mRNA_E_fasciculatus_S2_contig794.16097.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig794.16097.1
Unique NamemRNA_E_fasciculatus_S2_contig794.16097.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Tyrosine (Transport protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA9_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 4.810e-153
Identity = 235/248 (94.76%), Postives = 240/248 (96.77%), Query Frame = 1
Query:    1 MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAIIG 744
            MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGL+MMW YMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGI ALPEW  PVAFCLALGGLVLFF+EEFVAS NSVLVGVVLLSFFGLV VGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLE D+D +RKA+IG
Sbjct:    1 MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLVMMWAYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGIAALPEWASPVAFCLALGGLVLFFTEEFVASVNSVLVGVVLLSFFGLVGVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEGDVDKIRKAVIG 248          
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Tryptophan/tyrosine (permease family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI2_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.260e-70
Identity = 136/242 (56.20%), Postives = 173/242 (71.49%), Query Frame = 1
Query:    1 MDRLFSTLE--PCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMD 720
            ++RLFS +E  P DV  FKRK T+LL A +L+ GT VGAG+LALPAAT+QAGL+PS++ L+ +WVYMV T LLIAEVNVN+IC +G PG+GL+ALAE+ LGK GAR  GL+YVFIHY+LLVAYMAQGGELLA     +    G G      W GPVAF    GG +   SE+ +   N+ LV VVL SF  L+V   GG++  YLA  DWS +    PV+ +A+V+HNV+PV+TTQLE D++
Sbjct:   24 VERLFSNIERGPLDVR-FKRKSTSLLGATALVGGTTVGAGVLALPAATIQAGLVPSSLVLVGVWVYMVCTGLLIAEVNVNLICREGQPGLGLLALAERTLGKIGARAAGLLYVFIHYALLVAYMAQGGELLARFV--LGGDPGDGAA----WVGPVAFATLWGGGMALGSEKLIEGVNNALVAVVLASFALLLVSAGGGIKHEYLAHNDWSTVLQAAPVMLVALVYHNVVPVITTQLEGDVN 258          
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZW3_HETAK)

HSP 1 Score: 229 bits (583), Expect = 3.380e-69
Identity = 119/247 (48.18%), Postives = 170/247 (68.83%), Query Frame = 1
Query:    1 MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAII 741
            ++RLFS LE  +  GF+RK  ++L A +L+AGT VGAG+LALPAAT   G++PS++ L+ MW YMV + LL+AE N+N++  +G   +GL+A+AE+ LG+ G R  G  Y+FIHY LLVAY+AQGG LLA+              +LPE+ GPV FC   GGL+ F SE  + S N+V V +V+ SF GL+V+ + G++++ L  +DWS  P  VPV F+A+VFHNV+PV+ TQLE D   +R+A++
Sbjct:   42 VERLFSNLEESESGGFQRKEGSVLGATALVAGTTVGAGVLALPAATASTGVIPSSIILLGMWAYMVASGLLLAETNLNLVVREGRVNLGLLAVAERTLGRAGGRAAGAAYLFIHYCLLVAYLAQGGALLADLLLP------GQQQSLPEYLGPVGFCAIFGGLLAFGSEALIESVNNVFVTIVITSFLGLLVLATPGIEISRLFVEDWSAAPGVVPVTFVALVFHNVVPVIVTQLEADRAKIRQAVL 282          
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4P3_9STRA)

HSP 1 Score: 218 bits (556), Expect = 2.150e-64
Identity = 120/247 (48.58%), Postives = 165/247 (66.80%), Query Frame = 1
Query:    1 MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAII 741
            +DRLFS ++       +R   ++L+A SL+AGT VGAGILALPAAT+ +G++PS   L+ MWVYMV + LLIAEV++     +G  G+GL+ +AE+ LG+ G+RF G VYV +HY LLVAYMAQGG + A     + +        LP W GPV F  A GGL+   SE+ V S N+  V VVLLSF GL+ V   GV+   L +QDWS+    +PV+F+A+VFHN++PV+ TQLE ++  VR+AI+
Sbjct:  113 VDRLFSNIQRTKQGTVERDEGSVLAATSLVAGTCVGAGILALPAATVSSGVIPSTTLLLGMWVYMVASGLLIAEVSLTRTLREGQTGLGLLVMAEKTLGRAGSRFAGTVYVGLHYCLLVAYMAQGGGIAAAGIRDLTSL------PLPSWAGPVGFATAFGGLLALGSEKLVESVNNAFVAVVLLSFVGLLTVAVPGVRAERLLDQDWSQAYEMIPVMFVALVFHNIVPVIATQLEGNVSKVRQAIL 353          
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: tyrosine (transporter n=1 Tax=Anabaena sphaerica TaxID=212446 RepID=UPI00168599F2)

HSP 1 Score: 202 bits (515), Expect = 2.210e-59
Identity = 107/246 (43.50%), Postives = 165/246 (67.07%), Query Frame = 1
Query:    7 RLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGI-TALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAII 741
            RLFS LE  D +    +P ++L + +LIAGT +GAGILALPA TL +G+LPS + +I++W+Y + + LLIAEV++NV+ ++G P +G +A+ E+ LGK GAR  G  Y+F+HY+LLVAY+++GG++L  +F  +     +G+   LP W G   F    GG++    E F+   N   V +V++SF GL+++GSG V+      Q+W+ + S V V+ +A+ +HNV+PVV TQLE D+  +RK+II
Sbjct:   14 RLFSHLE-FDGNKLNHQPGSVLGSTALIAGTTIGAGILALPAVTLPSGILPSTIAIIVVWLYTLFSGLLIAEVSLNVMGAEGIPSIGFLAIVEKTLGKVGARIAGATYLFMHYALLVAYISKGGDILVSTFAKI-----AGLDNILPNWVGTTTFTFLFGGILYLGKERFIQKLNGAFVAIVIISFIGLLLLGSGQVKSEQFLFQNWNAVGSAVSVICVALFYHNVVPVVVTQLEGDLPKIRKSII 253          
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Tyrosine (transporter n=1 Tax=Anabaena sp. TaxID=1167 RepID=UPI00182C3A7A)

HSP 1 Score: 201 bits (511), Expect = 7.180e-59
Identity = 114/246 (46.34%), Postives = 165/246 (67.07%), Query Frame = 1
Query:    7 RLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITA-LPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAII 741
            RLFS LE  + S    +P ++L + +L+AGT VGAGILALPA TL +G++PS V LI++W+Y + + LLIAEV++N + S+G   VGL+A+ E  LGK GAR  G  Y+F+HY+LLVAY+AQGGE+L  +   V     SGI+   P W G   F L  GG++ +  E+F+   NS  V +VL++F GL+++G+G ++      QDWS L S V V+ +A+ +HN++PVV TQLE D   +R++II
Sbjct:    9 RLFSRLE-LNGSKLTHQPGSVLGSTALVAGTTVGAGILALPAVTLPSGIVPSTVLLIVVWLYALVSGLLIAEVSLNTMRSEGRLSVGLLAMVENTLGKLGARIAGSAYLFLHYALLVAYVAQGGEILISALTKV-----SGISHHWPGWVGTTTFTLVFGGIMYWGREQFIEKLNSAFVAIVLVAFLGLLLLGTGQIKSVQFLFQDWSALGSAVSVMLVALFYHNIVPVVVTQLEGDSRKIRQSII 248          
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Aromatic (amino acid permease n=4 Tax=Nostocales TaxID=1161 RepID=A0A1Z4INN3_9CYAN)

HSP 1 Score: 201 bits (512), Expect = 7.310e-59
Identity = 114/244 (46.72%), Postives = 158/244 (64.75%), Query Frame = 1
Query:    7 RLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAI 738
            RLFS LE    S    +P ++L + +LIAGT VGAGILALPA TL +G++PS V LI +W+Y + + LLIAEV +N +   G P +GL+A+ E+ LGK GARF G  Y+F+HY+LLVAY+AQGGE+L  +   V          LP W G  AF L  GG++    E FV   NS  V +VL SF GL+++G+  ++ +  + Q+WS LP  V V+F+A+ +HNV+P V TQLE D   +R++I
Sbjct:   14 RLFSNLELYG-SKLSHQPGSILGSTALIAGTTVGAGILALPAVTLPSGVVPSTVLLIAVWLYALVSGLLIAEVTLNTMRLVGRPSLGLLAMIERTLGKLGARFAGGAYLFLHYALLVAYVAQGGEILVSAVEKVLGVQ----NVLPAWVGTTAFTLLFGGIMYLGRERFVEKLNSAFVAIVLASFLGLLLLGTTQLKTSSFSFQNWSALPGAVSVMFVALFYHNVVPTVVTQLEGDAHKIRQSI 252          
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Aromatic (amino acid permease n=3 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A1Z4IEU0_9NOSO)

HSP 1 Score: 201 bits (510), Expect = 8.950e-59
Identity = 114/246 (46.34%), Postives = 164/246 (66.67%), Query Frame = 1
Query:    7 RLFSTLEPCDVSGFK--RKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAI 738
            RLFS LE   + G K   +P ++L + +LIAGT VGAGILALPA T+ +G++PS V LI +W+Y + + LLIAEV++N I  +G   VGL+A+ ++ LGK GAR  G  Y+F+HY+LLVAY+ QGG++L  +F  V+     GI+A+P W G   F L  G ++ F  E+F+   NS  V +V+ SFFGL+++G+G V+      QDWS + S V V+ +A+ +HNV+PVV TQLE D   +R +I
Sbjct:    8 RLFSRLE---IEGNKLTHQPGSVLGSTALIAGTTVGAGILALPAVTMPSGIVPSTVLLIAIWLYALISGLLIAEVSLNSIRIEGRLSVGLLAMVKRTLGKLGARIAGGAYLFLHYALLVAYVTQGGDILISAFAQVW-----GISAMPTWLGGTVFTLLFGSILYFGREKFIEKLNSAFVAIVITSFFGLLLLGAGQVKSGQFLVQDWSAVGSAVSVMLVALFYHNVVPVVVTQLEGDSRKIRHSI 245          
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: Tyrosine (transporter n=4 Tax=Nostocales TaxID=1161 RepID=A0A8J7DHV4_9CYAN)

HSP 1 Score: 199 bits (507), Expect = 3.770e-58
Identity = 111/244 (45.49%), Postives = 158/244 (64.75%), Query Frame = 1
Query:    7 RLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAI 738
            RLFS LE  D +    +P ++L + +LIAGT VGAGILALPA TL +G+LPS   LI +W+Y + + LLIAEV +N +  +G P VGL+A+ ++ LGK GAR  G  Y+F+HY+LLVAY+ QGGE+L  +   ++         LP W G   F L  GG++    E+F+   NS  VG+V++SF GL+++G G V+      Q+WS L S V V+ +A+ +HNV+PVV TQLE D+  +R +I
Sbjct:   14 RLFSHLE-FDGNKLNHQPGSVLGSTALIAGTTVGAGILALPAVTLPSGILPSTALLIAVWLYALVSGLLIAEVTLNAMHLEGRPSVGLLAIVQKTLGKQGARIAGGAYLFMHYALLVAYITQGGEILVSAIAKIWGVQ----NVLPTWVGTTTFTLLFGGIMYVGREKFIEKLNSAFVGIVIISFLGLLLLGGGQVKSAQFLFQNWSALGSAVSVMCVALFYHNVVPVVVTQLEGDVRKIRNSI 252          
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Match: tyrosine (transporter n=1 Tax=Alkalinema sp. FACHB-956 TaxID=2692768 RepID=UPI001688B5B2)

HSP 1 Score: 198 bits (504), Expect = 1.240e-57
Identity = 107/253 (42.29%), Postives = 165/253 (65.22%), Query Frame = 1
Query:    7 RLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAGLLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGKGGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSV--------FATAGSGITALPEWTGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQMNYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAII 741
            RLFS LE  +      +P ++L A +L+AGT +GAGILALP+ TL AG++PS + L++ W+Y V + LLIAEVN++++   G P +G +++ E  LGKGG+R  G  Y+F+HY+LLVAY+AQGGE+L  +   +         AT  + + A+P W G   F    GG++ +   + +  FN+ LV +V++SF GL+++  G VQ+     QDW+ LP  + V+ +A+ FHNVIPV+TTQLE D+  +++AI+
Sbjct:    5 RLFSNLELTE-GRLHHQPGSVLGATALVAGTTIGAGILALPSVTLPAGVIPSTIALLLAWLYAVVSGLLIAEVNLHMMRQSGVPTLGFLSMIELTLGKGGSRLAGAAYLFLHYALLVAYIAQGGEILLSAIAKLSAFIPIPPVATMATHLAAIP-WVGTALFTGLFGGILYWGRSQLIERFNNGLVAIVVMSFLGLLILAIGQVQIEQAIFQDWTALPPAISVMLVALFFHNVIPVITTQLEGDVQKIKRAIV 255          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig794.16097.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Tyrosine4.810e-15394.76Transport protein n=1 Tax=Ectocarpus siliculosus T... [more]
Tryptophan/tyrosine1.260e-7056.20permease family-domain-containing protein n=1 Tax=... [more]
Hypothetical3.380e-6948.18protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical2.150e-6448.58protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
tyrosine2.210e-5943.50transporter n=1 Tax=Anabaena sphaerica TaxID=21244... [more]
Tyrosine7.180e-5946.34transporter n=1 Tax=Anabaena sp. TaxID=1167 RepID=... [more]
Aromatic7.310e-5946.72amino acid permease n=4 Tax=Nostocales TaxID=1161 ... [more]
Aromatic8.950e-5946.34amino acid permease n=3 Tax=unclassified Nostoc Ta... [more]
Tyrosine3.770e-5845.49transporter n=4 Tax=Nostocales TaxID=1161 RepID=A0... [more]
tyrosine1.240e-5742.29transporter n=1 Tax=Alkalinema sp. FACHB-956 TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig794contigE_fasciculatus_S2_contig794:16..3820 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score443.4
Seed ortholog evalue7.2e-122
Seed eggNOG ortholog2880.D7FNA9
Model size744
KEGG koko:K03834
KEGG TC2.A.42.1.1
Hectar predicted targeting categorysignal anchor
Exons6
EggNOG free text desc.Tryptophan/tyrosine permease family
EggNOG OGs2QSPD@2759,COG0814@1
Cds size744
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig794.16097.1prot_E_fasciculatus_S2_contig794.16097.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig794 16..3820 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842454.2976625-CDS-E_fasciculatus_S2_contig794:15..501696842454.2976625-CDS-E_fasciculatus_S2_contig794:15..50Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig794 16..50 -
1696842454.3123205-CDS-E_fasciculatus_S2_contig794:866..10451696842454.3123205-CDS-E_fasciculatus_S2_contig794:866..1045Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig794 867..1045 -
1696842454.3248398-CDS-E_fasciculatus_S2_contig794:1541..16491696842454.3248398-CDS-E_fasciculatus_S2_contig794:1541..1649Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig794 1542..1649 -
1696842454.333672-CDS-E_fasciculatus_S2_contig794:2016..21501696842454.333672-CDS-E_fasciculatus_S2_contig794:2016..2150Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig794 2017..2150 -
1696842454.3428829-CDS-E_fasciculatus_S2_contig794:2768..28741696842454.3428829-CDS-E_fasciculatus_S2_contig794:2768..2874Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig794 2769..2874 -
1696842454.3565521-CDS-E_fasciculatus_S2_contig794:3638..38201696842454.3565521-CDS-E_fasciculatus_S2_contig794:3638..3820Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig794 3639..3820 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig794.16097.1

>prot_E_fasciculatus_S2_contig794.16097.1 ID=prot_E_fasciculatus_S2_contig794.16097.1|Name=mRNA_E_fasciculatus_S2_contig794.16097.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=248bp
MDRLFSTLEPCDVSGFKRKPTNLLSAASLIAGTAVGAGILALPAATLQAG
LLPSAVGLIMMWVYMVGTALLIAEVNVNVICSQGTPGVGLIALAEQALGK
GGARFTGLVYVFIHYSLLVAYMAQGGELLAESFNSVFATAGSGITALPEW
TGPVAFCLALGGLVLFFSEEFVASFNSVLVGVVLLSFFGLVVVGSGGVQM
NYLAEQDWSKLPSTVPVLFIAMVFHNVIPVVTTQLEVDMDIVRKAIIG
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mRNA from alignment at E_fasciculatus_S2_contig794:16..3820-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig794.16097.1 ID=mRNA_E_fasciculatus_S2_contig794.16097.1|Name=mRNA_E_fasciculatus_S2_contig794.16097.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3805bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig794:16..3820- (Ectocarpus fasciculatus EfasUO2)
ATGGACAGGCTATTTTCGACGCTGGAGCCGTGCGACGTGAGCGGGTTCAA GCGGAAGCCCACGAACCTGTTGAGTGCGGCCTCTCTGATAGCGGGCACGG CGGTTGGGGCGGGCATACTGGCTCTTCCCGCGGCCACGCTTCAGGCCGGG CTCTTGCCCAGTGCCGTCGGACTCATCATGATGTGAGAAGAACAGCCCCG CACGCCCACGATGTTGGCCTTGTTTTTGTCCTTGTGCCGCTGCGCACGCT CTTGTAGTGTCTGGCCGTACGATGCGATTGATTGATTGTCATGTTTCGCA AGATCGACCTTATTCGACCGGCTGCATGCGGCACAACGACGATTGATTTG TTGTAGGTATGTCCACCGAGATGCTTCAAGTAGAGCGCATCTCGACTTCC AGGAAAACTCATGTCGACCCCTTTAAATGGTCACACCCAGGTCTAATATC CTGGAATATGTGGGGGGGTACTCTTGCGTCTTACGCGAAACTTGAGCGAG ATTGCCCGTCGTGTGCATGTACCTTGTGTAAACAAATTTCGAGAGGGTAC TGTAATTCTGCGCTCGCTTATACACCAGCGGTGGGTGAGTGGTGCAGTCG GTACACTGCGAAACTTCCTGGCTCTGTTGTGGGTTTATGAGTTCGAATGT CTCCAGAGTCGAAAAAAATCGCAACCTAGCAGTGAAGCCTCGGGGTCGGT CGAAAATTCAACAAAGAACGAGGGAGGATTGTTACACGTGGTCAATGCAA CTGAACACAAGCACTACGGGAGGAAACATGAACATTTCCTTCTACAGCCC CGGGTAGTGCGTCAAACACGTACCCCATGGTGTAGGCGCCAGTCACTTAC ACGAAAAACAGTTGACATGCACATGCACCTGCTGGATCAGAATCTGCGAG AGACGGCTGAGACATGCTTTCCGACACTTTCCGACACTCTCGATAGGTGG GTGTACATGGTGGGTACGGCGTTGTTAATTGCGGAGGTGAACGTTAACGT CATCTGCTCGCAGGGCACGCCTGGAGTGGGCTTGATCGCCCTTGCAGAGC AGGTAATGACATGGATGGCATCGCACTTGCTGCCGCCGCTACGAGTGCGT TCATGTTGAGAGATGTTGGGCCTCTCAACTGTGGCAGACCCGGCTGCTAG TGCCCGCTGTTTTTGTATGCTAGCGTTTTGTGATTATGTCAATGTGCTTC CTGCTGTTGCGCGGAGCAACCTAATGGGAGGAATACGGTCGTGGAGTCGT TGGAAATGGTCACGCTCCCGCACGACTTCACCGGCCTCGAATGTGTACTG ATGGTCCCCGTACATGTAGCATCGTGGTGCACCTGCACGCACAACATCAT GATACAACCTATATTGGCTTGGCACGTCTGTGACTTGTGACGACTGGCGT TTTCCTGCGAGCCTCCCGGCGAGGTCATAAGCCGGTGAAACTTCCTCTTA TCTCAGCTAGCATGCCCTGAGAAGGAAGTTGTTGGCATCGCTCTGACGAG AGATAGGAAGGCAGGTTTCGCACGGTTCGTTGAGGAACACCGGAGAAAGT ACTCAGAGCATGCAAGAGTTGCTGCAACAATAGGACAGAGATGGATTTAA CTCTGTGCATCTGGTTGACTGGCTGCTTGCATACTGGGGGTTCGGCTGAC ATGCTCTCACTTCGTGGCAGGCTTTGGGAAAGGGCGGTGCAAGGTTCACC GGCCTCGTGTACGTCTTCATCCACTACTCCTTGCTCGTAGCCTACATGGC GCAGGGGGGTGAGCTCCTCGCCGAGAGCTTCAACAGTGTGTTCGCAACCG CGGGGTAAGTGTGTTGGGTTCTAGGTTTCGCTAAAGGAGTATTGGACCCC AGCGTGTGCGCGAAAAGGGTGATGACTATGAGTGTTCTGTTGATGCGGAG AAACGCATGTGTGTTGGCGGCTTGGCCTAGTCTTCATGTTTGGTGGCCGG AGTTGGAGTGGAATGAGGATCCAAGCGGTTCGTGATGTTGGTTACAACAC TGATATTGTTTTTCAAGTACCAGTTGGTTTCTGGGCTTTGTTGGAAGACG TCCTTCGCCAACGGAAGCTTAACGGCATGAAACACATCGCGCCACACTTT ATTCGTCTTTCCCACTCTTATTTTTTTTGTTTTTGCGGTTATTGTCTATG TCCTGTCTCGACGCCTTCAAGGTCAGGCATAACGGCATTGCCCGAGTGGA CGGGTCCTGTGGCCTTCTGCCTCGCCCTCGGTGGTTTGGTGCTATTCTTC AGCGAGGAATTTGTGGCATCTTTCAACAGGTTTGGGTTGTGTGTCTCTGG CGTGTGGGCCGGGACATACGGCCCCCGTGTGGGATCTGTTGTGGGTGTGA TTTTCTTCATGGAATGGTGTGCAATACAACCCAGCTTTATGCCGAACCTG CTGGGAGAACCACGTTTCCGTCTATCTGTATCTCCCTCTAGCGCTCGCTT TCCCCATGTTTGTCTCTTCTCTTCTCTTTCCGTATGTGTACATCCTTTAA AATCCGTCTCTCTCGGCATACTGCCGTGTGTTTCGTTGTGTTTTTTTAAG TGATGTTTCTCTAGTCTCCTTTGTTGTCTTTCTTTTGTGTCGCTCCTTCC CTCTGTCTGCCTGTCCCCTTCACCGAAAGACACCACTCCGAAGCAGCGTC GAATTTCGAGTTCCTGCGTGCGTTTGGTTCAGCTACAGTAAGTGAATCAT ACCAAGCGCTGCCGGCCCGTTTCAATGAAAAGCTTCACCACAACCCCAAT TGACGTCCGTATTCTCGCGATTCAGTGTCTTGGTGGGAGTGGTGCTATTA TCGTTCTTCGGCTTGGTGGTGGTGGGAAGCGGGGGCGTCCAGATGAACTA CCTCGCCGAACAAGACTGGAGCAAGCTGCCCTCCACAGTGCCGGTGCTGT TCATCGCCATGGTGTTCCACAACGTTATTCCGGTCGTCACGACCCAGCTT GAAGGTGAGAGGATACGAACAAAAACACCGACACAGCAGCCACCCTTCCA TGGGAGCTCTAATCACGTTGAAAGCGTGCGCTGCGTGTAATTTGCGTGTG CACCGGTACATTCGCACCGACGTCGACGGATCTCCACTCGCGAATACCCC CCTCACGCGTTCTACGCTGTGATAGGACTTGGCTCTTTTCACGGGTCTGT TGTGTGCTGCTTCAAAGGGTTGGATGTAGTGCTATTTATTCTTATTCCAG CGGTCGAACTTAATGTGTACACGTTGTTGATGACGCGGGAACGCCATAGA AGTATGGAACGCCCAAGAAAAAATATATATGGGCTTCGCACTGCCGCGCA CGTTCTGCTTGACAGTTCTGCAACGACTGTTCAGGCATCTATTATTTCCT TAGGCACTTCACCAAGTTGGCATTGGCAACAGATATTGCACGTTCATCGC CCCCGAGGTGATCGAAACCACTCCTTAGAGCAAGGCTCGTAGGCTGTGCC GTGGAAGAATCTCCGCGCTCGTCCAAACCCCTCTGCACCAATGCCATTGC TGTCGTGAGAGGACACAACTCGAAAGTGAGGCACGGGAATGAACGGACGG CTTGCGTGTTCGTTATTGGATTCGGCAACAATATGGGTTCACATTCCCGG CACGGACACAACTCAAAACGGAGGTCTTAAAAGAACCCCTCACCCTTGTA GAAATTGAATTTCAAACTCATACCACCCTCAAGCAACACCGTCGAATTTT CTTTCAACACTTCAACCAAACCGCAACCGGTGAATGCTTGGAACCTTTCC GTTTTTGTTTTCACTGGTAGTAGACATGGACATAGTTCGCAAGGCGATAA TCGGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig794:16..3820-

>mRNA_E_fasciculatus_S2_contig794.16097.1 ID=mRNA_E_fasciculatus_S2_contig794.16097.1|Name=mRNA_E_fasciculatus_S2_contig794.16097.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=744bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig794:16..3820- (Ectocarpus fasciculatus EfasUO2)
ATGGACAGGCTATTTTCGACGCTGGAGCCGTGCGACGTGAGCGGGTTCAA
GCGGAAGCCCACGAACCTGTTGAGTGCGGCCTCTCTGATAGCGGGCACGG
CGGTTGGGGCGGGCATACTGGCTCTTCCCGCGGCCACGCTTCAGGCCGGG
CTCTTGCCCAGTGCCGTCGGACTCATCATGATGTGGGTGTACATGGTGGG
TACGGCGTTGTTAATTGCGGAGGTGAACGTTAACGTCATCTGCTCGCAGG
GCACGCCTGGAGTGGGCTTGATCGCCCTTGCAGAGCAGGCTTTGGGAAAG
GGCGGTGCAAGGTTCACCGGCCTCGTGTACGTCTTCATCCACTACTCCTT
GCTCGTAGCCTACATGGCGCAGGGGGGTGAGCTCCTCGCCGAGAGCTTCA
ACAGTGTGTTCGCAACCGCGGGGTCAGGCATAACGGCATTGCCCGAGTGG
ACGGGTCCTGTGGCCTTCTGCCTCGCCCTCGGTGGTTTGGTGCTATTCTT
CAGCGAGGAATTTGTGGCATCTTTCAACAGTGTCTTGGTGGGAGTGGTGC
TATTATCGTTCTTCGGCTTGGTGGTGGTGGGAAGCGGGGGCGTCCAGATG
AACTACCTCGCCGAACAAGACTGGAGCAAGCTGCCCTCCACAGTGCCGGT
GCTGTTCATCGCCATGGTGTTCCACAACGTTATTCCGGTCGTCACGACCC
AGCTTGAAGTAGACATGGACATAGTTCGCAAGGCGATAATCGGA
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