mRNA_E_fasciculatus_S2_contig7938.16096.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7938.16096.1
Unique NamemRNA_E_fasciculatus_S2_contig7938.16096.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP24_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 8.420e-133
Identity = 215/245 (87.76%), Postives = 227/245 (92.65%), Query Frame = 1
Query:    1 MAPIA-VMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNSCRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
            MAP+A VMLSAAAVAVPMAGAFVVNPTTRSAFTRQS GAMRA+S YP+S+S   NSCRQ+TLRRHTHANLRCTAT+   EG TAA   TAA++ADQHALDPTLH+E+  AAE+DHFRD AYPQNKARWKKNTKQIATLGPASCT EQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIE KYKHPICILADLQGPKLRVGTFEHDTVNLV+GQMFRFDMDDEPGDAARVKLPHKEIIDTLQE
Sbjct:    1 MAPVAAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSLGAMRARSPYPTSTS---NSCRQQTLRRHTHANLRCTATSTA-EGSTAA---TAAVAADQHALDPTLHEED--AAEVDHFRDIAYPQNKARWKKNTKQIATLGPASCTEEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIEAKYKHPICILADLQGPKLRVGTFEHDTVNLVNGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 236          
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A097IU54_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 9.980e-119
Identity = 193/245 (78.78%), Postives = 209/245 (85.31%), Query Frame = 1
Query:    1 MAPIAVMLSAAAV-AVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNSCRQKTLRRHTHAN-LRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQ 729
            MAP+++MLSAAAV AVPMAGAFVVNP+  SAFTRQ++GAM+A+SS+P  S+SSS S RQ+TLRRHTH N LRCTAT                   DQHALDPTLHDEE G   +DHFRDFAYPQN ARWKKNTKQIATLGPASCT EQIEALFLAGVDVFRLNFSHG HD+KA+LVSIIR IETKYKHPIC+LADLQGPKLRVGTFEHDTV+LVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQ
Sbjct:    1 MAPVSMMLSAAAVVAVPMAGAFVVNPSAGSAFTRQTYGAMQARSSHPIGSASSSTSSRQRTLRRHTHTNNLRCTATVP-----------------DQHALDPTLHDEEVGGEPVDHFRDFAYPQNMARWKKNTKQIATLGPASCTMEQIEALFLAGVDVFRLNFSHGAHDEKAKLVSIIRTIETKYKHPICVLADLQGPKLRVGTFEHDTVHLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQ 228          
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IU45_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 6.830e-107
Identity = 174/241 (72.20%), Postives = 199/241 (82.57%), Query Frame = 1
Query:   10 IAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNSCRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
            +AVMLS +A AVPMA  FV NP+  S+FTRQ+ GA+RA+S+YP SS+   N+ RQ+T+RRHTH +L CTAT                   DQHALDPTLH++  GA E+D+F+DFAYPQNKARWKKNTKQIATLGPASCT +QIEALFLAGVDVFRLNFSHG H++KA+LV+ IR IETKYKHPICILADLQGPKLRVG FEHDTVNLVDGQMFRFDMDDEPGD+ARVKLPHKEIIDTL+E
Sbjct:    6 LAVMLSLSA-AVPMATGFVANPSAGSSFTRQTLGALRARSAYPGSSNG--NTSRQRTVRRHTHTSLHCTATVP-----------------DQHALDPTLHEDVGGAPEVDYFQDFAYPQNKARWKKNTKQIATLGPASCTKDQIEALFLAGVDVFRLNFSHGAHEEKAKLVTTIREIETKYKHPICILADLQGPKLRVGVFEHDTVNLVDGQMFRFDMDDEPGDSARVKLPHKEIIDTLRE 226          
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU1_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 9.570e-86
Identity = 148/181 (81.77%), Postives = 157/181 (86.74%), Query Frame = 1
Query:    1 MAPIA-VMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNS----CRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSI 528
            MAP+A VMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRA+  YPSSS          CRQ+TLRRHTHANLRCTATT   EG TAA   TAA++ADQHALDPTLHDEED AAE+DHFRDFAYPQNKARWKKNTKQIATLGPASCT EQIEALFLAGVDVFRLNFSHGDHDQK E+ ++
Sbjct:    1 MAPVAAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRARPHYPSSSXXXXXXXXXXCRQQTLRRHTHANLRCTATTTA-EGNTAA---TAAVAADQHALDPTLHDEED-AAEVDHFRDFAYPQNKARWKKNTKQIATLGPASCTEEQIEALFLAGVDVFRLNFSHGDHDQKGEVTTL 176          
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=2 Tax=Laminariales TaxID=2886 RepID=A0A097IU24_UNDPI)

HSP 1 Score: 268 bits (684), Expect = 9.960e-83
Identity = 158/252 (62.70%), Postives = 173/252 (68.65%), Query Frame = 1
Query:    1 MAPIAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGA------MRAQSSYPSSSSSSSNSCRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEED--GAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
            MAP+A+ L  +A  VPMAGAFV NP   S  TR   G        R+ ++YP S           T RR   A LRCTAT                   DQ  LD  +HD      A E DHFRDFAYP NKARWKKNTKQIATLGPASCT EQIEALFLAGVDVFRLNFSHG H++KA LV+IIR IE K+KHPIC+LADLQGPKLRVG F+ DTVNLVDGQ+FRFDMDDEPGDAARVKLPHKEIIDTL+E
Sbjct:    1 MAPLALGLMLSASVVPMAGAFVANPAAISIVTRAMGGLGGAIQPTRSNTAYPVS----------WTGRR---AALRCTATLP-----------------DQTKLDAAIHDSSAVIAAEEFDHFRDFAYPANKARWKKNTKQIATLGPASCTFEQIEALFLAGVDVFRLNFSHGAHEEKANLVTIIRDIEAKFKHPICVLADLQGPKLRVGVFDKDTVNLVDGQLFRFDMDDEPGDAARVKLPHKEIIDTLKE 222          
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IU52_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 1.470e-82
Identity = 151/242 (62.40%), Postives = 171/242 (70.66%), Query Frame = 1
Query:    7 PIAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNSCRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
            P+A+M S A    P+A AFV NP+  SA  R++ G MRA                  T  R    +L    T        +     A+  ADQH LDPT+H+E DGA E+DHFRD+A+P NKARWKKNTKQIATLGPAS T EQIE LFLAGVDVFRLNFSHG H++KAELV +IR IE KYKHPICILADLQGPKLRVG F  D+V+LVDGQMFRFDMDDEPGDAARV+LPHKEIIDTLQE
Sbjct:    4 PLALMFSMAVA--PIATAFVANPSG-SAIARRTVGDMRA------------------TAARARPRSLPSRRTALYSAAPASVSAAAASTVADQHKLDPTVHNEVDGALEVDHFRDYAFPLNKARWKKNTKQIATLGPASRTFEQIERLFLAGVDVFRLNFSHGAHEEKAELVQVIREIEAKYKHPICILADLQGPKLRVGVFGKDSVHLVDGQMFRFDMDDEPGDAARVQLPHKEIIDTLQE 224          
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=5 Tax=Sargassum TaxID=3015 RepID=A0A097IU41_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 3.410e-77
Identity = 146/244 (59.84%), Postives = 169/244 (69.26%), Query Frame = 1
Query:    1 MAPIAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSSSSSNSCRQKTLRRHTHANLRCTATTXXXEGGTAAXXXTAAMSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
            MAP++++  A  VA+P+AGAFVVNP + S   RQ+ G +R +   P +            L R       CTAT                     H LDPTL +   G  E+DHF+DFAYP NKARWKK TKQ+ATLGPAS T EQ+EALFLAGVDVFRLNFSHG H++KAELV  IR +E KYKHPICILADLQGPKLRVG FE D+VNLVDGQMFRFDMDDEPGDAARVKLPH+EII+TL+E
Sbjct:    1 MAPLSLVFCA--VALPVAGAFVVNPAS-SVIARQTAGDLRGR--LPRTG--------PLRLGRRVCTTPSCTATV--------------------HELDPTLREPVGGEPEVDHFKDFAYPANKARWKKFTKQVATLGPASRTFEQLEALFLAGVDVFRLNFSHGVHEEKAELVKTIREVEAKYKHPICILADLQGPKLRVGVFEKDSVNLVDGQMFRFDMDDEPGDAARVKLPHEEIINTLRE 211          
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IU61_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 1.960e-73
Identity = 117/152 (76.97%), Postives = 129/152 (84.87%), Query Frame = 1
Query:  271 MSADQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTL 726
            ++ D H LDPTLHD+ +GA EID FRD+AYP NK RWKKNTKQ+ATLGPAS T EQIEALFLAGVDVFRLNFSHG HD+KAELV  IR +E KYKHPICILADLQGPKLRVG F+ D V L DGQ+FRFDMDD PGD  RV+LPH+EIIDTL
Sbjct:   63 VTVDTHKLDPTLHDDGEGAPEIDFFRDYAYPANKMRWKKNTKQVATLGPASRTFEQIEALFLAGVDVFRLNFSHGQHDEKAELVLTIRRVEAKYKHPICILADLQGPKLRVGVFQGDKVTLADGQLFRFDMDDTPGDDTRVQLPHREIIDTL 214          
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IU63_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 3.560e-73
Identity = 117/151 (77.48%), Postives = 127/151 (84.11%), Query Frame = 1
Query:  280 DQHALDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQE 732
            D H LDPTLHD  DG  E+D+F+D+AYP NK RWKKNTKQIATLGPASCT EQIE LFLAGVDVFRLNFSHG HD+KA+LV +IR +E KYKHPICILADLQGPKLRVGTFE D V LV+GQ FRFDMD+E GDA RV LPH EII TL E
Sbjct:   79 DSHTLDPTLHDPRDGEKEVDYFKDYAYPANKMRWKKNTKQIATLGPASCTKEQIEELFLAGVDVFRLNFSHGAHDEKAKLVLLIREVEAKYKHPICILADLQGPKLRVGTFEKDKVTLVEGQTFRFDMDEELGDAGRVMLPHPEIIYTLSE 229          
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Match: Pyruvate (kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA73_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.190e-58
Identity = 101/145 (69.66%), Postives = 114/145 (78.62%), Query Frame = 1
Query:  292 LDPTLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEALFLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLRVGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTL 726
            +DP   D    A E D F D A+  NK RWKK TKQ+ATLGPAS + E IEALFLAG DVFRLNFSHG HD+KA+LV +IR +ETKY+HPIC+LADLQGPKLRV  FEHD V +V GQ FRFDM+DEPGDA RVKLPH EII+TL
Sbjct:   67 MDPAKVD----ATEPDPFADEAFATNKPRWKKKTKQVATLGPASSSLEMIEALFLAGADVFRLNFSHGAHDEKAKLVELIREVETKYRHPICVLADLQGPKLRVDVFEHDKVTVVQGQQFRFDMEDEPGDARRVKLPHPEIINTL 207          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7938.16096.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Pyruvate8.420e-13387.76kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
Pyruvate9.980e-11978.78kinase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A09... [more]
Pyruvate6.830e-10772.20kinase n=1 Tax=Punctaria latifolia TaxID=90013 Rep... [more]
Pyruvate9.570e-8681.77kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=8... [more]
Pyruvate9.960e-8362.70kinase n=2 Tax=Laminariales TaxID=2886 RepID=A0A09... [more]
Pyruvate1.470e-8262.40kinase n=1 Tax=Desmarestia viridis TaxID=62313 Rep... [more]
Pyruvate3.410e-7759.84kinase n=5 Tax=Sargassum TaxID=3015 RepID=A0A097IU... [more]
Pyruvate1.960e-7376.97kinase n=1 Tax=Dictyopteris undulata TaxID=156997 ... [more]
Pyruvate3.560e-7377.48kinase n=1 Tax=Ishige okamurae TaxID=233772 RepID=... [more]
Pyruvate1.190e-5869.66kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7938contigE_fasciculatus_S2_contig7938:2757..7007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score399.1
Seed ortholog evalue1.6e-108
Seed eggNOG ortholog2880.D8LP24
Model size741
KEGG rclassRC00002,RC00015
KEGG koko:K00873
KEGG ReactionR00200,R00430,R01138,R01858,R02320
KEGG Pathwayko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230
KEGG ModuleM00001,M00002,M00049,M00050
Hectar predicted targeting categorychloroplast
GOsGO:0000003,GO:0000287,GO:0003006,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006629,GO:0006631,GO:0006633,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009791,GO:0009987,GO:0010035,GO:0010038,GO:0010154,GO:0010431,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0021700,GO:0022414,GO:0030955,GO:0031420,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046686,GO:0046700,GO:0046872,GO:0046939,GO:0048316,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0061458,GO:0071695,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
Exons5
EggNOG free text desc.pyruvate kinase activity
EggNOG OGsCOG0469@1,KOG2323@2759
EC2.7.1.40
Cds size741
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842454.2138655-CDS-E_fasciculatus_S2_contig7938:2756..28771696842454.2138655-CDS-E_fasciculatus_S2_contig7938:2756..2877Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7938 2757..2877 +
1696842454.2284927-CDS-E_fasciculatus_S2_contig7938:3947..42251696842454.2284927-CDS-E_fasciculatus_S2_contig7938:3947..4225Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7938 3948..4225 +
1696842454.2393901-CDS-E_fasciculatus_S2_contig7938:5179..52961696842454.2393901-CDS-E_fasciculatus_S2_contig7938:5179..5296Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7938 5180..5296 +
1696842454.25023-CDS-E_fasciculatus_S2_contig7938:6223..63311696842454.25023-CDS-E_fasciculatus_S2_contig7938:6223..6331Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7938 6224..6331 +
1696842454.2585418-CDS-E_fasciculatus_S2_contig7938:6890..70071696842454.2585418-CDS-E_fasciculatus_S2_contig7938:6890..7007Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7938 6891..7007 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7938.16096.1prot_E_fasciculatus_S2_contig7938.16096.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7938 2757..7007 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7938.16096.1

>prot_E_fasciculatus_S2_contig7938.16096.1 ID=prot_E_fasciculatus_S2_contig7938.16096.1|Name=mRNA_E_fasciculatus_S2_contig7938.16096.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=247bp
MAPIAVMLSAAAVAVPMAGAFVVNPTTRSAFTRQSWGAMRAQSSYPSSSS
SSSNSCRQKTLRRHTHANLRCTATTTTTEGGTAATAATAAMSADQHALDP
TLHDEEDGAAEIDHFRDFAYPQNKARWKKNTKQIATLGPASCTAEQIEAL
FLAGVDVFRLNFSHGDHDQKAELVSIIRVIETKYKHPICILADLQGPKLR
VGTFEHDTVNLVDGQMFRFDMDDEPGDAARVKLPHKEIIDTLQEVS*
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mRNA from alignment at E_fasciculatus_S2_contig7938:2757..7007+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7938.16096.1 ID=mRNA_E_fasciculatus_S2_contig7938.16096.1|Name=mRNA_E_fasciculatus_S2_contig7938.16096.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4251bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7938:2757..7007+ (Ectocarpus fasciculatus EfasUO2)
ATGGCTCCTATCGCCGTGATGCTCTCAGCTGCGGCTGTGGCAGTGCCAAT GGCGGGTGCCTTCGTGGTAAACCCCACAACAAGGTCGGCGTTCACGAGGC AAAGTTGGGGAGCGATGCGAGGTGGGTGGTGTGCAACTTGCTGCTGCGTG TGTATCTGTGTTGTTTGTGTTGGTGTGGAAAGGAGAAGCTTCCGTTGGCA GCATGATGAACGAGAGTTGTTGCCGGAACCGTGCATTCCGCAGAGCCTGT TTTGTAGCCTTGCAGATGCGACAGATCTTGCAGTTTGTGTCCCCGGGGGG AAGACGCAGGGACGTTTGCGACACGTGGGTAGCATTGGCGGCAGCCTCCT AGTTAGAACTGCTCTCTGCCCAATCGATTCACCAACTATGGTTTCAGGTC ACGGCGGAGCTGCTTGACTTCTTGCGCGTATAAAGGAGAGGTGCTTTGCA AAATGTTGCAGTTCACGACACGCGTTGCACAACCCTTGCGCGTCTTTGCG GCTTCTTTGACCGGCCAACGGCCGCCTTCTCTCTCTCTGCCCTCTACTCC TGCACGCGGTCTCTCGAGATTGCTGTCTCGTCCCTTGCTAAAGTCGTGCA GATCGCCGCTCTTTCGTTGCCACGCGTAGCGCGTACGACGCCAACACTCT CAAGAACACCCCCCCCCGTCAGACTCAAAAAGTGGTCTCCAGAAACGAAA TAACGTCTTTCGGCGCATCCTTCCCCGCCAGCCAGCTCCCCATAACTTAC TTCAATCGTGTCGCCGTCGAGCGAATACAAGCGCCGATGGACAGGAAATG AACAGAGTGGATCCCTTTCGAGGCCGAACACCGCTTCTATTGATAGACGA AATAGTTGAGAAACCGCAAACATTCTGGCGCTTCGATTACAGCAGTGAAC TAACTCTCTCTCTCTGGTCGAGCATGCACATCCCCTTTACCTGTGGGGAG AGGGAACGCTTTCATTGTTGGTGATTGGCGGAGTCATTTGAGCAGCGTTC CCCGCTTGTTTCTTTTAGGACGGGGCATGTCTTTCCCGCTCTGATCTTGG GCACCGCCACCATTCATTCCCGATCTCTCTCTCTCTCTCTCTCTTCGCAC TGCTTTAAGGTATTTAATGAAAAATGTTGTTGCTTCTCTTCCTGTCGTCT CCTCTCCCTGCCTGGTGTCTCGGCGATTTTTTTCCGCGCAGCGCAATCCT CCTACCCTAGCAGCAGCAGCAGCAGCAGCAACAGCTGTCGACAGAAGACC CTGCGCAGGCACACGCACGCCAACCTGCGGTGCACGGCCACAACAACCAC CACGGAGGGGGGCACCGCCGCCACAGCTGCCACAGCTGCGATGTCGGCCG ACCAGCACGCCCTAGACCCCACCCTCCACGACGAGGAGGATGGGGCCGCC GAGATCGACCACTTCCGGGATTTTGCGTACCCGCAGAACAAGGCGCGATG GAAGAAGAACACCAAGCAGGTGTGTTTGTTTTACAGGCGGTACTAGCGGG TCGAATATTCAAGAGGTAAGGTGTGTGTGTTTTACAGGCGGTACTAGCGG GTCGAAATATTCAAGAGGTAAGGTGTAAGGTGTGTGTGTGCCTTAGAAGC GTTGTTTCGATTCTTGTGGGGTGGTGTCGGTGACACGTACATGCAATATC ATCGGAAGAAGGAAGACTTGGGACTTTGTTTTGGAAGCACTTTTTGGGTG CTTCTTTGCGGCGATGTTGTGACGATCGTCACCTCATTGCCCCACGAGAG CGAGTAGCGAAGCCACCTACTGCTGCTGCTGCTAGATGCTGCTGCTAGAT GCTGCTGCTGCGGCTGCTGCTGCTGTGCAAGGCGTTGGGGCGTTTGTTGG TGTCTGTCTTGCGTATGCGAAGGTTGCCGTACCGCATGGCGGCGAGAGTA GTTGCGTGCGTGCCATCGAACGTGCTGCTTGTGTCCTCTCCTGCGCTCCT CCGAGAGCAAACGTTCGATCTGTACGGGCGGGGGTGCTCAAAGAGTTTTC GGAGCACGGGCTGCTCGTTGTAGCGCACTTGCAAGTGGTCTAATCGGCTG TTGTGCATTCTAAACCTGGGCCGTGCCGCAGCGGTACGGTTGTTTTTTTT CTCTCACGTGTGTGCCGTGTCACCTACGCTGCTGCGTCGTAGCATAGATA CTGCTGTGTGGCATCGTTTCTCCCTCGGCCTTGCTCTGCTTCGTTGCACT ATCATACTCTCCGAACCACCTCCTCCCCGTCTCTTAGTGTCATAATGTGA TCCACCCCCATGTCCGTCCAACCAGAGGATTCAGTACCTTCTTCCCCCGA CACCCATCGTCTCTTGTCCCTTGGCATGCCTGCCTGCCTGCCTGCCTGCC TGCCTGCCTGGGTTGACGCGGTTTCCCTCTGTTATTTCGTTCGTTCTTTT CCTGTCGTGTGCGAGAACCGCAGATCGCCACCTTGGGGCCGGCGTCCTGC ACGGCGGAGCAGATCGAGGCGCTCTTCCTCGCCGGCGTGGACGTCTTCCG TCTAAACTTTTCGCACGGCGACCACGACCAGAAGGCCGAGGTGACAACCC TGACAACCCTAGCTAACGCTTGCCACGCTTTCGCCTTGTGCTGAATGACG ATAGCGCTTTCAGAACCTCACCTATCGTTGATGGTGCTCTGTGCTTAGGT CACGCGTCGAGGGCTGCAGATTTTGGGTGGGTGGGTGGGGGGGTGGGGGG CAGGGGGAGGAAGGGTGCCAGCCAGGTGATGGGGACGACCATTTCTGTTG CGGTGTAGCACAAGCTCTTGGCAGCACGGACGGTGCAGCAGCTGTGGTTC TTCTCAACGTTTCTTTTTTTTAAGTCTGGGACCGTATGGTTTGGATTGGT TGAGGGGAGAAGACAAGACAAGCGAGGTGCTTTTCTTGGCTGACTAGATA GAGTCGTGGCTCTGATATAAGCGGGGGATCTGGTATAAGAGGGGGATCTG ACATAAGAGGGTCGAAGTCGGTTGTCACGACCCTAGTATAAAAGTTGGTA CTTTCCTTTTCCGGACTTTCCTATTCGGTATACGAGGGAGATCCGATACA AGAGGGTGGAGGACCTTTGTCGCAGCACCCTCTTCTCTTATATCGGAGCC ACGACTGTACCGGATACGACGCCAAGGCCGGCTGTACTGGAACCCTCAAC GTATATGGCCCCGAGTGGTCTAATGTAGCGTATTGTAGGATTGCGTGGTC TTGGAGAGTGGAGGACGTTACGCTTACGATGCCTCTTTGTTAATCTATTT GTACAAATCATGTATCAGGCGAATATACCAGCAGCAGTAGTGCATGCATC CACCATTTCGATTTCACGCACGCACACACATGAGCACGCCTCCTGCTGTT TCTCTCATCGATAAGCTGTCGTCACATGGCTAAGGCTAAGGCTAAGCCCT CCCCGCTTCTCCACGGCTGTCTGTTGCGCTCTCCCAACCGCCGGCGGCAA TGAATGTTACATTGCAGTTGGTGTCGATTATCCGGGTGATCGAGACCAAG TATAAGCACCCCATCTGCATCCTCGCGGACCTACAGGGGCCCAAGCTCCG CGTCGGGACATTCGAACACGACACGGTAAATATCTAGCGTCTATAAATAC CGACGCTGTTTGTTGTTGATGATTGTATTGTAGCTGAATCATCTTACATC TACAACGACCGAAATGACAGGCTGTAACGACACCCCTTGTGCTGTAGATG CATGACAACACTTACAGCGGCCGTATTTGACACACCACTAGAACTGCTGT ATGGCATGGGCACGAAACCGTACTTGAGGAACGAGGGAAATGAGTGAACC GTGCTGTACTCCGACAGATTAGCAGGTAGCGGTAGCATGGCATGCTCTTC GGAGGATAGGGGGAGGGAATTGCTGCGGCGGTTCGAACCCGCCAGCCCGT TTCTTTTTCCGTGGACGGACCAATCCAACGCACCACGTTTGTACAAGGTG GAAAGCTTGCCACCCGTCTATGTCTATCCGTCCACCCCAACCTCGTACCC CCCGCTCTTGCTTACTCGAAAAATAATCAATCCAAGATACATCCACCTTC GTCTGAAAATTAATGCATGCACGGACGCACCGATTTGCACCCGCTGTGGG TGCGATGATGACGGTTTCATGGTTTCTATTACAGGTGAACCTGGTGGACG GTCAGATGTTCCGGTTCGACATGGACGACGAGCCCGGAGACGCTGCCCGC GTCAAGCTCCCCCACAAGGAGATCATCGACACCCTCCAGGAGGTGAGTTG A
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7938:2757..7007+

>mRNA_E_fasciculatus_S2_contig7938.16096.1 ID=mRNA_E_fasciculatus_S2_contig7938.16096.1|Name=mRNA_E_fasciculatus_S2_contig7938.16096.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=741bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7938:2757..7007+ (Ectocarpus fasciculatus EfasUO2)
ATGGCTCCTATCGCCGTGATGCTCTCAGCTGCGGCTGTGGCAGTGCCAAT
GGCGGGTGCCTTCGTGGTAAACCCCACAACAAGGTCGGCGTTCACGAGGC
AAAGTTGGGGAGCGATGCGAGCGCAATCCTCCTACCCTAGCAGCAGCAGC
AGCAGCAGCAACAGCTGTCGACAGAAGACCCTGCGCAGGCACACGCACGC
CAACCTGCGGTGCACGGCCACAACAACCACCACGGAGGGGGGCACCGCCG
CCACAGCTGCCACAGCTGCGATGTCGGCCGACCAGCACGCCCTAGACCCC
ACCCTCCACGACGAGGAGGATGGGGCCGCCGAGATCGACCACTTCCGGGA
TTTTGCGTACCCGCAGAACAAGGCGCGATGGAAGAAGAACACCAAGCAGA
TCGCCACCTTGGGGCCGGCGTCCTGCACGGCGGAGCAGATCGAGGCGCTC
TTCCTCGCCGGCGTGGACGTCTTCCGTCTAAACTTTTCGCACGGCGACCA
CGACCAGAAGGCCGAGTTGGTGTCGATTATCCGGGTGATCGAGACCAAGT
ATAAGCACCCCATCTGCATCCTCGCGGACCTACAGGGGCCCAAGCTCCGC
GTCGGGACATTCGAACACGACACGGTGAACCTGGTGGACGGTCAGATGTT
CCGGTTCGACATGGACGACGAGCCCGGAGACGCTGCCCGCGTCAAGCTCC
CCCACAAGGAGATCATCGACACCCTCCAGGAGGTGAGTTGA
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