKSEEKMEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARDEALLANAKEKLEEAIASY 903
VAQS C+ECG L +MA ELHA+KT HSDF+ESTD VK+LT EEKA K+ T++EM+ RK+ +A+ K+EK+A+ ER R++AE+AKDKAER A GKL++KL ++GYKP A Q Y XXXXXXXXXXXXXXX +E++ K K+++ + ++ G G +K LAYI+N + P+E K+++IN +N A+K RV IG LL AVGF EE+++ + ++ D +L K+KLE A +Y
Sbjct: 76 VAQSYNCNECGKVLSNMANLELHANKTGHSDFAESTDQVKSLTKEEKAAKILEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTREEMERNERKHAVAKKKREKEAYRNERERIRAELAKDKAERIANKGKLTSKLSINGYKPDAIQ--YNTNLTTXXXXXXXXXXXXXXXTAEQENTPKKKIPDVAKIDEYIQKVSSYRAGGDGAKCLKILLAYIRNVVDHPDESKYKTINTENKAYKLRVRPFIGAKTLLLAVGFQLEENKMTLGPDS-DIHILKQTKDKLEAAYNAY 368 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7953.16111.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7953.16111.1 >prot_E_fasciculatus_S2_contig7953.16111.1 ID=prot_E_fasciculatus_S2_contig7953.16111.1|Name=mRNA_E_fasciculatus_S2_contig7953.16111.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=308bp AVAGGVAQSLKCDECGVTLRDMAAAELHASKTSHSDFSESTDAVKALTPEback to top mRNA from alignment at E_fasciculatus_S2_contig7953:305..5231+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7953.16111.1 ID=mRNA_E_fasciculatus_S2_contig7953.16111.1|Name=mRNA_E_fasciculatus_S2_contig7953.16111.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4927bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7953:305..5231+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7953:305..5231+ >mRNA_E_fasciculatus_S2_contig7953.16111.1 ID=mRNA_E_fasciculatus_S2_contig7953.16111.1|Name=mRNA_E_fasciculatus_S2_contig7953.16111.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=924bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7953:305..5231+ (Ectocarpus fasciculatus EfasUO2)back to top |