mRNA_E_fasciculatus_S2_contig790.16065.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Match: Chain (A, Crystal Structure Of A Designed Full Consensus Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC8_ECTSI) HSP 1 Score: 160 bits (404), Expect = 3.120e-44 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1
Query: 136 ASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRAATWKRLGPLDQ 372
ASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRAATWKRLGPLDQ
Sbjct: 50 ASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRAATWKRLGPLDQ 128
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Match: ankyrin (repeat-containing protein C6C3.08-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1D22E) HSP 1 Score: 72.4 bits (176), Expect = 6.510e-11 Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = 1
Query: 13 SSTHPIHRAGRSGDLCVVRRFLRKPA----ILNRRDIDEMTCLHWASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACA-RGHRSVVGALLTAGASVDIESHDGRTALHRAATWKRL 357
S IH A R G VV L ++ R D D +HWAS ++ +++ L +++AQDG GWT LM A + + ++V LL GASVD+++++G+TALH A++ L
Sbjct: 8 SQKFAIHAACREGQTKVVESLLNAEGSGRRLITREDEDGRQPIHWASSYNRLQIVEYLAEQKGFDIDAQDGAGWTALMMAASLKEGDALVDFLLLTGASVDVKTNNGQTALHYASSKSNL 127
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Match: putative (ankyrin repeat protein RF_0381 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE55FC7) HSP 1 Score: 70.5 bits (171), Expect = 1.550e-9 Identity = 34/93 (36.56%), Postives = 52/93 (55.91%), Query Frame = 1
Query: 25 PIHRAGRSGDLCVVRRFLRKPAILNRRDIDEMTCLHWASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDI 303
P+ A + G V + K A L+ D D+ T LH A + G +++I+ L+ D + +N QDG GWTP+MHA GH+ V L+ GA + +
Sbjct: 142 PVMHAAKGGHEAVFDVLVDKGADLSPVDGDKETILHVACEGGNVEIIKYLLKHDIVNINCQDGKGWTPIMHAAMSGHKGVFDVLVEGGADLSL 234
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Match: Similar (to S.cerevisiae protein NAS6 (Assembly chaperone for the 19S proteasome regulatory particle base) n=2 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=A0A1M8A2X3_MALS4) HSP 1 Score: 65.9 bits (159), Expect = 1.190e-8 Identity = 39/104 (37.50%), Postives = 54/104 (51.92%), Query Frame = 1
Query: 13 SSTHPIHRAGRSGDLCVVRRFLRKP---AILNRRDIDEMTCLHWASQLGQI-DVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESH 312
S HP+H+A G L V+ L A L R D D LHWA + +++ L+ A +++NA D +GWTPLM A + G R +V LL GA V +H
Sbjct: 2 SQDHPLHQACLDGHLSRVQELLHTDEGRASLTRADADGRQPLHWAVTSDEKREIVDALLGAGDVDVNAPDASGWTPLMIASSSGARRIVQTLLQRGADVHAGNH 105
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Rachicladosporium sp. CCFEE 5018 TaxID=1974281 RepID=A0A1V8UHE5_9PEZI) HSP 1 Score: 61.6 bits (148), Expect = 2.340e-8 Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 16 STHPIHRAGRSGDLCVVRRFL-RKPAILNRRDIDEMTCLHWASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHR-SVVGALLTAGA 291
S + IH A R G VV L P +++ RD D+ LHWA+ ++D+ Q L ++++AQDG GWT LM A + H ++V LL+ GA
Sbjct: 8 SKYAIHAACREGQTNVVESLLYADPKLISLRDDDDRLPLHWATSYSRLDIAQLLCERKGVDIDAQDGAGWTALMMAASIKHGDTLVDFLLSKGA 101
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Match: BZIP (domain-containing protein n=1 Tax=Penicillium vulpinum TaxID=29845 RepID=A0A1V6RZL9_9EURO) HSP 1 Score: 63.5 bits (153), Expect = 1.570e-7 Identity = 39/120 (32.50%), Postives = 61/120 (50.83%), Query Frame = 1
Query: 7 QGSSTHPIHRAGRSGDLCVVRRFLRKPAILNRRDIDEMTCLHWASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRAATWKRLGPL 366
+ S + P HR D+ + P N D + LH A+Q G +++ L+ I++N QD +G TPL++A H VV LL+ GA + + +GR+ LH A ++RLG L
Sbjct: 158 ENSYSPPFHRRTSDSDIRPESLHFQLPQSHND---DTIGALHIAAQKGHERIVRVLLIRGNIDVNNQDSDGRTPLIYAIIENHDPVVRLLLSHGARIAVYDREGRSGLHWAVLYRRLGIL 274
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Match: Ankyrin (n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167MBC5_CALVF) HSP 1 Score: 59.7 bits (143), Expect = 3.910e-7 Identity = 35/92 (38.04%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 28 IHRAGRSGDLCVVRRFLRK-PAILNRRDIDEMTCLHWASQLGQIDVIQELIAADAI-ELNAQDGNGWTPLMHACARGHRSVVGALLTAGASV 297
IH+A G +V L P++L+ +D+D T LHWAS + DV++ L++ + ++N +D GWTPLM A + G +V L+ AGA V
Sbjct: 6 IHKAALEGQRSLVASLLSSNPSLLDNKDVDGRTPLHWASTRHK-DVVELLLSHNPPPDVNIKDSQGWTPLMIAASAGQDDIVELLIGAGADV 96
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Match: Ankyrin (repeats n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8SHJ0_9AGAM) HSP 1 Score: 58.5 bits (140), Expect = 2.840e-6 Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 1
Query: 28 IHRAGRSGDLCVVRRFLR-KPAILNRRDIDEMTCLHWASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRAAT 345
IH A +VR L +P +L+ +D DE T LHWA+ G I+++Q+LI+ A ++ +D + + GH +VV LL AGAS + G T LH AA+
Sbjct: 5 IHNAALQNQPSLVRSLLTAEPKLLDAKDADERTPLHWAASSGAIEIVQDLISRKAT-IDPKDNS--------VSAGHDNVVQELLGAGASPLATNDKGLTPLHYAAS 102
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Match: uncharacterized (protein LOC124148037 isoform X5 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAF922B) HSP 1 Score: 59.7 bits (143), Expect = 6.720e-6 Identity = 39/105 (37.14%), Postives = 53/105 (50.48%), Query Frame = 1
Query: 25 PIHRAGRSGDLCVVRRFLRKPAILNRRDIDEMTCLHWASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRA 339
PI A G V K A L+ D D + LH A Q G + ++Q LI+ I N + NGWTP+M A +GH+SV L + GA + + DG + LH A
Sbjct: 1887 PIMVAAVKGHKSVFDFLESKGADLSLVDTDGDSLLHLAFQEGNMTIVQHLISDSNI--NQRGKNGWTPIMDAAVKGHKSVFDFLESKGADLSLVDTDGDSLLHLA 1989
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Match: uncharacterized (protein LOC124126345 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB081F0) HSP 1 Score: 59.3 bits (142), Expect = 7.440e-6 Identity = 36/113 (31.86%), Postives = 59/113 (52.21%), Query Frame = 1
Query: 1 MGQGSSTHPIHRAGRSGDLCVVRRFLRKPAILNRRDIDEMTCLHWASQLGQIDVIQELIAADAIELNAQDGNGWTPLMHACARGHRSVVGALLTAGASVDIESHDGRTALHRA 339
+G GS T P+ A G VV +R+ A + D + LH A G + +++ ++ + +++N++ TP+M A RGHR VVG L++ GA V + +G LH A
Sbjct: 571 VGFGSRT-PVMMAAERGHREVVELLVREGADASLLDENGYNILHLAYTGGDVKIVKFALSLNVVDINSRGWRSRTPVMMAAERGHREVVGLLVSKGADVPLLDENGYNILHLA 682 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig790.16065.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig790.16065.1 >prot_E_fasciculatus_S2_contig790.16065.1 ID=prot_E_fasciculatus_S2_contig790.16065.1|Name=mRNA_E_fasciculatus_S2_contig790.16065.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=380bp MGQGSSTHPIHRAGRSGDLCVVRRFLRKPAILNRRDIDEMTCLHWASQLGback to top mRNA from alignment at E_fasciculatus_S2_contig790:6918..10994- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig790.16065.1 ID=mRNA_E_fasciculatus_S2_contig790.16065.1|Name=mRNA_E_fasciculatus_S2_contig790.16065.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4077bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig790:6918..10994- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig790:6918..10994- >mRNA_E_fasciculatus_S2_contig790.16065.1 ID=mRNA_E_fasciculatus_S2_contig790.16065.1|Name=mRNA_E_fasciculatus_S2_contig790.16065.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1140bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig790:6918..10994- (Ectocarpus fasciculatus EfasUO2)back to top |