mRNA_E_fasciculatus_S2_contig7907.16072.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7907.16072.1
Unique NamemRNA_E_fasciculatus_S2_contig7907.16072.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7907.16072.1 vs.
Match: Cilia- (and flagella-associated protein 157 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E0_ECTSI)

HSP 1 Score: 989 bits (2556), Expect = 0.000e+0
Identity = 579/698 (82.95%), Postives = 601/698 (86.10%), Query Frame = 1
Query:    4 EDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTSKIEELEIRRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQSTVENDLNAERRKKLQEKQRVRTQVEEEIMKLSSELFSKKASCQEVELADKTVRAKDNNEKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASEVVLHKRVRLYHDLVISLKARLEQEACDDDAEDDDISDGQELADLEESLASXXXXXXXXXXXXXX--VSCLETLSSTSDTPPSAQVVWAGGACGALAYESVDELRVAVESLQRLHAELREEARGLTARIDEAVDTAPAAGTEGDGGRETEDPVVSCLLEAAEEWTATALASRPARPGKEPGGICGGGKEEGPPMLLL--------PSSASGRALSVRGLPGDHSGAT--NNNXXXXXTGANGHRYNLRSGGGNRGKTAGSXXXXXXXXXXTDSSRSGKRGSVATARGGSTLANQQRQQSPSPSPCAARTGGGRDGGALATATKTPLRRRELFYHLVDAFREYQTRRTGQHVGDGAVGVDSDRLPDGKERGRKGATETGTTTAEAGGLDGGGSSVSTEFPPVGVSFGDGGDLHSASDGLSASVRTLCDFGPPDCHSVSTQTVAKHFPEKFASVRPARRLVVNSTFLTSHSTVTNSVLSASTVRSWGYGAASFDSQTDRRV 2061
            EDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYT +IEELE RRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLE EIETTQ T ENDLN ERRKKLQEKQRVRTQVEEEIM LSSELFSKK    EVELADKTVRAKDNN+KLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASE VLHKRVRLYH+LVISLKARLEQEACDDDAEDDD+SDGQELA+LEESLASXXXXXXXXXXXX    VSCL+TLSSTSDTP SAQV+WAGGACGALAYESVDELRVAVESLQRLH ELREEA  LT RI+EAVD+APAAGTEG  GR+TEDPVVSCL+EAAEEW A ALASRPARPG+E   I G                    P+SAS R  SVRG PGDHSGAT  NNN     TGA   RYNLRSG G RGKTA             DSSRSGKRG+VATARGGS LANQ+R+Q+PSPSPC   +GGGRDGGALA ATKTPLRRRELFYHLVDAFREYQ RRT QHVGDGAV V SDRLP G+E G+KG   TGTT AEAGG DGGGS+ STEFPPVGVSFGD GDLHSASDGLSASVRTLCDFGPPDCHSVSTQTVAKHFPEKFASVRPARRLVVNSTFLTSHSTVTNSVLSASTVRSWGYGAASFD QTDRR+
Sbjct:   65 EDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTRQIEELEARRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLECEIETTQFTFENDLNTERRKKLQEKQRVRTQVEEEIMTLSSELFSKK----EVELADKTVRAKDNNDKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASEEVLHKRVRLYHELVISLKARLEQEACDDDAEDDDVSDGQELAELEESLASXXXXXXXXXXXXDDTTVSCLDTLSSTSDTPSSAQVIWAGGACGALAYESVDELRVAVESLQRLHTELREEASRLTVRIEEAVDSAPAAGTEGGRGRDTEDPVVSCLIEAAEEWMAAALASRPARPGEERDRIGGXXXXXXXXXXXXXXXXXXXXPASASRRERSVRGSPGDHSGATTPNNNI----TGAIDRRYNLRSGSGKRGKTA-------------DSSRSGKRGAVATARGGSALANQRRKQTPSPSPCTTPSGGGRDGGALAAATKTPLRRRELFYHLVDAFREYQRRRTSQHVGDGAVDVGSDRLPGGEEWGQKGVPGTGTTAAEAGGPDGGGSNASTEFPPVGVSFGDDGDLHSASDGLSASVRTLCDFGPPDCHSVSTQTVAKHFPEKFASVRPARRLVVNSTFLTSHSTVTNSVLSASTVRSWGYGAASFDGQTDRRL 741          
BLAST of mRNA_E_fasciculatus_S2_contig7907.16072.1 vs.
Match: Cilia- (and flagella-associated protein 157 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR66_9PHAE)

HSP 1 Score: 945 bits (2443), Expect = 0.000e+0
Identity = 556/692 (80.35%), Postives = 585/692 (84.54%), Query Frame = 1
Query:    4 EDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTSKIEELEIRRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQSTVENDLNAERRKKLQEKQRVRTQVEEEIMKLSSELFSKKASCQEVELADKTVRAKDNNEKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASEVVLHKRVRLYHDLVISLKARLEQEACDDDAEDDDISDGQELADLEESLASXXXXXXXXXXXXXX--VSCLETLSSTSDTPPSAQVVWAGGACGALAYESVDELRVAVESLQRLHAELREEARGLTARIDEAVDTAPAAGTEGDGGRETEDPVVSCLLEAAEEWTATALASRPARPGKEPGGICGGG--KEEGPPMLLLPSSASGRALSVRGLPGDHSGATNNNXXXXXTGANGHRYNLRSGGGNRGKTAGSXXXXXXXXXXTDSSRSGKRGSVATARGGSTLANQQRQQSPSPSPCAARTGGGRDGGALATATKT---PLRRRELFYHLVDAFREYQTRRTGQHVGDGAVGVDSDRLPDGKERGRKGATETGTTTAEAGGLDGGGSSVSTEFPPVGVSFGDGGDLHSASDGLSASVRTLCDFGPPDCHSVSTQTVAKHFPEKFASVRPARRLVVNSTFLTSHSTVTNSVLSASTVRSWGYGAASFDSQTDRR 2058
            EDQSD+YYYLHKKLDDNYDVISALQRQLM+ETADREKAEKEYT +IE+LE RRDE LGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQST ENDLN ERRK+LQEKQRVRTQVEEEIM LSS+LFSKK    EVELADKTVRAKDNNE LHAALQAKAKQAE+MMVMNQGLIFENR LRNDLDLAEASE VLHKRVRLYHDLVISLKARLEQEACDDDAEDDD+SDGQELA+LEESLASXXXXXXXXXXXX    VSCLETLSSTS TP SAQV+WAGGACGALAYESVDELRVAVESLQRLHAELREEA  LTARI+E  D+ P AGTEG  GR+TEDPVVSCLLEAAEEW A A+ASRPARPG+E   I GGG  + EGPP+ LLP+ AS R  SVRG PGDHSGATN N      GA   RYNLRSG GNRGKTA             DSSR+GKR SVATARGGS L NQ+ +QSPSPSPC+  +G                 P RRRELFYHLVDAFREYQ R+  QH+GDGAVGVDSDRLP G+E G+KG   T TTTAEAGG DGGGS+ STEFPPVGVSFGDGGDLHS SDGLSASVRTLCDF PPDCHSVSTQTVAKHFPEKFASVRPARRLVVNSTFLTSHSTVTNSVLSASTVRSWGY A S D Q+DRR
Sbjct:    8 EDQSDIYYYLHKKLDDNYDVISALQRQLMIETADREKAEKEYTRQIEQLEARRDEVLGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQSTFENDLNTERRKQLQEKQRVRTQVEEEIMTLSSDLFSKK----EVELADKTVRAKDNNENLHAALQAKAKQAERMMVMNQGLIFENRGLRNDLDLAEASEEVLHKRVRLYHDLVISLKARLEQEACDDDAEDDDVSDGQELAELEESLASXXXXXXXXXXXXDDTTVSCLETLSSTSGTPCSAQVIWAGGACGALAYESVDELRVAVESLQRLHAELREEASRLTARIEETADSFPTAGTEGGRGRDTEDPVVSCLLEAAEEWMAAAMASRPARPGEEGDRIGGGGGNEREGPPVPLLPAPASRRERSVRGSPGDHSGATNPNNNNI--GAIDRRYNLRSGSGNRGKTA-------------DSSRNGKRESVATARGGSALENQRTKQSPSPSPCSPLSGXXXXXXXXXXXXXXXXXPRRRRELFYHLVDAFREYQRRKASQHIGDGAVGVDSDRLPGGEEWGQKGVPGTQTTTAEAGGPDGGGSNASTEFPPVGVSFGDGGDLHSPSDGLSASVRTLCDFRPPDCHSVSTQTVAKHFPEKFASVRPARRLVVNSTFLTSHSTVTNSVLSASTVRSWGYDAVSSDGQSDRR 680          
BLAST of mRNA_E_fasciculatus_S2_contig7907.16072.1 vs.
Match: Cilia- (and flagella-associated protein 157 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FVL0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.610e-8
Identity = 60/224 (26.79%), Postives = 117/224 (52.23%), Query Frame = 1
Query:    4 EDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTSKIEELEIRRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQSTVENDLNAERRKKLQEKQRVRTQVEEEIMKLSSELFSKKASCQEVELADKTVRAKDNNEKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASEVVLHKRVRLYHDLVISLKARLEQE 675
            ED++D+YYYLHKKLD NY+VI+ L+  +     +R+  +K +  K +E +    +E   L E++ + E+ L+ +    + K   +   A +ES +   +   +  +    R+ +QEK+R++  +  +I +    L ++     E +L   T R    N+++ + LQ ++K+ E+++V  + L  E   LR  L + + +EV + KR   Y  L+  L  R++ +
Sbjct:   79 EDEADIYYYLHKKLDANYEVIAQLESDIQTVKLERDAMDKAFHIKQDETQDAFAKEKKELTERIESAEDTLHALEVFRERKIVLEDTIAAMESTLAAEKDNHKKQVVEMERRNVQEKERIKKDMLMKIKENKQNLLART----EDQLDTTTKRTMMENDQMISELQYQSKETEKLLVKYKALETEVVHLRLQLKVNKDTEVEMAKRTHFYQKLIKKLNERVQSD 298          
BLAST of mRNA_E_fasciculatus_S2_contig7907.16072.1 vs.
Match: Cilia- (and flagella-associated protein 157 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6T9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.470e-8
Identity = 61/235 (25.96%), Postives = 121/235 (51.49%), Query Frame = 1
Query:    4 EDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTSKIEELEIRRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQSTVENDLNAERRKKLQEKQRVRTQVEEEIMKLSSELFSKKASCQEVELADKTVRAKDNNEKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASEVVLHKRVRLYHDLVISLKARLEQEACDDDAEDDDI 708
            ED++D+YYYLHKKLD NY+VI+ L+  +    A+R+  ++    +    E    +E   L E++ + E+ L+ +    + K   +   A +E+ + T + +    ++   R+ +QEK+R++  +  +I +    L ++     E +L   T R    N+++ + LQ ++K+ E+++V  + L  E   LR  L L + +E  + KR   Y  L+  L  R++ +     A+ D++
Sbjct:   89 EDEADIYYYLHKKLDANYEVIAQLEADIQTAKAERDAMDRTLRQQASAQEDAFAKEKKELTERIESAEDTLHALEVFRERKVALEDTIAAMETTLATEKESHVKQVHEMERRNVQEKERIKKDMLMKIKENKQNLLART----EDQLHTTTKRTMMENDQMISELQYQSKETEKLLVKYKALEGEVVHLRLQLKLNKETEAEMAKRTHFYQKLIKKLNERVQSDQVAARAQADEL 319          
BLAST of mRNA_E_fasciculatus_S2_contig7907.16072.1 vs.
Match: Cilia- (and flagella-associated protein 157 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUP4_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.490e-8
Identity = 60/224 (26.79%), Postives = 117/224 (52.23%), Query Frame = 1
Query:    4 EDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTSKIEELEIRRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQSTVENDLNAERRKKLQEKQRVRTQVEEEIMKLSSELFSKKASCQEVELADKTVRAKDNNEKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASEVVLHKRVRLYHDLVISLKARLEQE 675
            ED++D+YYYLHKKLD NY+VI+ L+  +     +R+  +K +  K +E +    +E   L E++ + E+ L+ +    + K   +   A +ES +   +   +  +    R+ +QEK+R++  +  +I +    L ++     E +L   T R    N+++ + LQ ++K+ E+++V  + L  E   LR  L + + +EV + KR   Y  L+  L  R++ +
Sbjct:   79 EDEADIYYYLHKKLDANYEVIAQLESDIQTVKLERDAMDKAFHIKQDETQDAFAKEKKELTERIESAEDTLHALEVFRERKIVLEDTIAAMESTLAAEKDNHKKQVVEMERRNVQEKERIKKDMLMKIKENKQNLLART----EDQLDTTTKRTMMENDQMISELQYQSKETEKLLVKYKALETEVVHLRLQLKVNKDTEVEMAKRTHFYQKLIKKLNERVQSD 298          
BLAST of mRNA_E_fasciculatus_S2_contig7907.16072.1 vs.
Match: Cilia- (and flagella-associated protein 157 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7V1_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.930e-8
Identity = 63/226 (27.88%), Postives = 116/226 (51.33%), Query Frame = 1
Query:    4 EDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKA--EKEYTSKIEELEIRRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQSTVENDLNAERRKKLQEKQRVRTQVEEEIMKLSSELFSKKASCQEVELADKTVRAKDNNEKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASEVVLHKRVRLYHDLVISLKARLEQE 675
            ED++D+Y+YLHKKLD NY+VIS L+ +  +E+  REK   E++Y S +     +  +E     E++ + E  L+ +    + K   +    +LES++   +      L    RK +QEK+R++ ++  +I +    L +      E +L   T R    N+++ + LQ ++K+ E+++   + +  E   LR  L L + +EV + KR   Y  L+  L  R + +
Sbjct:   65 EDEADIYFYLHKKLDGNYEVISQLENE--IESVKREKTTMEEQYNSDLAAKTEQFSKEKKDWSERMESAESTLHALELFQERKTALENTLDQLESQLTREKDQHRQQLMDIERKNIQEKERIKKEMLVKIKENKQNLLA----MTEDQLHTTTKRTMMENDQMISELQYQSKETEKLLAKYKAIEAEVTQLRLQLKLNKETEVEMAKRTHFYQKLIKKLNERAQSD 284          
BLAST of mRNA_E_fasciculatus_S2_contig7907.16072.1 vs.
Match: Cilia- (and flagella-associated protein 157 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2D7_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.430e-7
Identity = 61/224 (27.23%), Postives = 113/224 (50.45%), Query Frame = 1
Query:    4 EDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTSKIEELEIRRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQSTVENDLNAERRKKLQEKQRVRTQVEEEIMKLSSELFSKKASCQEVELADKTVRAKDNNEKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASEVVLHKRVRLYHDLVISLKARLEQE 675
            ED++D+YYYLHKKLD NY+VI+ L+  +     +R+  +  +  K  E E    +E   L E++   E+ L+ +    + K   + K A +ES +   +      L    R+ +QEK+R++  +  +I +    L ++     E +L   T R    N+++ + LQ ++K+ E+++   + L  E   LR  L + + +EV + KR   Y  L+  L  R++ +
Sbjct:   84 EDEADIYYYLHKKLDANYEVIAQLESDIQTVKQERDAMDVAFRLKQHETEEAFAKEKRELTERVEGAEDTLHALEVFRERKIALEDKIAAMESTLVAEKENHRKQLVDMERRNVQEKERIKKDMLMKIKENKQNLLART----EDQLDTTTKRTMMENDQMISELQYQSKETEKLLAKYKALETEVVHLRLQLKVNKETEVEMAKRTHFYQKLIKKLNERVQSD 303          
BLAST of mRNA_E_fasciculatus_S2_contig7907.16072.1 vs.
Match: Cilia- (and flagella-associated protein 157 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAS3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 6.640e-7
Identity = 62/229 (27.07%), Postives = 122/229 (53.28%), Query Frame = 1
Query:    4 EDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTSKIEELEIRRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQSTVENDLNAER-------RKKLQEKQRVRTQVEEEIMKLSSELFSKKASCQEVELADKTVRAKDNNEKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASEVVLHKRVRLYHDLVISLKARLE 669
            ED++D+Y+YLHKKLD NY+VI+ L+ ++    A++   E +Y +++      + E+    ++      E   G  +A +  QE   ++A LE  +E  Q+T+  +  A R       R+ +QEK+R++ ++   ++K+     +K+A C     AD+T+     N+++ + LQ ++K+ E+++   + +  E   LR  L L + +E+ + KR   Y  L+  L  R++
Sbjct:  430 EDEADIYFYLHKKLDANYEVITQLEGEIESVKAEKAVVEDQYHTEM----AVQSEQFSKERKDWAERMESAEGTLQALELFQE---RKAALEETLEKLQATLAQEKEAHRLQLIEIERRNVQEKERIKKEM---LIKIKE---NKQARCPWEAGADRTMM---ENDQMISELQYQSKETEKLLAKYKAIEAEVAQLRLQLKLNKETEIEMAKRTHFYQKLIKKLNERVQ 642          
BLAST of mRNA_E_fasciculatus_S2_contig7907.16072.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVY9_HETAK)

HSP 1 Score: 63.5 bits (153), Expect = 1.010e-6
Identity = 30/46 (65.22%), Postives = 39/46 (84.78%), Query Frame = 1
Query:    7 DQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTSKIE 144
            DQ+DVYYYLHKKLDDN+D+IS L+RQ++ E  DRE+ ++EY  KIE
Sbjct:   66 DQADVYYYLHKKLDDNFDLISELERQIISEQTDRERKKREYERKIE 111          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7907.16072.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
Cilia-0.000e+082.95and flagella-associated protein 157 n=1 Tax=Ectoca... [more]
Cilia-0.000e+080.35and flagella-associated protein 157 n=1 Tax=Ectoca... [more]
Cilia-2.610e-826.79and flagella-associated protein 157 n=1 Tax=Aphano... [more]
Cilia-3.470e-825.96and flagella-associated protein 157 n=1 Tax=Aphano... [more]
Cilia-3.490e-826.79and flagella-associated protein 157 n=2 Tax=Aphano... [more]
Cilia-5.930e-827.88and flagella-associated protein 157 n=1 Tax=Thraus... [more]
Cilia-1.430e-727.23and flagella-associated protein 157 n=2 Tax=Aphano... [more]
Cilia-6.640e-727.07and flagella-associated protein 157 n=1 Tax=Achlya... [more]
Hypothetical1.010e-665.22protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7907contigE_fasciculatus_S2_contig7907:2170..6271 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start0
Model size2064
Hectar predicted targeting categoryother localisation
Exons5
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-00_008720.1
Cds size2064
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842451.9140701-CDS-E_fasciculatus_S2_contig7907:2169..23401696842451.9140701-CDS-E_fasciculatus_S2_contig7907:2169..2340Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7907 2170..2340 -
1696842451.9269717-CDS-E_fasciculatus_S2_contig7907:3023..43131696842451.9269717-CDS-E_fasciculatus_S2_contig7907:3023..4313Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7907 3024..4313 -
1696842451.935971-CDS-E_fasciculatus_S2_contig7907:4875..50501696842451.935971-CDS-E_fasciculatus_S2_contig7907:4875..5050Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7907 4876..5050 -
1696842451.9445908-CDS-E_fasciculatus_S2_contig7907:5508..57231696842451.9445908-CDS-E_fasciculatus_S2_contig7907:5508..5723Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7907 5509..5723 -
1696842451.9532728-CDS-E_fasciculatus_S2_contig7907:6058..62711696842451.9532728-CDS-E_fasciculatus_S2_contig7907:6058..6271Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7907 6059..6271 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7907.16072.1prot_E_fasciculatus_S2_contig7907.16072.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7907 2170..6271 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7907.16072.1

>prot_E_fasciculatus_S2_contig7907.16072.1 ID=prot_E_fasciculatus_S2_contig7907.16072.1|Name=mRNA_E_fasciculatus_S2_contig7907.16072.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=688bp
QEDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTSKIEEL
EIRRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQ
STVENDLNAERRKKLQEKQRVRTQVEEEIMKLSSELFSKKASCQEVELAD
KTVRAKDNNEKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEAS
EVVLHKRVRLYHDLVISLKARLEQEACDDDAEDDDISDGQELADLEESLA
SSGGGGHRRAADDTTVSCLETLSSTSDTPPSAQVVWAGGACGALAYESVD
ELRVAVESLQRLHAELREEARGLTARIDEAVDTAPAAGTEGDGGRETEDP
VVSCLLEAAEEWTATALASRPARPGKEPGGICGGGKEEGPPMLLLPSSAS
GRALSVRGLPGDHSGATNNNSNNNNTGANGHRYNLRSGGGNRGKTAGSKS
GSGSRGKTTDSSRSGKRGSVATARGGSTLANQQRQQSPSPSPCAARTGGG
RDGGALATATKTPLRRRELFYHLVDAFREYQTRRTGQHVGDGAVGVDSDR
LPDGKERGRKGATETGTTTAEAGGLDGGGSSVSTEFPPVGVSFGDGGDLH
SASDGLSASVRTLCDFGPPDCHSVSTQTVAKHFPEKFASVRPARRLVVNS
TFLTSHSTVTNSVLSASTVRSWGYGAASFDSQTDRRV*
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mRNA from alignment at E_fasciculatus_S2_contig7907:2170..6271-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7907.16072.1 ID=mRNA_E_fasciculatus_S2_contig7907.16072.1|Name=mRNA_E_fasciculatus_S2_contig7907.16072.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4102bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7907:2170..6271- (Ectocarpus fasciculatus EfasUO2)
CAGGAAGATCAGAGTGACGTCTACTACTACCTCCACAAGAAGCTTGATGA CAACTACGACGTCATCAGCGCCCTGCAGAGGCAGCTCATGGTCGAAACAG CCGACCGAGAAAAGGCGGAGAAAGAGTACACCAGTAAGATCGAGGAGCTG GAGATTCGCAGAGACGAGGAGCTCGGGCCGCTGAAAGAAAAGCTCATGAC GGAGGAGGAGCAGGTGTTCTAGTAGTAAACGCTGACGGTATTCTTGGCCT CCTACACGCATGCCGTGGTTTGGGGAGAACTCTGTGCACGAACCTTCCCC GACGTGCTCTCGAGTTGGTTCACATCGACTTACGCTTGGAACGCAGATAA GGGAGAAGGTACCCGGGCGAGGCAGGTCAACGGAAATTTGAGTCAATTTT TCGGCACGCCCATACCAGCCAACAAGAGCAGGCACCAAACTCAGAACGTT GGAACTATTAGTACTACGTAGGTTGATTTCAACTCTACCAAGTTTTACCG AGGCCTGCTCTGTTGATTGATCGGCTGCTGCCCTTGCTTGCATCGCAGCT GAATGGCATGCACGAGGCCGCGAAGAACAAGCAAGAGGCGGACGCGAAGC GAGCGCGGCTCGAGAGCGAGATCGAGACGACACAGTCCACGGTCGAGAAC GACCTCAACGCCGAGCGACGCAAAAAACTGCAGGAGAAGCAGCGGGTGCG GACGCAGGTCGAGGAAGAGATCATGAAGCTCAGCTCCGAGCTTTTCTCCA AAAAGGCAAGCTGGTACCGACTACTCTTCTTCTGGTTTAGGTATGAGGCA CACCTCTAACCTCCATGCTGGACTGAATGAAGATCCCGCGTTTGCCGTAT AAACAATTTAACCAAACATGCGCCGAAAACCAGCGTGCTGCTGTGCTCTG GCCAGCGGGCTTCAACGTGACACAGCCGTCGCTTATCTTTTCCTCATCGT CGATGCCACCGCCGTCGTCGTCGCTGCTGAAAGCCGATACATTCTACTGT TCGAGCATTTTTTTAGCTCAAACTCACAGAATGACCCAGGGTTGATCGAC CAAGGCGGACCAAGTCCCGCCGGATAAACGTCCCTCAACCTGGCTGGCTT GACCAAAACCTACCCCAACGCTAGCCTAGCCTCAATCGATCCCAATCCCT ACTCTGTTCATCACCCGACTCAACCGCGTTTGACGACATCCGACCCCCGG CTCGATCAAATTTTGCCGGAGCCAGGAAGTTGAGCTCGCCGACAAGACGG TGCGTGCCAAGGACAACAACGAGAAGCTACACGCGGCGCTGCAGGCGAAG GCCAAGCAGGCCGAGCAGATGATGGTGATGAACCAGGGCCTGATCTTCGA GAACAGGAGCTTGAGAAACGACTTGGATCTTGCGGAAGCCTCGGAGGTAC AAGAAACGCTAACCTCAGTACTCTCAAGCCTGTGCGCCGTCGGTGTGCGT GTGGGCATAGGGTATGGTGTGCCGCTTCGCATTGTGATGGAAACCGCCGT AGATGCGTACACGGAAGTTACGAGTTTCTTCGAAGCACATGACATGGGCG TGAAGATCACTCTTTGATGTTAGGCTGCCTTGTGATACAGCCAGAAGCGG GAAAGGGTTTTTCGCCGTTGTAGCCCACTGACCTACCTTCTGCGGGTGGG GAATAGAGTTGGATCAAGCCAGCCCACCACTTGATTGCTATATTTAGCCG GTCTCGGGTAGTCGAAGCCCAATACGCATACTGCATGGAACAGTTGATGC GGGCAAGAAAGCTGCACCTGGCACACTCGCCCCGGCCTCTTCTTTTCCGC TCGGCACGCATAGCGATATCTTCCTCTTGCTTTAGGAAAAACCCACCTCC CTACTACTCACGATACATGGGGGGGCATCAAGTACACCAAGGCTTCCTAC GACCTTCTTCGTAAATAAATTTTGCGTACCACCACACGATATCCAATCCA AATCACAGGTAGTCCTACACAAGCGCGTCCGGCTGTACCACGACCTCGTG ATCAGCCTCAAGGCCCGGCTGGAGCAGGAGGCCTGCGACGATGACGCCGA GGACGACGACATCAGCGACGGACAGGAGCTGGCCGATCTTGAGGAGTCTC TAGCGAGTAGCGGCGGCGGCGGGCATCGAAGGGCAGCAGACGACACCACC GTGTCTTGCCTCGAGACTCTGTCTTCGACGTCGGACACGCCTCCCAGTGC CCAGGTCGTCTGGGCCGGCGGGGCCTGCGGGGCGCTCGCGTACGAGTCCG TGGACGAGCTCCGCGTCGCCGTCGAGAGCTTGCAGCGCTTGCACGCCGAG CTACGGGAGGAGGCAAGGGGACTGACCGCGCGGATCGACGAGGCTGTGGA TACCGCTCCTGCAGCAGGGACCGAGGGGGATGGTGGCCGTGAAACGGAGG ACCCCGTGGTGTCGTGCCTGCTAGAGGCGGCGGAGGAATGGACGGCGACA GCGTTGGCGTCACGACCGGCGAGGCCGGGCAAAGAGCCGGGCGGAATCTG CGGCGGCGGCAAAGAAGAAGGCCCGCCCATGCTGTTACTCCCTTCGTCGG CAAGTGGAAGAGCACTCTCTGTGCGGGGTTTGCCAGGTGACCACAGCGGC GCGACCAACAACAACAGCAACAACAACAACACCGGGGCCAACGGTCACCG CTACAATCTGCGGAGCGGCGGCGGAAATCGCGGGAAAACTGCGGGCAGCA AAAGCGGCAGCGGAAGTCGTGGGAAAACCACGGACAGCAGCAGGAGCGGC AAGCGAGGGTCGGTGGCGACAGCACGTGGTGGGTCGACGCTCGCAAATCA GCAAAGACAACAATCTCCGTCGCCGTCGCCGTGCGCGGCGCGAACCGGCG GCGGCCGCGACGGCGGAGCTCTGGCGACGGCTACCAAAACCCCGCTCCGC CGCCGGGAGCTGTTCTACCACCTCGTGGACGCGTTTCGAGAGTACCAGAC GAGAAGAACAGGCCAGCACGTCGGCGATGGTGCTGTTGGCGTAGACAGCG ACCGGCTTCCCGACGGGAAAGAGCGGGGGCGGAAAGGCGCTACGGAGACA GGGACTACGACGGCAGAAGCGGGAGGACTCGACGGGGGCGGCAGCAGCGT CAGCACCGAGTTTCCCCCCGTTGGTGTTTCGTTCGGTGATGGCGGCGACC TGCACTCGGCGAGCGATGGCCTGTCCGCGTCTGTTCGGACTCTGTGTGAC TTCGGGCCGCCGGATTGCCATAGCGTGTCAACGCAAACCGTCGCCAAGGT GGGGGGGGGGGCACAAACAAATGTCCGATTGGTCGGTCTTGAGGTTCCCT GCTCGCGTAGGTTGTGCTGCGGTTTGTTGTTGCGTTCAAGAAATCCAGCG TGTTTCTGCAGCAAGCGTACTATGCTTGAATGACCCGTTCCACTTTGTCT GCAGTATTGATGTCATTGCACTATCAGCGACCCTCGCATTTCGCTGAAGA TGGTGACTCTATGCCCAGCGTCTTTACCTTCCCGAGTCTTGTGATCCGGG GGGGGGGTCCAGTAAAATGCTATTCTCAACCCAGACACAACCGCAACAGA TGCTTGCTCCCTCCTCCGTAGTCCAGTTTCGTCGTTTGTGAGAACCCGAC GTGCCTTTCACCCAGGCTCACGTCATGGCGGGTCTAGAGGAACTGGCTGT GACGTGATCGTGGAGGAGAGCAGCATGATTTACACACCCTCGCCCCCGCC CTACAGTCCAATCGCCCACCCTCCCCCCACCCCACCCCACCCCCCCCCCC CCCAGCGCCAAACCCCCCACCCCCCCCAACGCCNNNNNNNNNNTTTTGGG GGGGGGGAGCACCATTATTTACCCCCCCCCCCCCCCCCCCTACAGTCCCT TCCCCCCCCCCCCCCCGCCCCCCGCTCATCGTTCGACACACCCCTAATCA CTCGCGTTACCCTGTTTCTTCCTCTTTGCAGCACTTCCCGGAGAAGTTCG CGTCGGTTCGGCCCGCCCGAAGGCTCGTGGTCAACAGCACCTTCCTCACC TCTCACAGCACCGTCACCAACAGCGTGCTCTCCGCCAGCACCGTGCGGAG CTGGGGCTACGGCGCGGCCTCCTTCGACAGCCAAACCGACCGGCGGGTTT AA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7907:2170..6271-

>mRNA_E_fasciculatus_S2_contig7907.16072.1 ID=mRNA_E_fasciculatus_S2_contig7907.16072.1|Name=mRNA_E_fasciculatus_S2_contig7907.16072.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2064bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7907:2170..6271- (Ectocarpus fasciculatus EfasUO2)
CAGGAAGATCAGAGTGACGTCTACTACTACCTCCACAAGAAGCTTGATGA
CAACTACGACGTCATCAGCGCCCTGCAGAGGCAGCTCATGGTCGAAACAG
CCGACCGAGAAAAGGCGGAGAAAGAGTACACCAGTAAGATCGAGGAGCTG
GAGATTCGCAGAGACGAGGAGCTCGGGCCGCTGAAAGAAAAGCTCATGAC
GGAGGAGGAGCAGCTGAATGGCATGCACGAGGCCGCGAAGAACAAGCAAG
AGGCGGACGCGAAGCGAGCGCGGCTCGAGAGCGAGATCGAGACGACACAG
TCCACGGTCGAGAACGACCTCAACGCCGAGCGACGCAAAAAACTGCAGGA
GAAGCAGCGGGTGCGGACGCAGGTCGAGGAAGAGATCATGAAGCTCAGCT
CCGAGCTTTTCTCCAAAAAGGCAAGCTGCCAGGAAGTTGAGCTCGCCGAC
AAGACGGTGCGTGCCAAGGACAACAACGAGAAGCTACACGCGGCGCTGCA
GGCGAAGGCCAAGCAGGCCGAGCAGATGATGGTGATGAACCAGGGCCTGA
TCTTCGAGAACAGGAGCTTGAGAAACGACTTGGATCTTGCGGAAGCCTCG
GAGGTAGTCCTACACAAGCGCGTCCGGCTGTACCACGACCTCGTGATCAG
CCTCAAGGCCCGGCTGGAGCAGGAGGCCTGCGACGATGACGCCGAGGACG
ACGACATCAGCGACGGACAGGAGCTGGCCGATCTTGAGGAGTCTCTAGCG
AGTAGCGGCGGCGGCGGGCATCGAAGGGCAGCAGACGACACCACCGTGTC
TTGCCTCGAGACTCTGTCTTCGACGTCGGACACGCCTCCCAGTGCCCAGG
TCGTCTGGGCCGGCGGGGCCTGCGGGGCGCTCGCGTACGAGTCCGTGGAC
GAGCTCCGCGTCGCCGTCGAGAGCTTGCAGCGCTTGCACGCCGAGCTACG
GGAGGAGGCAAGGGGACTGACCGCGCGGATCGACGAGGCTGTGGATACCG
CTCCTGCAGCAGGGACCGAGGGGGATGGTGGCCGTGAAACGGAGGACCCC
GTGGTGTCGTGCCTGCTAGAGGCGGCGGAGGAATGGACGGCGACAGCGTT
GGCGTCACGACCGGCGAGGCCGGGCAAAGAGCCGGGCGGAATCTGCGGCG
GCGGCAAAGAAGAAGGCCCGCCCATGCTGTTACTCCCTTCGTCGGCAAGT
GGAAGAGCACTCTCTGTGCGGGGTTTGCCAGGTGACCACAGCGGCGCGAC
CAACAACAACAGCAACAACAACAACACCGGGGCCAACGGTCACCGCTACA
ATCTGCGGAGCGGCGGCGGAAATCGCGGGAAAACTGCGGGCAGCAAAAGC
GGCAGCGGAAGTCGTGGGAAAACCACGGACAGCAGCAGGAGCGGCAAGCG
AGGGTCGGTGGCGACAGCACGTGGTGGGTCGACGCTCGCAAATCAGCAAA
GACAACAATCTCCGTCGCCGTCGCCGTGCGCGGCGCGAACCGGCGGCGGC
CGCGACGGCGGAGCTCTGGCGACGGCTACCAAAACCCCGCTCCGCCGCCG
GGAGCTGTTCTACCACCTCGTGGACGCGTTTCGAGAGTACCAGACGAGAA
GAACAGGCCAGCACGTCGGCGATGGTGCTGTTGGCGTAGACAGCGACCGG
CTTCCCGACGGGAAAGAGCGGGGGCGGAAAGGCGCTACGGAGACAGGGAC
TACGACGGCAGAAGCGGGAGGACTCGACGGGGGCGGCAGCAGCGTCAGCA
CCGAGTTTCCCCCCGTTGGTGTTTCGTTCGGTGATGGCGGCGACCTGCAC
TCGGCGAGCGATGGCCTGTCCGCGTCTGTTCGGACTCTGTGTGACTTCGG
GCCGCCGGATTGCCATAGCGTGTCAACGCAAACCGTCGCCAAGCACTTCC
CGGAGAAGTTCGCGTCGGTTCGGCCCGCCCGAAGGCTCGTGGTCAACAGC
ACCTTCCTCACCTCTCACAGCACCGTCACCAACAGCGTGCTCTCCGCCAG
CACCGTGCGGAGCTGGGGCTACGGCGCGGCCTCCTTCGACAGCCAAACCG
ACCGGCGGGTTTAA
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