mRNA_E_fasciculatus_S2_contig79.16057.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig79.16057.1
Unique NamemRNA_E_fasciculatus_S2_contig79.16057.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF9_ECTSI)

HSP 1 Score: 1078 bits (2789), Expect = 0.000e+0
Identity = 590/629 (93.80%), Postives = 600/629 (95.39%), Query Frame = 1 
Query:    1 GRTGSSSLDVEGGGAAESASGIEEELEARRRRSKNRSPSSGGDELKPGPRPGATSALDVDTPLAGGAAGLIEAAPDMAKEALSSLASVGNSAFHTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQARHINDLRQNVAACLVAAGAIFWSIPVLLIQFWASYSQLEKIFPVLADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDPTSVLNILGETFPAVAVYFLDVIIVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIRTGPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGAIFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGITQASLILPLPALIYWYGYRSFKRYLGPAESISMETAARIDRRGASAMAAAVKAAAEGRRGRHWQDSGRXXXXXXXXXXXXXGGVNPDEFEPLLYAQLALTSPSVEPSDCRAPDPETRRSRVGSGTLSSLDGAGDPSSGLPSPAALASLQAPLLGSRAAAARVAANDDRSSSADYVEV 1887
            GRTGSSSLDVEGGGAAESASGIEEELEARRRRSKNRSPSSGGDELKPGPRPG TSALD D PLAGGAAGLIEAAPDMAKEALSSLASVGNSAF+TTRRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQ    NDLRQNVAA LVAAGAIFWS PVLLIQ WASYS+LEKIFPVLADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDP SVLNILGETFPAVAVYFLDVI+VK+FVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIRTGPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGA+FFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAG TQASLILPLP  IYWYGYRSFKRYLGPAESISMETAARIDRRGASAMAAAVKAAAEGRR RHW+DSGR     XXXXXXX  GVNPDEFEPLLYAQLALTSPSVEPSDC  PDPE RR+R GSG  SSL+GAG+ SSGLPSPAALASLQAPLLGSRAAAARVAA+DDRSSSADYVEV
Sbjct:  422 GRTGSSSLDVEGGGAAESASGIEEELEARRRRSKNRSPSSGGDELKPGPRPGVTSALDTDQPLAGGAAGLIEAAPDMAKEALSSLASVGNSAFNTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQ----NDLRQNVAAWLVAAGAIFWSFPVLLIQLWASYSELEKIFPVLADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDPASVLNILGETFPAVAVYFLDVIVVKIFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIRTGPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGALFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGFTQASLILPLPVFIYWYGYRSFKRYLGPAESISMETAARIDRRGASAMAAAVKAAAEGRRRRHWEDSGRQDGDDXXXXXXX--GVNPDEFEPLLYAQLALTSPSVEPSDCSPPDPEARRTRAGSGAPSSLEGAGEASSGLPSPAALASLQAPLLGSRAAAARVAASDDRSSSADYVEV 1044
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA7_9STRA)

HSP 1 Score: 362 bits (929), Expect = 3.020e-105
Identity = 203/427 (47.54%), Postives = 266/427 (62.30%), Query Frame = 1 
Query:  301 RGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQARHINDLRQNVAACLVAAGAIFWSIPVLLIQFWASYSQLEKIFPVLADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTV-------------ASGSIISALQEILDDPTSVLNILGETFPAVAVYFLDVIIVKLFVGLPFELLRGWPLIRVLWSQRC-------------------TNRDFATEREIRT-GPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGAIFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGITQASLILPLPALIYWYGYRSFKRYLGPAESISMETAARIDRR 1482
            R +  L + +R+S+TGFVTF  +AA AA+ Q+L+  RP  C   PAP+PRDVVWKN AVP  Q      LR  +A  L+A GAI WS+P+  +Q W S  QL K  P L  L+ D +LY +++GYLPV++LL    LLP +F  +A  YE RK+ S+VQ S+++R+F YQ+ANIY+TV             ASG+I+ A Q I+D+P  V  ILG T P+VAVYF+++++VK   GLP EL R WPLI V WSQRC                     R     R   T G F P ++ YGWVYPTLLLVLVVC VYAVI+P +MP GA FFA+AY V+K+Q LYVYVP YESGG FWF V+   L+GL  AQ+TL GY  +R+G  Q   ++ LP +   Y   S  RY  P++ +S+E A ++D R
Sbjct:  577 RSIAGLAIPERVSSTGFVTFNTLAAKAAASQLLVTHRPRTCRTYPAPEPRDVVWKNAAVPAGQVA----LRGIIANVLLAFGAILWSVPITALQAWTSMDQLSKWIPALDSLNHDGYLYTLVSGYLPVLVLLILIMLLPVIFTMIAQGYELRKTISDVQASVMSRFFYYQLANIYITVSAAXXXXXXLSLVASGTILEAFQSIVDNPKEVATILGTTLPSVAVYFVNLVLVKTLSGLPMELSRLWPLITVTWSQRCGGGRLCAWLCCCCRCWRGRPRRQXRRTRGAYTRGAFTPPQMAYGWVYPTLLLVLVVCLVYAVITPVMMPVGAAFFAVAYAVHKFQVLYVYVPAYESGGSFWFDVHDWTLVGLVTAQITLLGYTTLRSGFKQTPFLVVLPIVTLCYRSISQDRYRAPSQRLSLERARQLDER 999
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Match: ERD (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDX2_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 3.840e-101
Identity = 175/204 (85.78%), Postives = 178/204 (87.25%), Query Frame = 1 
Query: 1105 VYPTLLLVLVVCFVYAVISPFIMPAGAIFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGITQASLILPLPALIYWYGYRSFKRYLGPAESISMETAARIDRRGASAMAAAVKAAAEGRRGRHWQDSGRXXXXXXXXXXXXXGGVNPDEFEPLLYAQLALTSPSVEPSDCRAPDPETRRSR 1716
            VYPTLLLVLVVCFVYAVISPFIMPAGA+FFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAG TQASLILPLP  IYWYGYRSFKRYLGPAESISMETAARIDRRGASAMAAAVKAAAEGRR +HWQDSGR              GVNPDEFEPLLYAQLALTSPSVEPSDC   +     SR
Sbjct:    2 VYPTLLLVLVVCFVYAVISPFIMPAGALFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGFTQASLILPLPVFIYWYGYRSFKRYLGPAESISMETAARIDRRGASAMAAAVKAAAEGRRKKHWQDSGRQDRAGDDEKDDEEDGVNPDEFEPLLYAQLALTSPSVEPSDCSPRESAVEASR 205
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Match: ERD (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF22_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 1.020e-85
Identity = 157/165 (95.15%), Postives = 160/165 (96.97%), Query Frame = 1 
Query:    1 GRTGSSSLDVEGGGAAESASGIEEELEARRRRSKNRSPSSGGDELKPGPRPGATSALDVDTPLAGGAAGLIEAAPDMAKEALSSLASVGNSAFHTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQAR 495
            GRTGSSSLDVEGGG AES SGIEEELEARRRRS N+SPSSGGDELKPGPRPGATSALD D PLAGGAAGLIEAAP+MAKEALSSLASVGNSAFHTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACA+SRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQAR
Sbjct:  421 GRTGSSSLDVEGGGGAESLSGIEEELEARRRRSMNQSPSSGGDELKPGPRPGATSALDTDQPLAGGAAGLIEAAPEMAKEALSSLASVGNSAFHTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACASSRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQAR 585
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MIQ7_9STRA)

HSP 1 Score: 282 bits (721), Expect = 2.050e-76
Identity = 165/425 (38.82%), Postives = 251/425 (59.06%), Query Frame = 1 
Query:  247 SSLASVGNSAFHTTRRVARGVL-----------YLTLGQ--RMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQARHINDLRQNVAACLVAAGAIFWSIPVLLIQFWASYSQLEKIFPVLADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDPTSVLNILGETFPAVAVYFLDVIIVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIRTGPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGAIFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGITQAS--LILPLPALIYWYGYRSFKRYLGPAESISMETAARID 1476
            S L  +G     T    A+G L            LT G   R+STT FVTF+   A A+  Q+LL+      + + AP+P  +VW+N+++P  Q     ++R+++A   +  GA+FWSI V  I   ++   + ++ P L     ++ LY +   YL ++LL XXX LLPF+F  +A  YE  K+  ++Q SI+TRYF YQ+ANIYV+V  GS+ S+L E+L +P ++L ILG   P  + YF  ++IVK    +P E+LR +PL+ +L    C ++   T RE+RTG F    ++YGW YP++++VL++   YA I+P I+P  A +FA+AYL+YKYQ LYVY+  Y++GG  W++V+ R ++ L     TL  Y+ +R   T A   L+LPLP LI  + +   KR  GPA ++SME A  +D
Sbjct:  503 SGLEGIGKEGVKTAEFAAKGALRGVLEATRALELLTFGAQYRVSTTAFVTFKTRKAAASCHQMLLSHEYYTMEVKSAPNPSSLVWENVSIPLSQI----NIRRSIADGTLIVGALFWSIVVTAISAVSNMQSISRVIPSLQQYS-ETQLYQIANNYLALLLLXXXXALLPFVFDFIARYYEGLKTEIDIQNSIMTRYFYYQLANIYVSVGLGSVASSLHEVLANPANLLTILGAAVPTFSTYFACLVIVKTMTAVPIEMLRIFPLLDILSVSLCMDKRRCTRRELRTGAFADPPMVYGWCYPSIMMVLMIMMTYATIAPLILPLCAFYFAMAYLMYKYQLLYVYINSYQAGGEMWYAVFSRSMVVLLAGVCTLLCYLAIRMTFTTAPFYLLLPLPVLILLFWHHCEKRIRGPAMTLSMEGAMELD 922
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1D9_THAPS)

HSP 1 Score: 280 bits (716), Expect = 1.050e-75
Identity = 158/383 (41.25%), Postives = 233/383 (60.84%), Query Frame = 1 
Query:  334 MSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQARHINDLRQNVAACLVAAGAIFWSIPVLLIQFWASYSQLEKI--FPVLADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDPTSVLNILGETFPAVAVYFLDVIIVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIRTGPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGAIFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGITQASLILPLPALIYWYGYRSFKRYLGPAESISMETAARID 1476
            +S+TGFVTF+ +     S    L  + +  D   AP+ RD+VW+NI +     R I   ++ +A  L+  G + WSIP+ LIQ WA    + KI  F  +A++   ++   +I GYLPV+ LL    LLP +FQ +A  YERRK+ S V+ SI  RYF YQ+ANIY+TV +G++ ++L EI+D P  +L ILG+T P +A YF+ ++I K   GLP  LLR   L R+++ + C N+   T+RE+    +    ++YGW YPT  LV+ +CF YA+I+P I+P GAI+F  A LVYK QALYVY P Y+SGG+ +     + L  L ++QLT  GY  +R G+ Q   + PLP L  ++ +    RY+ P+  +S+E A +ID
Sbjct:  751 ISSTGFVTFKTITPVTVSTSAPLTYKGNPIDVFIAPEKRDIVWQNIQID----RDIGAGKEFIANVLLGLGVLLWSIPLTLIQAWAKVENVAKIPGFDWVANIHGGAW-KSLINGYLPVIALLGLILLLPLIFQLIATGYERRKTFSGVEDSIAGRYFYYQLANIYITVTAGALWTSLAEIIDHPQQLLLILGQTLPRLAGYFISLLITKTLAGLPMVLLRMGALSRMMFLRSCFNKKRLTQRELNA-VYRKQNIMYGWEYPTQFLVITICFTYAIITPVILPVGAIYFFFALLVYKKQALYVYTPTYDSGGLLFPQSVSKTLFALLISQLTFIGYTLIRKGVYQILFLSPLPFLTVFFSHYINSRYVKPSNKLSLERAVKID 1127
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SU52_THAOC)

HSP 1 Score: 273 bits (697), Expect = 6.210e-74
Identity = 169/391 (43.22%), Postives = 238/391 (60.87%), Query Frame = 1 
Query:  322 LGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQARHINDLRQNVAACLVAAGAIFWSIPVLLIQFWASYSQLEKIFPV--LADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDPTSVLNILGETFPAVAVYFLDVIIVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIRT--GPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGAIFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGITQASLILPLPAL-IYWYGYRSFKR-YLGPAESISMETAARID 1476
            +G  MS+TGF++F+ ++  A + +  L  +PD      AP+PRD++W+N  V Q  +R     R+  A  L+A GAI WSIPV  IQ  A+   L  +  +  +  L       +V  GYLPVVLLL    +LP +F A+A  YE RK+ S+VQ+S++ RYF YQ+ANI++TV +GSI+ +L EI++ PT++L ILG+T P V  YF+  ++ K+  GLP  LLR  PL+R ++ +      + T+ E+     P    +L YGW YP LLLV+ +CFVY+ ISP I+P G+ FF LA+L+YK Q L V+ P YESGG+ +     R LIGL   QLTLAGY  +R G  QA +I PLP + I   G   FK  Y+ P E IS+E A  +D
Sbjct:  526 VGVTMSSTGFISFKDLSTLACAVKTPLFHKPDVLVVRMAPEPRDLIWENAHVNQAWSRG----REFTANTLLAVGAILWSIPVASIQALATVDTLASVTGMDWIQTLHGGRVASFV-NGYLPVVLLLVIIMVLPHIFYAVALYYEDRKTQSDVQRSVIGRYFYYQLANIFITVTAGSILESLNEIVEHPTNILAILGKTLPNVVGYFVAFVMTKMLCGLPIVLLRLPPLMRTVFKKVVFREKYLTQSELDELQYPIKFRQLWYGWEYPNLLLVITICFVYSCISPVILPVGSAFFGLAWLIYKNQILTVFDPGYESGGLMFPMACHRTLIGLICGQLTLAGYSIIRGGFYQALVIFPLPIITIKMLGV--FKTLYIDPGECISVERAVELD 909
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4F1_THAPS)

HSP 1 Score: 267 bits (683), Expect = 3.170e-73
Identity = 169/392 (43.11%), Postives = 233/392 (59.44%), Query Frame = 1 
Query:  322 LGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQARHINDLRQNVAACLVAAGAIFWSIPVLLIQFWASYSQLEKI--FPVLADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDPTSVLNILGETFPAVAVYFLDVIIVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIRT--GPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGAIFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGITQASLILPLPALIYWYGYRSFKR-YLGPAESISMETAARIDRR 1482
            +G  MS+TGF+TFR +     + +  L  +PD      AP+PRD++W+N  V    ++     R+  A  L+  GAI WSIPV +IQ  A+  Q+  +     ++ L+  +   +V  GYLPVVLLL    +LPFLF  +A  YE RK+ S+VQ+SI+ RYF YQ+ANIY+TV +GSI+ +L EI + P++V  ILG++ P V  YF   I+ K+F GLP  LLR  PL R+++ +      + T+ E+     P   ++L YGW YP LLLV+V+CF Y+ ISP I+P GA +F  A++VYK Q L VY P YESGG  +     R LIGL   QLTL GY  +R G  QA L+ PLP LI       FK  Y+ P   IS+E A  +D R
Sbjct:  377 VGATMSSTGFITFRDLQTVTCAVKTPLFDKPDVLVVSMAPEPRDIIWENCHVNLGWSKG----REWTANMLLGLGAILWSIPVAIIQALATADQIATVPGMAWISTLNGGAVAGFV-NGYLPVVLLLTIIMVLPFLFYVVALHYEDRKTQSDVQKSIIGRYFYYQLANIYITVTAGSILESLGEIAEHPSNVFAILGKSLPNVVGYFATFIMTKVFAGLPLILLRVGPLFRMIFIKLLFREKYLTQSEMDEVYHPEKFSQLWYGWEYPNLLLVIVICFTYSCISPIILPVGAAYFLGAWIVYKNQILTVYRPSYESGGTMFPMACHRTLIGLVCGQLTLIGYCVMREGFYQALLMFPLP-LISIKMMDVFKNLYVVPGTCISVERAVELDAR 762
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZ12_TRICV)

HSP 1 Score: 254 bits (648), Expect = 1.250e-69
Identity = 154/383 (40.21%), Postives = 219/383 (57.18%), Query Frame = 1 
Query:  334 MSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQARHINDLRQNVAACLVAAGAIFWSIPVLLIQFWASYSQLEKI--FPVLADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDPTSVLNILGETFPAVAVYFLDVIIVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIRTGPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGAIFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGITQASLILPLPALIYWYGYRSFKRYLGPAESISMETAARID 1476
            MS+TGFVTF    +   +  + L  +PD    + AP+PRD+ W+N  +     R     R+ V+  L+  GA+ WSIP+  IQ +A   QL  I  F  +   D  + L  +I GYLPVV LL    LLP +F+ +A +YE RK+ SEVQ S++ RYF YQV NIY+TV +GS+  AL ++LD P  +L I GE+ P +  YF+  +I K+  GLP  +LR   L R+L+ +   +    T+R++    +    + YGW YPT LLV+++CF YA ISP I+P GA++F  A +VYK Q LYVY P YE GG  + +   R L+GL   QLT  GY  +R G  Q   + PLP +  +      K Y  P+  +S+E A  +D
Sbjct:  173 MSSTGFVTFLDHTSVTNASSLPLTHKPDALKADIAPEPRDIFWQNAHISVDVIRR----REMVSNFLLTLGALLWSIPLAAIQAFAKAEQLALIPGFEWILTFDGGN-LKALINGYLPVVALLCLILLLPVVFEWVALKYEHRKTRSEVQDSMVGRYFYYQVVNIYITVTAGSVWKALADVLDHPAQLLEIFGESIPLMVGYFISFLITKILAGLPTVILRVGALSRMLFLRTVFSEAKLTQRDLDE-VYRKENIQYGWEYPTQLLVIMICFAYACISPIILPLGAVYFFGALMVYKKQVLYVYEPIYEGGGRLFPTACDRTLMGLFFGQLTFIGYSTIRQGHYQPLFLFPLPFITMYMMSYFKKSYADPSTKLSLERAVDLD 549
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Match: Hypothetical (protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VC65_9STRA)

HSP 1 Score: 255 bits (651), Expect = 4.010e-69
Identity = 149/387 (38.50%), Postives = 217/387 (56.07%), Query Frame = 1 
Query:  322 LGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQARHINDLRQNVAACLVAAGAIFWSIPVLLIQFWASYSQLEKI--FPVLADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDPTSVLNILGETFPAVAVYFLDVIIVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIRTGPFGPAELLYGWVYPTLLLVLVVCFVYAVISPFIMPAGAIFFALAYLVYKYQALYVYVPKYESGGVFWFSVYPRVLIGLALAQLTLAGYVYVRAGITQASLILPLPALIYWYGYRSFKRYLGPAESISMETAARID 1476
            +G  MS+T FVTF    +   + + +L  +P+      AP+PRD++WKN  +    ++ I   ++     L   G + WSIP+  IQ +    QL  I     +   D  +   + I GYLPVV LL    +LP +F+ +A + E RK+ SEV  S++ RYF YQV NIYVTV +GSI  +L ++L+ P  VL ILGE+ P +  YF+  ++ K+  GLP  +LR  PL R+++ + C      T+RE+    +    + YGW YPT LLV+++ F YA ISP I+P GA++F  A +VYK Q LYVY+PKYESGG  +     R L GL   QLT  GY  +R G  Q   + PLP +  +  Y     Y  P++ +S+E A  +D
Sbjct:  282 VGTTMSSTSFVTFLDHTSMTNASRAILTQKPNCLVVSVAPEPRDIIWKNAHI----SKDIIKRKERFCNFLFILGGVLWSIPLAAIQAFGKAEQLALIPGMEWILTFDGGNLKAF-INGYLPVVALLGLILILPVIFEKVALKVENRKTMSEVHYSMVGRYFYYQVVNIYVTVTAGSIWKSLADVLEHPAEVLEILGESIPMMVGYFMAFLVTKILAGLPAIILRPGPLSRMVFLRTCFREAKLTQRELDE-VYRKENIQYGWEYPTQLLVIMIVFAYACISPIILPVGAVYFFGALMVYKKQVLYVYIPKYESGGKLFPMACDRALFGLVCGQLTFIGYSLIRQGQWQPLFLAPLPMITVYMMYYFRNTYANPSQQLSLERAVELD 662
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig79.16057.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized0.000e+093.80protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.020e-10547.54protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
ERD3.840e-10185.78protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
ERD1.020e-8595.15protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical2.050e-7638.82protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Uncharacterized1.050e-7541.25protein n=1 Tax=Thalassiosira pseudonana TaxID=351... [more]
Uncharacterized6.210e-7443.22protein n=1 Tax=Thalassiosira oceanica TaxID=15974... [more]
Uncharacterized3.170e-7343.11protein n=1 Tax=Thalassiosira pseudonana TaxID=351... [more]
Hypothetical1.250e-6940.21protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Hypothetical4.010e-6938.50protein n=2 Tax=Pseudictyota dubia TaxID=2749911 R... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig79contigE_fasciculatus_S2_contig79:431..13949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score954.1
Seed ortholog evalue2.8e-275
Seed eggNOG ortholog2880.D8LGF9
Model size2776
Hectar predicted targeting categoryother localisation
Exons16
EggNOG free text desc.ion transport
EggNOG OGsCOG5594@1,KOG1134@2759
Cds size1662
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842450.185125-UTR-E_fasciculatus_S2_contig79:430..6581696842450.185125-UTR-E_fasciculatus_S2_contig79:430..658Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig79 431..658 +
1696842450.407733-UTR-E_fasciculatus_S2_contig79:13063..139491696842450.407733-UTR-E_fasciculatus_S2_contig79:13063..13949Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig79 13064..13949 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842450.1982362-CDS-E_fasciculatus_S2_contig79:658..6671696842450.1982362-CDS-E_fasciculatus_S2_contig79:658..667Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 659..667 +
1696842450.2093635-CDS-E_fasciculatus_S2_contig79:1597..17531696842450.2093635-CDS-E_fasciculatus_S2_contig79:1597..1753Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 1598..1753 +
1696842450.2288263-CDS-E_fasciculatus_S2_contig79:2197..23051696842450.2288263-CDS-E_fasciculatus_S2_contig79:2197..2305Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 2198..2305 +
1696842450.2450836-CDS-E_fasciculatus_S2_contig79:2901..29821696842450.2450836-CDS-E_fasciculatus_S2_contig79:2901..2982Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 2902..2982 +
1696842450.2570808-CDS-E_fasciculatus_S2_contig79:3730..37951696842450.2570808-CDS-E_fasciculatus_S2_contig79:3730..3795Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 3731..3795 +
1696842450.2679393-CDS-E_fasciculatus_S2_contig79:4807..48891696842450.2679393-CDS-E_fasciculatus_S2_contig79:4807..4889Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 4808..4889 +
1696842450.279274-CDS-E_fasciculatus_S2_contig79:5406..54871696842450.279274-CDS-E_fasciculatus_S2_contig79:5406..5487Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 5407..5487 +
1696842450.2931142-CDS-E_fasciculatus_S2_contig79:5912..59901696842450.2931142-CDS-E_fasciculatus_S2_contig79:5912..5990Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 5913..5990 +
1696842450.309089-CDS-E_fasciculatus_S2_contig79:6393..64861696842450.309089-CDS-E_fasciculatus_S2_contig79:6393..6486Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 6394..6486 +
1696842450.3230665-CDS-E_fasciculatus_S2_contig79:7237..73201696842450.3230665-CDS-E_fasciculatus_S2_contig79:7237..7320Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 7238..7320 +
1696842450.334478-CDS-E_fasciculatus_S2_contig79:8248..82881696842450.334478-CDS-E_fasciculatus_S2_contig79:8248..8288Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 8249..8288 +
1696842450.3435225-CDS-E_fasciculatus_S2_contig79:8932..90521696842450.3435225-CDS-E_fasciculatus_S2_contig79:8932..9052Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 8933..9052 +
1696842450.354787-CDS-E_fasciculatus_S2_contig79:9684..97371696842450.354787-CDS-E_fasciculatus_S2_contig79:9684..9737Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 9685..9737 +
1696842450.3697774-CDS-E_fasciculatus_S2_contig79:10775..109221696842450.3697774-CDS-E_fasciculatus_S2_contig79:10775..10922Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 10776..10922 +
1696842450.3869474-CDS-E_fasciculatus_S2_contig79:11498..117591696842450.3869474-CDS-E_fasciculatus_S2_contig79:11498..11759Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 11499..11759 +
1696842450.397577-CDS-E_fasciculatus_S2_contig79:12858..130631696842450.397577-CDS-E_fasciculatus_S2_contig79:12858..13063Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig79 12859..13063 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig79.16057.1prot_E_fasciculatus_S2_contig79.16057.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig79 659..13063 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig79.16057.1

>prot_E_fasciculatus_S2_contig79.16057.1 ID=prot_E_fasciculatus_S2_contig79.16057.1|Name=mRNA_E_fasciculatus_S2_contig79.16057.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=554bp
MAKEALSSLASVGNSAFHTTRRVARGVLYLTLGQRMSTTGFVTFRQMAAC
AASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQPQARHINDLRQNVAA
CLVAAGAIFWSIPVLLIQFWASYSQLEKIFPVLADLDPDSFLYYVIAGYL
PVVLLLLLMLLLPFLFQALAYRYERRKSHSEVQQSILTRYFTYQVANIYV
TVASGSIISALQEILDDPTSVLNILGETFPAVAVYFLDVIIVKLFVGLPF
ELLRGWPLIRVLWSQRCTNRDFATEREIRTGPFGPAELLYGWVYPTLLLV
LVVCFVYAVISPFIMPAGAIFFALAYLVYKYQALYVYVPKYESGGVFWFS
VYPRVLIGLALAQLTLAGYVYVRAGITQASLILPLPALIYWYGYRSFKRY
LGPAESISMETAARIDRRGASAMAAAVKAAAEGRRGRHWQDSGRQGRAGE
DEEDDEDGGVNPDEFEPLLYAQLALTSPSVEPSDCRAPDPETRRSRVGSG
TLSSLDGAGDPSSGLPSPAALASLQAPLLGSRAAAARVAANDDRSSSADY
VEV*
back to top

mRNA from alignment at E_fasciculatus_S2_contig79:431..13949+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig79.16057.1 ID=mRNA_E_fasciculatus_S2_contig79.16057.1|Name=mRNA_E_fasciculatus_S2_contig79.16057.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=13519bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig79:431..13949+ (Ectocarpus fasciculatus EfasUO2)
GGGCGGACGGGGTCGTCGAGCCTGGACGTCGAGGGGGGCGGCGCCGCCGA
ATCAGCAAGCGGCATCGAAGAGGAGTTGGAGGCGAGGAGGAGACGTTCCA
AGAACCGTTCTCCGAGCTCCGGCGGCGACGAGCTCAAGCCCGGTCCTCGC
CCCGGAGCAACGTCCGCCTTAGACGTGGACACGCCGCTTGCCGGCGGGGC
GGCGGGCCTGATCGAGGCCGCCCCTGACATGGCGAAGGTGTGGCGGCACC
CCCGGGGGGGCGCACTGGTGTTGATATGCGTAGGACCCGGCAGTCTGCAG
GAGTAACGCTGGCGAAGGCCAAGATGGGAATGATTCATTGGTGTTGATAC
GCGTAGGACCGGATAGGCTGCAAAAGTAGACAATGGTGAGTGCTTTTGAA
GGCCTAGATGGGCATGCATTGGTGTCGATATACGCAAGCTCGGATAGACT
GCAAGAGAGGCCTTTCGAAAGCCTGTATGGGACTTGGTGCGGCCGTGATG
ACGTCCTGATGGGCAGGAGGTGGGGCGTGGGGGGTACAGGTGGAAGAGGA
TGCTCTTGCGGAAGGAGGATTGATGCAGTGCGTGGTGGTCAGCATGCTCG
TGTGGAAGAGAAGTCTGCCCAGCTACGCCCGTGTGTGTAATGTTTTGTTG
GGGTGAAAACGGCAGCATGCCCGATTTCGAAGAACAAAAGAGACATCTTG
TTGTTACCGTGACGGACTACGTTGTAGATGAGAACACGGGGGCCACGATT
TCGACATATATCTACTGCTTGCCCCCCATCAGGTCGGTCTTGCTGTCCTT
GAGTGTATTCGTGCTCTCTCATTCTGGTTGCGGCTACCCCATCCCGGATT
TTCCCCGCATTTTCCCATTTCCCATATTTTCCCTTCTCGCTTCTCCCCCC
CCCCCCCCCCCCCCCCTCCCCCTCCCCCCCCTCTTTTTTCCCCCCCCCCC
CCCCCTCCCCTCCCCCCCCCAAACCCCCCTCTCCCCCCCCCCCCTGGCCC
ACCCCCCNNNNNNNNNNTCGTTTCGGTGGTGGGCCCCCCCTGCCGGCTTT
TCCCCGCTTTTTGCCCATGTCCCCGTTTCCCCCGCGCGCTGCCCCCCCCC
CCCCCCTCTCGCTCTCCCTCTCCCACGCTTCTTTTCTCCGCCCTCCCCTC
CCTTCCCTTCCCCGCAGGAAGCTCTCTCTTCCCTCGCGTCCGTGGGCAAC
TCCGCCTTCCACACGACCAGGAGGGTCGCTCGCGGTGTCCTGTACCTCAC
CCTTGGCCAGCGCATGAGTACCACCGGCTTCGTCACCTTCCGGCAGATGG
CGGCTTGCGCGGCGTCTAGACAGGTGGGGATTAGCGATTAAGGGGGGACG
GTGGTGTGGGCAATGTTGGTGTTGACGAGGTGGGTGGTGGGCGTGTGACG
GGTGCGAAGAAAGGGAGTGGGTGCGAGGCGAGTTGTTGTGACAACAGTGA
CGTTGACTGTAACGGGCGATGCACGTGAGGAAAGGTGAGGAACTTGTTGG
TCTTGGTGTACCTGGAATTTATGTGGTCGTCGCTGCCGCTTGTACACCAA
CTCATAATGCCCTCTCTCTCTGTCTCTCTCTCTGCCTCTCTCTCTCTCTC
GACCTGTCGCTATTTCTTGCCTCTGTTGCTGCCCCTACCTCCATCTCTCT
TGCCGCATCTGTTATTCTGTATGTCTGTCTTCCTCCCTGCCTCTCTCTCG
TCTCCAATTATTGTGTGCCGCTGGACGTTGCCTGGCCTGGCTATCAAACC
ACACCTGGGCCAAACAGGTGCTGCTGGCGCCTCGGCCAGACTGGTGCGAC
TGCGAGCCTGCGCCGGACCCGCGAGACGTGGTGTGGAAGAACATCGCGGT
GCCCCAACCTCAGGCACGGCATATTGTTGTTGTTTATGGTGGTAGTACTG
CTGCTGCTGTCACCTGTTGCTGTTGTCCATGTAGTCTTACGTACTTCGAA
GTTTGCTTTTTCTGTGTGTTTATGATGTTTTTGGTGGTATTGCTGCTGTC
ATTGTTGCTGTTGCTGTTGCCATCTATGCATTGTTTAGTTGTGTGGTTTT
CTGTCGTATCTATGTGTTGTCTGCAACAATCCTTCGACGTCGTTTTTATT
GATATCTCTCTTTACAGGCCGTACTTGTCCCAACAGTGTTTGGCCCTCCC
GCAAGAGCGGTGTGAGCTCCTTGAAAGCGGGGGATTACAACCATGAATGG
ACATGTCATCAACACCCCCCTAACACATACCCAGGCAAGGATTATACGCA
CTACGTGGCACACTGCGCACATGGCTCTATTCCCCCCCCCCTGTCGCCAA
ATCAAGTGCGGCCTGCCTGCTGTATGCTTGGGAACATCATTGAACTCGTC
TGTTTGCTGGTGGAATCGGCCCTGCCTGTCGCCTTTTCCCTTTCAAGACA
CTGAGGCCGTCAACATGTCGGCCAATCCCCCCGTCCCTCCCTCCCGCCCT
GTTTCGTCCCTCTCCTCTCAGAACGACCTGAGACAGAATGTGGCTGCCTG
TTTGGTGGCCGCGGGGGCTATCTTCTGGTCTATCCCGGTCCTGCTTATCC
AAGTGCGTTCCGGTATTCCTGTCATTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTCGGTGGTGGTGTGTGTGTGCAGCGGGTGTTAATGTCGTTGTA
CAGCAGTTGTCATGGTGGTTGTTGTTGTGGTGGTGGTGGTGATTGTTGTT
TTAGTGGTCGTCGTGGTCGTCGTGGTCGTCGTCGGTGTGTTGTTGTTGTT
GTTGTCGTTGGTGATGGTGGTGGCGCGTATGTGTGGGGCGGTGTTCGCGT
CGTTGTACAGTTGTTGTGGTGCCCGTTGTGGTTGTTGTTCTTGTTGTCGT
TGTTATTGTAGTTCTCTCGACACCCCAGACCCCACCATGGTGTATCCACC
GTCCCCCCTGTTTTTTTGCTGGTGTGCGATCTGTGCGGGACTCTCCAAGG
CGGCTCGATCGTACCTTTCTAGTTCTCTTTCTAGGGTATCGTTTTGCTCT
TTGGGTGCACGCGGTGGCGTCCGCTGCTGGTTTCCTACCCCCGTGCCCCT
TGTTGGCATTCTCCTCCTTCTCCGCGACCAACCACTACTCTAGCTATGAC
GCCAACCCTGCTGCCGCTCTTCATTACCTCTACATGCTCTGACTACATCT
CGGTTTCCCTCCTACTTGTCTGCTTCCATCTAAGTAGCTCTGATTGCCCG
TCTTGCCTATCCCTTGCCGGTCTGTTGACGTTCACCTCTCTCTCTCTGTC
TCTCTCGCTCCCTCCCTCCCTCCGTTCTGGCTCCCCTTCGTGCGGTGTAG
TTCTGGGCATCTTACAGTCAACTCGAGAAGATATTCCCGGTACTGGCCGA
CCTTGACCCGGACAGGTTTGTTCGTTTTGTGTGTCCCGTGAAAGCAAAAA
ACGCGTATTTCACCGTATTTCACCCTCGGGCATGGCAGAAAATCTAACAG
AGATCAGGGAGCGAGACACCACTTCCCCAAAATACAAGTGGTGTCGGCAC
TCTTGAATTTTTCACTAAATAGCAGATATGAATGCCGAAGTGCGAAGGGT
GACGACAGCTTTTTGACAAGTCTTCCGAAGAGCTAAACAAGTTGTTCTCC
GTTTCACTGCCTGATTTTACACTCTGCGACGTACGGTAGTACACAAAAAC
CGCCCTAATTTTCCCCCCCTTCACACCCTACCACAAGCGATTTCAGCAAC
TAGCCGCGTGTACCGGGCACGCGACCAACATGACTCCGGTATCGTTTCCG
GAACTGCCGAGTTTTGTGCACCGAACTGCTCCGATCAAGCAGCACCACTC
CCGTAGATAGCGCGCATGTACAGCGTCAATGTAGCCGGCGCAGGACGTGG
TAACTGTCATTTGCCATCGTCGTCGTTGGCGTCGGGTGCTGTGCTGGTGG
TGGTTTTGTCGTCATAGAGCCCGGACGCTTTGTTTCGATGGACCCCTTAC
GCCGTTCGTGCTTGGTGTGTTTTTGTCTCCGCCATCCCCTTACTGCTCTC
ACTCAGCTTCTCGGTACACGCAATGCTGCGTTGGGGGTCGCACACAGCAG
TAGCGAGGGTGCCTGCGTTTGGCTGGCAGGAGATCAACAATTTCATCTAG
AGGAAGGGCTTCATCCACACGCGGACGAACCTTCAGCCTCTCGTATGATC
AACTTTTTCAAATCTTGCTGCCACACCGCGATGTCTGGCGTTTCCATCTG
CACCTCTTTCGTCAAAGACTTTAGAGTCTACCTAACCCCGCCTCTCCCGT
CCTGCCTTTGCTACTGGTACTTGGTGAACCTAATATGACTGTTCCATGTT
CTTATTCACCCCTTTCATCTTGCGGTGCCGCTGTCGCGCACGCTGGTGTC
TATTTCTGTCCGTTCTCGCCGAAACAGCTTCCTGTACTACGTGATTGCGG
GCTATCTTCCGGTCGTCCTGCTCCTGCTGCTGATGCTTTTGCTACCCTTC
CTTTTCCAGGTGACCGCTGTGTACGGGACGCCGTCGGGGGTTCGCGAAAT
GAAAATCGGGTTGATAAAAAGTAAAAAGAGTTTTTGTCCTTACTGCTGTT
GTTGGCGTTGCTTCCGCGGGGAAAATCCACCGATTAGGTTGCCCATCGGC
ACACTTACCCTTCAAGCCATAGTCTACTAAGAAGTTCATCTCCCACTCTT
TCCATTGCCGCTTCTCAAGAAGAAGCCCGTGATCTGACCTCATTCTTCGC
TACTAGCCGATACGTGAGGGGTCGCCAGCTTCACAGTAGCGCCCAGTTTG
GTGACGTGCTGCGTCGAACGTACGCAATGTATTTCTCGAAGGCGAAGCAT
CACAACCAAGCTGAACTTTACCACCCACCTGCCTAAAAGGAACTAACGGG
CGTCGCTAGGTCGTTGTCCACAGCCTAACGCTACGCCAACCTTCTGACCT
TTGTGGTGTCTCTCCGGATTACCGCCCGCGTGCTGCTATCTTTTTTGGCG
CTACGTCTCTTTCGAGAGTACTATAGGCCTTAGCCTACCGGTACGAGCGT
CGAAAGTCCCACAGCGAGGTGCAGCAGTCGATTCTGACGCGCTACTTCAC
GTACCAGGTATAACAACACATCGACAGGCCCCACCTCCGCCGCCGCTGTC
GCTAATGGCATCTATCAAACCGGATACTTTTTTTATTCATTCAAGTGTTT
TGACCCCTTTTTATTTGTTGTCATCCGAGTCAGCCTCCCGAGCGAAAGGA
GAAATTGTCCAGGCCAGCCGTGCGCATGTCGTTTGGACATATGTTGGTAG
GTTCGTCCGCGCGCACACCGCACCAGGGTTGCTTTCTCAGTCTCTTACCC
CCCCCCAGCCCTCACCGGCGGTTACGTTCCTCTCCGTATTTATTTGTCGA
TGAAAAAATGAGTGAAGGTTTGAAACAAATCCTCCCTGCCCCCGCCCCTG
TAGCGTCTACACAGCTGACCTTGTGCGCCGTCGCTGGTTTTGTGTGTTGT
GTGTTGTTTTTGTGTGCGTGTTGTCAATGCAGGTTGCGAACATCTACGTT
ACCGTAGCCTCTGGATCTATCATCTCGGCTCTCCAGGAGATCCTCGACGA
CCCCACCTCGGTGAGAGACCCCCCCCCCCCTCCTCCTTATTCGATGGCAC
GAAACCCCCATGCACCTACCAAAACCCGATGAATAAATCGCTTGGGACAA
CCAGGAGAAGGAATGACACAAGCAGAGAACAAGCAATACCCCTCTTGATA
CTACAATACTGAAGGTTGGATGACGCAAGCGGAAAACAAGGAAGCCCCCA
CTTGATGACACATGACCGAAGGGTAACGACGACCACAACGAAACACTTTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTCTTCAT
ATTAAGAACCGTTCCGGTCTTCGCTCAGTACCTTCTATTGTCCGTACTGG
TCCAACTGACGGTCTTCTAGCGCAGAAACCATTTCCAATCTATGTGTGTC
GTCTGTAAAACAGGTGTTGAACATCCTCGGCGAGACTTTCCCCGCCGTGG
CGGTGTACTTCTTGGATGTGATCATCGTCAAGCTTTTCGTCGGGCTACCG
TTTGAGGTGAGAAGAGGACGAGTTGGGAGGCACCAGCAAGGGAAGTTGCC
GATGCCACTGCTGCCGGTCGTATTGCTCTCCACCGCTCGCCGCTGCAACC
CTCACCCCTCCGAGCGTTGTCGGGCATCATGAAGACAGGCTAGTGTGCAT
CAACACTCGTGTTGTTAACTTTTTCATTTTTTTTTTGCCTGTGTTTCATT
CCCGATACCTTTGTGTGTTGCGGGCGAAAGTACTGCTGTGTTTGTTCTCA
TGCTAGTGGGAAACTGTTCCTTTTATTCTTCGCACGTGGAGATGGGAGGG
GGGCGGGTAGCGTCCTCTTGTCTCTGATTTTCACATAGGGTTGTATCGCT
GAAAACGGGAGTCGGCAGCAGAGGCGATTTTTTCGAGAGCAGAGGCGCAT
GCCCGAGGGGAATACAAGCGACCAAATTGTCGACCCGATTTACCAGCGCC
GGCAAAACGCCCTTGGGGCCATAACCGCGTTTTTTTCGCGGGTTTCCCGG
TCCAACAGAAATGTAGAGTTGGTGAACCCTGGTGGGCACCAGAAAACATG
GGTGTTTGACGGGTCGACCTGGTTCATTTTGAATGGGAGAAGTTTGGTCG
ACAGGCTTTGAACGTAGCGGGCACAAGGGCGGTATGTGTGTATCATCAGA
CCACCTATATCATCAGACCACCTAAGATTTCGTACTTGTTCCTCTCGTGG
GTGCATGACCACCCCCCCCCCCCCATATGGGCGAATCTCTTTCACGCGTT
TTGCCAGCTTCTTCGAGGGTGGCCTCTGATTCGAGTGCTGTGGTCTCAGC
GATGCACCAACCGGGACTTTGCCACGGAGAGAGAGATCAGGTAATGTGAT
AACTCGACGCAATCAAACAGGATCCGAATATATATATATGAACACTCATT
CAAATACGGAACGGTTGATTAATACTAGTAGTGGGTTTGACACGTTTGTA
ATCTTCCGGTCCGCATACAAGCATCCGTTGGAGACCAAAGAAAACCAGCT
TAGTAACGGTACTTGAAGATGCCTTTTACGACTTTCCAGATGTACGGGGG
ATCACTGATGCGTGTGTTTGGTTGTCTCACGTGGTGAAGAAGAGTCGCTT
GGCAACACGGCGTCTACCATCTGTAGTGTAGGGCGTACAGACCAAAACGA
GAGCGACGACAGGAACGTTCCCAGCAACACTTGTTATCCACGTTCGGAAT
TGCCGTAAACGGACCCGCTGACAATAGACCGCTAAACTCGCTACGGAGCA
CGACCCCCCGATGGCCCGTACCGGGTAATGACTCGAGCGTGGTAAGGAGA
GTCATACGCCGAAACTCGTGTACTCCGCGTCATCCGCCTGAAAGCTGTAT
GCACGTGAAGGACGCGACCGGAACACGCATCCATCGCAGGTCTTGACCCG
TGGACGATGCTCGTTGTCGATTTTGTGTTGTCGTTGATGGGAATCACCGT
GCTGTGCCACGGTCGTGAAACTGCCGCTCGTTGTCTACAAGAGTCTTGTG
CAAAGATTGATTGTGAACGGATGCAAACAGCAAGGTGGACGAAAAGTAAT
TTCGAGCTATGATGCTCTAATGCTAGGTTACAGCACACGCACAGCAGCAA
AACCGGTTCACACACGCACACGCACACGCCCCCGCCTCGCGCACGCGCGC
GCGTAGAATCCGTCCACAGCCTCCTACGTGACGAAACCTGGCCGAGTTTT
GACTCAGTCATCCCATCAACTCCCGTCCGCGCATGCTCGTGTTATCGTTT
GTTAATTGTGCCTCGCAGAACTGGCCCCTTCGGCCCGGCGGAGCTTTTGT
ACGGATGGGTAAGATCATGACAAGACCGTTGTTCGATCAAAATATATTTA
CCGGCCGGATGCATGTTGGGACGTTTTGGGGCGGCCCGGACGCACAGATA
CTTCGTGTGCGCGTCCGCCGCACCCATTTGGGTGATACCTACCGGTTTCG
CTGTAGTAGATTCTTTGCCGTCCGTGTGGCGCCTTTCTAGTCGTCGGATT
TCGAGTCCCACCTAGCCTGACTGTCCACCAGTCCCGCCCGTAACCTGGCG
CCTTTCTTATCGTCGCACTTCGAGTCCCACCTAACCTGGCTGTTCACTAG
TCCCCCCGTAACCTGTAGAATGGTTGGACGTGTTCCCGCTCCGAAGCACC
GCCGTTGGGAGCCTGACAGTCCCCCCCCCTGTGCTTGGTCCCTCTATGGT
ATATATATATATATTTTGTTTTTTGTCGCGTCTGCCTCCAGTCTTGGCAC
CTCCTGGGTTGCGATTCGTTTGCCACTCGTTTTTCTTGCCGTGTTTTCTC
TCTGTGTGTCAGCTCGCCCCCCGCTCTTTAGCCACGTTTTGGCCGGCACA
GTCCACACACCCCTATTGCCTATGTGTAAACGCTACCAAGTATTATGTTT
TGCCGGCTTCGTTTATGATGGCGGCATTTTCATCATTTCAACCACCCCTC
AGGTGTACCCGACCCTCCTCCTGGTGCTGGTGGTCTGCTTCGTGTACGCT
GTGATCAGCCCCTTCATCATGCCGGCGGGCGCTATTTTCTTCGCCTTGGC
TTACCTTGTCTACAAGTACCAGGTGCGTTTGACTCCAACGACCCGGAAAT
CACAAGGCGGTGGGGGTCGAGGAGAATGAATAGATCCACCTTCGTGTTGC
AGAATACATACAACTCTTGTATTGACCAATATTACCAACATCACCACAAT
GTGTTCAAGTCGAAAGAAGATCGCAGCGTGCTGTGTGTAAGCGCGGGCGT
GTTATGCCCGTCGCGCTGAACAGAGGCCCTTGGTTTTCCGCACGCCTCGT
TCCACCACCGACCGGACCTCAAAAGAAGGACAATGGTGGTGGATTTGGGG
TGGCTTATTTTCCTGTTGCGGTTGCGGTTGTTCCCGTTCGAGGGCGGCGA
TTATCCTTGTCGGAGCCCAACCCTAGAGACGTAAGCACAAAAGTCGTTCC
GCAGCTATCTTGATATTTGTTGATATTTGATGTCTAGCTGGTATAGTGAG
GACGGCCGTATACGCAGACCCTATTCCCTAACCCTAACCCTATCCCTAAC
CCAACTTCCCCTGTTGTATGCTTTATCCATCATGTTTTCTGAGTAACAAA
AGCCTGCGAAGGCTGCTGTGTAGTGATTTGCTTGTGTCATGCCGACCTCC
TCCCTCCCCCCGCACCCCTTGTCATCGTCTCCTTTTGGTCGCTCTGTCTG
GCAGGCCCTCTACGTGTACGTCCCCAAGTACGAGAGCGGCGGAGTTTTCT
GGTTCAGGTCTGTGTCTCGTTTGGTGGAACCTTCCCGCGCATTGCTTGCA
CGCTTGCATTCCGATGCGTGAAGTTAACAAGTTCATTTGGACCTGCGTGA
AATTCACGATCGCCAAAATGTTTGACAGCAGTCTTTGGCGATGCCAATGT
TGTATTGTATGTATGCCCAGCCTTCTGTGTTTTTCTTACCACGATCAGCA
TTTGGTGGTGGTGATGGTGGTGATGGTGAGCCGTGCTGCTTGCCCGCGTG
CCTCACTGTGCCTCGCAGAAAGGTTACCCGTTTTCCCAGGGAGGTTCGAA
GACCGTTGTCATGCGCTGGCGTGTTGACGAAGGGGTTGTTCATGCGGCGG
CCGCACATGTTCTACCGTGCTTTGGCGTGTTTAGGAGTGCTGTCTCTGTC
GAGGTGTCGATCTTGTGCGGGTTTGAGCCTCGTCCCCTTTCCCGGCACTC
CTGTTGGCAGCGCAGCTGGGTGGATGTATCGCTCGCACACATTTGCATAA
TCTCTCCCTCGTAAGGTCTTCTCTTGTTCAGTCACAGAGACCTAACCCCG
CGCCGACGTTCTGATTAGCGTTGCTTCTGGGCAAACAACCTTTTTGCGTC
TTGTCGTGTCGGGCCAGCAATCGTTCGCGTTCGCGCAGTCTTCGTACACG
CGTGTGTGTGACGTGTGCCTCCGGCGCGAGGCGTGTACCATAGGTTGCGT
ATGATACCACACCCCCTTAACTGGATATCATAACGATTTGTTTTGGGGGC
ACAAACGGTGACTGTGCCGAAAATGGCGGCGTTGGAACCGTCACGTCGAG
AGATAGCTTTCCGAAAACGTCGTGTTTGGTTTCGACATCCTCTTCGTCGT
GGAGTGATCGACCTTTGAAAATCGGTCCAGGGGGTGTGGTATCTTATGCA
ACCTACGCTACCCTTGCGCTGTGAGCCGACCAGCCCTTCGGCTTTGGACA
CACACCAAAATTCTCTCGATCTTGCTGTACGTGTGGCGTTGAACTTGCGA
TGTGTTTTCGCCACCCTCTTCTCCCCGACGTAACTTGTCCCGCAGCGTTT
ACCCGCGAGTGCTCATTGGACTGGCACTCGCTCAGCTTACCCTAGCGGGG
TACGTCTACGTCCGAGCGGGGATCACTCAGGCCTCGCTGATCTTACCGCT
GCCAGCGTTGATCTACTGGTACGGCTACAGGAGCTTCAAAAGGTGAGGGG
GACAGGATAGAACACGCCATCCCGCTTTTCGAAAACCTCTTCTGTAGATA
CCGTTTGGTGGCTTTGCCTAAATTGTTGCTAGTACCGATGCTGCTATACA
TCCGGCAAGACAACCCCGAGTACGGAGCTCTCAACCACGTTGAGAACATT
CATGGCCCTGAAGGCGCTGTGGTTACGAAACAGCGGTCCACTTTCTTCCT
CCAAAGTGTCATGAGTGCACGTAGCTGATGTCGTGACACAGCAGCTTGGC
GGCATGAGGCACGCAGGCGGGCTGTGGGGCTACGCTGCTGTTCTCCCCAA
CCAGGAGTGTCTCGATGGTTTTCAACCACAGCCAATGCCGATGTCATCAA
TAGCAGCGTCGCAACCTTGCATGTCATGCCTTTTTTCTTGCTTTTGCACA
ACTCTAGGCGCAGAGGTCAGTCATACCATCAACGCCACCCCTCCCTGGTT
CATTCTTGTGAACCGTAGCCTGGACCGGCGAAATCCCGGCATATCGCTGC
GTAGGAATGCGAGGCCAAAGGTCTAACGACTACGGCATGCGCTACACCCG
CCCCGCCATCCTCTCCAGGTATCTCGGCCCGGCTGAGAGCATCTCGATGG
AGACTGCTGCGAGGATCGACAGGCGAGGAGCGTCGGCCATGGCCGCGGCG
GTCAAGGCGGCCGCCGAGGGCCGCAGGGGGAGGCACTGGCAGGACAGCGG
CAGGCAGGGTAGAGCTGGCGAAGACGAGGAGGACGATGAGGACGGCGGGG
TTAACCCGGACGAGTTCGAGCCTCTCCTGTACGCGCAGCTGGCGCTCACG
TCCCCTTCGGTGGAACCCAGCGATTGCAGGTGAAAAATCAGCAGTAACAT
GAGTAGTTCGCGAAAACGTATTTTGCTTCGATGACGTGTTTGGGAATGGT
GCCCCCCCTACCTGATGAAATAACGGGCACTCGAGAGTGACGTGTGGACC
GGAGGTGGTCGTCGCAAGCTACCATTGATTTTCTTGCGCCATCTGAATGA
TGCAAGAACCGGCCGCGTGTTCTCGATTTACAAACGAAAAACCAATACCA
GCCCGCGCGAAAGTGCGGTAGAGGCGTCGCAGCGGCGCGAGCGTGGAACG
TCCCGGGAAGGAGGGGCCGACTCCGGCGGCGCGGGCCGCAATCGCTCCGG
CTCTCGAGGCGGTATTGTGGTCCAAGAAAGAGGGGACGCCACCGTAACGC
CTTTCCCGGAAGCGCGACACAAGCCCGGCGCCGCCGCCGTCGGAGACAGA
GCCTTGGTAGTCAGCGACAACGATCGCAGCCCCGAGGAGCTGAGGTTGCC
TTCTTCACCCTTGCGGGCAGCGGGGGTGGCGGTGGACGGGCCGGCGGGAA
AGCCGTCTGCCGAGGCTAGGAAAGAGGAGCAGGGGGCCGAGCGGGCGTTG
AACGACGAGGAGCACGCGCTCGGACTGGAAAACGGCGCGGCGGCGGAGGG
GCCGGTGATAGTGTCTGCCAACGCCGCGGCTGATGCGGCGGCGCTCGCGG
CATCGGACCGGAACGCGAACGGCTGGTTCCAACCCGACGGCCTGATCGAC
AACAGCACCGAGGGTCGTCCCCTGACGAGGAGGGAAAAAGAAGGCCTGGA
GCGCCGCGCTCTGGCGGCCAAGTCTTTGGCCTCCTTGAACCCGCGGGTAA
ATGGGTGAAGACGCAATGCGCACTGGGCTTCTCCTGTTGCGCGGCGGCTG
TGCCATGGGGTCCTCGTTCCGCACCGTTTGCGTATTGTGGAACGGCTTCC
GTGAACAACCGATGCGTACCCTCACGAGCTCACACCCTCTTGTGTTTCTC
GGTGATGTCACATTTCCGAGTGCTTCGACCAAGCGGGCTTCGAGCAAAGT
TGCCTTTCACCTCTAAAAACGTCTCCCCCCCACCCCGGCGCCGTGCCCCA
TGCGTCCTGCTTGCTTGTCTCCCCTCAGGGCCCCTGACCCGGAGACACGA
AGAAGTCGCGTGGGCTCCGGGACTCTCTCGAGCTTGGATGGCGCGGGGGA
TCCGTCCTCGGGGTTACCAAGCCCAGCGGCGCTCGCCTCGCTCCAAGCAC
CGCTCCTCGGATCGAGGGCCGCGGCAGCCAGGGTCGCGGCGAACGACGAT
CGCTCATCGAGCGCTGACTACGTAGAGGTCTAGGTGTGATTGCGTGTGAG
CGATGGTGCATGGGTTGGGTGTTTAGGGAGGGGTGGCCTGACCCCGAGGG
AGCGCGATTTAGGCTTTACTGTACAGGTGGAAAGCAAGGCACGTGTCGAT
GCCAAAAGCAACGGTCGATGTCCAGCACTGGTGAATACATCGGGCTCTTG
GTGTCGCCATCGCGGCGAACAACAGCTACTGTACCAAACCCTGGTGGCAC
TATAGAGAGGGGATAGACATGAATGACAATCGTGCGTTTTTGTCTCAGTG
GACCGGAAGAAAATGTTATCTGTTTGCTTCCTGGATGTGGACGCGGCGGG
GCTCGTTGTGGAGACCTGTTTAGTGTTTCCTTTAGATGTGGCGGGTGCTG
TAGTATCATTTCCTTTGGATGTGATCGCTGTTTTATTGATACCTTCGGAT
GCGACCACGTGGATGCCCCGACGTCTCTAGAACGTGTGTAGATCTCTACA
GTATGTTGATGGACGAGGCGGAAGACGGCATATAAGACAAAACCCCCGTA
AAAACGATGGCCTACGGGGTAATGCCAATCAAGCACCAGATTGGGGTGCT
GGTTGCGAGCATAGTGGAGCCGCGGGTTCCACTGCAGTCAACGATATGTT
TTTTCGGATGGAGGAAATCGGGAGAGAGAACTGAAGACTAAGATCGATCA
AACACCAACAGAGAAACGCTCCACAACCTTCGAGAGTCCCGAGCAGCTTA
ATTGCAAGGGCTGGCCTAACCCTTGTTCAAGAGAGGAGGGGTTTGCACTT
GAAACAGGTGAAATCGCAGACGAGGTGGCCTTTAACGGAATTTCACTCTT
CTTTCGCGTTGGACAACATCGAACAAGTGGGATCATTTGGAGGTGGCCTA
TGCCTTCATCCAGCCTCGG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig79:431..13949+

>mRNA_E_fasciculatus_S2_contig79.16057.1 ID=mRNA_E_fasciculatus_S2_contig79.16057.1|Name=mRNA_E_fasciculatus_S2_contig79.16057.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1662bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig79:431..13949+ (Ectocarpus fasciculatus EfasUO2)
ATGGCGAAGGAAGCTCTCTCTTCCCTCGCGTCCGTGGGCAACTCCGCCTT
CCACACGACCAGGAGGGTCGCTCGCGGTGTCCTGTACCTCACCCTTGGCC
AGCGCATGAGTACCACCGGCTTCGTCACCTTCCGGCAGATGGCGGCTTGC
GCGGCGTCTAGACAGGTGCTGCTGGCGCCTCGGCCAGACTGGTGCGACTG
CGAGCCTGCGCCGGACCCGCGAGACGTGGTGTGGAAGAACATCGCGGTGC
CCCAACCTCAGGCACGGCATATTAACGACCTGAGACAGAATGTGGCTGCC
TGTTTGGTGGCCGCGGGGGCTATCTTCTGGTCTATCCCGGTCCTGCTTAT
CCAATTCTGGGCATCTTACAGTCAACTCGAGAAGATATTCCCGGTACTGG
CCGACCTTGACCCGGACAGCTTCCTGTACTACGTGATTGCGGGCTATCTT
CCGGTCGTCCTGCTCCTGCTGCTGATGCTTTTGCTACCCTTCCTTTTCCA
GGCCTTAGCCTACCGGTACGAGCGTCGAAAGTCCCACAGCGAGGTGCAGC
AGTCGATTCTGACGCGCTACTTCACGTACCAGGTTGCGAACATCTACGTT
ACCGTAGCCTCTGGATCTATCATCTCGGCTCTCCAGGAGATCCTCGACGA
CCCCACCTCGGTGTTGAACATCCTCGGCGAGACTTTCCCCGCCGTGGCGG
TGTACTTCTTGGATGTGATCATCGTCAAGCTTTTCGTCGGGCTACCGTTT
GAGCTTCTTCGAGGGTGGCCTCTGATTCGAGTGCTGTGGTCTCAGCGATG
CACCAACCGGGACTTTGCCACGGAGAGAGAGATCAGAACTGGCCCCTTCG
GCCCGGCGGAGCTTTTGTACGGATGGGTGTACCCGACCCTCCTCCTGGTG
CTGGTGGTCTGCTTCGTGTACGCTGTGATCAGCCCCTTCATCATGCCGGC
GGGCGCTATTTTCTTCGCCTTGGCTTACCTTGTCTACAAGTACCAGGCCC
TCTACGTGTACGTCCCCAAGTACGAGAGCGGCGGAGTTTTCTGGTTCAGC
GTTTACCCGCGAGTGCTCATTGGACTGGCACTCGCTCAGCTTACCCTAGC
GGGGTACGTCTACGTCCGAGCGGGGATCACTCAGGCCTCGCTGATCTTAC
CGCTGCCAGCGTTGATCTACTGGTACGGCTACAGGAGCTTCAAAAGGTAT
CTCGGCCCGGCTGAGAGCATCTCGATGGAGACTGCTGCGAGGATCGACAG
GCGAGGAGCGTCGGCCATGGCCGCGGCGGTCAAGGCGGCCGCCGAGGGCC
GCAGGGGGAGGCACTGGCAGGACAGCGGCAGGCAGGGTAGAGCTGGCGAA
GACGAGGAGGACGATGAGGACGGCGGGGTTAACCCGGACGAGTTCGAGCC
TCTCCTGTACGCGCAGCTGGCGCTCACGTCCCCTTCGGTGGAACCCAGCG
ATTGCAGGGCCCCTGACCCGGAGACACGAAGAAGTCGCGTGGGCTCCGGG
ACTCTCTCGAGCTTGGATGGCGCGGGGGATCCGTCCTCGGGGTTACCAAG
CCCAGCGGCGCTCGCCTCGCTCCAAGCACCGCTCCTCGGATCGAGGGCCG
CGGCAGCCAGGGTCGCGGCGAACGACGATCGCTCATCGAGCGCTGACTAC
GTAGAGGTCTAG
back to top