mRNA_E_fasciculatus_S2_contig7899.16056.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7899.16056.1
Unique NamemRNA_E_fasciculatus_S2_contig7899.16056.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC6_9PHAE)

HSP 1 Score: 534 bits (1375), Expect = 6.610e-187
Identity = 277/293 (94.54%), Postives = 282/293 (96.25%), Query Frame = 1
Query:    1 QAKNCGPTTSELEGYRKVLKAILEDSRVTPQEVKDMLDARERFNITAEAHLRVLSELGESQMRLDALMEAKGGISRDSFLAMVDIDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGAHTDGFGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQFNQCDERGDGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGSGLDRQEFVRAVQAALEGGR 879
            QAK+ GPT SELEGY+KVLKAILEDSRVTPQEVKDMLDARERFNITAEAHLRVL+ELGESQMRLDALMEAKGGI  DSFLAMVDIDGDGLISYEEYMLFRTLLS PQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGG HTDGFGDVADRLFFAGNGSGKLT EQFSMFVRLLQREALVMQFNQCDERG G+L+A  FAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEG GLDRQEFVRAVQAALEGGR
Sbjct:  131 QAKHHGPTASELEGYKKVLKAILEDSRVTPQEVKDMLDARERFNITAEAHLRVLAELGESQMRLDALMEAKGGIPIDSFLAMVDIDGDGLISYEEYMLFRTLLSFPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGTHTDGFGDVADRLFFAGNGSGKLTFEQFSMFVRLLQREALVMQFNQCDERGGGMLSATGFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGRGLDRQEFVRAVQAALEGGR 423          
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD3_ECTSI)

HSP 1 Score: 439 bits (1128), Expect = 3.330e-152
Identity = 226/232 (97.41%), Postives = 229/232 (98.71%), Query Frame = 1
Query:  184 MRLDALMEAKGGISRDSFLAMVDIDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGAHTDGFGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQFNQCDERGDGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGSGLDRQEFVRAVQAALEGGR 879
            MRLDALMEAKGGISRDSFLAMVD+DGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGG +TDGFGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQFNQCDERGDG+LTA DFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEG GLDRQEFVRAVQAALEGGR
Sbjct:    1 MRLDALMEAKGGISRDSFLAMVDMDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGTNTDGFGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQFNQCDERGDGMLTATDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGRGLDRQEFVRAVQAALEGGR 232          
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPN4_9STRA)

HSP 1 Score: 202 bits (514), Expect = 5.040e-59
Identity = 122/292 (41.78%), Postives = 169/292 (57.88%), Query Frame = 1
Query:    1 QAKNCGPTTSELEGYRKVLKAILEDSRVTPQEVKDMLDARERFNITAEAHLRVLSELGESQMRLDALMEAKGGISRDSFLAMVDIDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEG-GAHTDGFGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQFNQCDERGDGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGSGLDRQEFVRAVQAALEG 873
            QA+   P   +++ Y  +L+ +L D RVT +E   ++ ARE  +I A +HL  L  L  +    +AL+E  G   R +F  +VD+DGDGLISYEEYMLF TLL++P R+L++ F MFD D SG V++ E ++FMQVLR ET  GR E  GA        A R  F G  +  L+L  F  F R L+   L +QF   D    G L   +F KFL + V+ DR++      RA++ A+  L   I+L DF+AF  +L+ L  +EVAM V+G+ EG  L   EFVRA  AA+ G
Sbjct:   31 QARYLAPKREQMDEYVALLQEVLADRRVTKEECARLVAARESLSIDAPSHLEALRRLDVTPGAFEALLEGCGASHRSAFFKLVDLDGDGLISYEEYMLFHTLLAIPPRRLALVFHMFDADGSGTVEAAEFDAFMQVLRHETRAGRLETPGARPPAHELSAYRSLFRGRPA--LSLPDFLAFARALREAVLELQFASWDADASGTLDGAEFGKFLASCVSADRSLRAALRARADAPAVRALTRPIALADFVAFHGLLESLDALEVAMAVAGTEEGVTL--AEFVRATSAAMGG 318          
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKD6_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.480e-39
Identity = 103/306 (33.66%), Postives = 163/306 (53.27%), Query Frame = 1
Query:   19 PTTSELEGYRKVLKAIL-EDSRVTPQEVKDMLDARERFNITAEAHLRVLSELGESQMRLDALMEAKGGISRD-SFLAMVDIDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGAHTDG-------FGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQFNQC------------DERGDGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGSGLDRQEFVRAVQAALEG 873
            P +  ++ Y   LK +L E   VTP +V  +L  R+   I  E H++ L  L  +    +  +E  GG +R+ SF  +VD DGDGLISY EYM F TLL++P+R+  +AF+MFD D +G +D  E +  + ++R  T  GR +     +        FG++A            L+ + F  F R LQ+E L +Q +              D  G+  L+  +F  FLV+ VN  +N   +++ R E   + D+K  IS +DF+ F  +L+HL E++VA+ +S  +E  GL++++F RA +AAL G
Sbjct:  112 PASEAVDKYVAQLKELLLETVDVTPADVSALLAFRDEHQIDFETHVKALRNLQITNSEFEQFVEIHGGPAREKSFFDLVDADGDGLISYAEYMFFNTLLAIPERQFELAFKMFDSDGNGRLDHREFKHIIDLMRLRTPAGRQDRSLKEEDAPVFKHLFGELATET---------LSYDDFLAFRRALQQEILRIQISSSASFICSCYTTDYDLDGNNELSPREFGMFLVSHVN--QNQIGKWVERVEE--LHDMKGTISEQDFINFSVLLEHLDELKVAITIS--MEDHGLNKEQFQRATKAALRG 402          
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Z0H0_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.140e-36
Identity = 93/291 (31.96%), Postives = 161/291 (55.33%), Query Frame = 1
Query:   37 EGYRKVLKAILEDSRVTPQEVKDMLDARERFNITAEAHLRVLSELGESQMRLDALMEAKGGISRD-SFLAMVDIDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGAHTDGFGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQFN-----QC----DERGDGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGSGLDRQEFVRAVQAALEGGR 879
            E  R+V + +++   VT Q+V+ +L  ++  ++  E H++ L  L  +    D  +   GG +R  +F  +VD DGDGLISY EYM F TLL++P+R+  +AF+MFD DD+G +D  E +  ++++R  T  GR +   H D    +   LF     +  L+ E F  F R L++E + +Q +      C    D  GDG L+  +F  FLV+ V  D+   + ++ R +   +  L+  I+ ++F+ F   L+HL E++VAM +   ++  G+++ +F RA +AA+ G +
Sbjct:  130 EYQRRVQRLLIDKDNVTNQDVQQLLAFKDAQHVDFETHVKTLHALQVTNAEFDQFVVLHGGPARPKTFFDLVDADGDGLISYPEYMFFNTLLAIPERQFELAFKMFDTDDNGKLDHREFKQIIELMRLRTPAGRQDRSLHDDDDVPIFKHLF-GELATESLSYEDFCAFRRDLKQEIMRIQISFSPRYACCSGYDVDGDGTLSPREFGMFLVSHV--DQRHIEMWVDRVDK--LRSLEGHITEQEFMDFNVFLEHLDELKVAMDLV--MQERGVNKDQFQRATKAAVRGSK 413          
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z3B6_PHYSP)

HSP 1 Score: 139 bits (349), Expect = 2.140e-34
Identity = 90/279 (32.26%), Postives = 146/279 (52.33%), Query Frame = 1
Query:   46 RKVLKAILEDSRVTPQEVKDMLDARERFNITAEAHLRVLSELGESQMRLDALMEAKGGISRD-SFLAMVDIDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGAHTDGFGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQ----------------------------FNQCDERGDGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAM 795
            R+V + +++   VT Q+V+++L  RE+ ++  E H++ L  L  +    D  +   GG +R  +F  +VD DGDGLISY EYM F TLL++P+R+  +AF+MFD DD+G +D  E +  M+++R  T  GR +   H D    +   LF     +  L+ E F  F R L++E + +Q                            F Q D  GDG L+  +F  FLV+ V  D+   + ++ R +   + +LK  I+ ++F+ F   L+HL E++VAM
Sbjct:   47 RRVQRLLIDKDNVTTQDVQELLAFREKSHVDFETHVKTLHALHVTNAEFDQFVVLHGGPARPKTFFDLVDADGDGLISYPEYMFFNTLLAIPERQFELAFKMFDTDDNGKLDHREFKQIMELMRLRTPAGRQDRSLHDDDDVPIFKHLF-GELATQSLSYEDFCAFRRDLKQEIMRIQISFPPRFDLFMFWGCSRDLYWFPLTPVYFEQYDVDGDGTLSPREFGMFLVSHV--DQRHIEMWVDRVDR--LRNLKGHITEQEFMDFNVFLEHLDELKVAM 320          
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0V2_GLOUD)

HSP 1 Score: 130 bits (327), Expect = 8.610e-32
Identity = 92/291 (31.62%), Postives = 149/291 (51.20%), Query Frame = 1
Query:   10 NCGPTTSEL-EGYRKVLKAI-LEDSRVTPQEVKDMLDARERFNITAEAHLRVLSELGESQMRLDALMEAKGG-ISRDSFLAMVDIDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGAHTDGFGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQFNQCDERGDGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGSGLDRQEFVRAVQAALEG 873
            N G  + E+ + Y  ++K + LE   VT  +V  ++  RE   I  E H++VL  L  +    D  +   GG +   SF  +VD DGDGLISY EYM F TLL++P+ +  +AF+MFD D +G +D  E +  + ++R  T  GR +                       +   E+ +   + L  E     F   D   D  L+  +F  FLV+ VN  +    ++++R E   + D+K  IS ++F+ F E+L+HL E+EVA+ +   ++  GL++++F RA +AAL G
Sbjct:   33 NAGKPSKEIVDAYTNLVKELFLETVEVTAADVNALVAFREENQIDFETHVKVLRNLQITNAEFDQFVVIHGGPVRAKSFFDLVDADGDGLISYAEYMFFNTLLAIPEHQFELAFKMFDSDGNGRLDHREFKQIIDLMRLRTPAGRQD-----------------------RSLKEEDAPIFKHLFGELATYAFYDLDGNKD--LSPREFGMFLVSHVN--QKEIGKWVKRVEM--LRDMKGHISEQEFMNFTELLEHLDELEVAIDLI--MQEHGLNKEQFQRATKAALRG 292          
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVK4_SAPPC)

HSP 1 Score: 131 bits (329), Expect = 2.670e-31
Identity = 85/247 (34.41%), Postives = 137/247 (55.47%), Query Frame = 1
Query:  142 EAHLRVLSELGESQMRLDALMEAKGG-ISRD-SFLAMVDIDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGAHTDGFGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQFNQCDERGDGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGSGLDRQEFVRAVQAALEGG 876
            + HL VL +L  ++   D  +   GG +SR  +F  +VD DGDGLISY EYM F TLLS+P+R+  +AF+MFD D +G +D  E +  M+++R  T  GR +     D       +  F    +  LT  +F  F + L+ E + + F   D  G   L+  +F  FL++ V  D+    E++  A+ +A+  ++  IS ++F  F   L +L  M+VAM++    E +GL++++F+RA +AA  GG
Sbjct:  171 QTHLLVLRDLNVTKREFDTFLTTHGGPVSRTHAFFDLVDADGDGLISYPEYMFFTTLLSIPERQFELAFKMFDDDGNGEIDHREFKQIMELMRRRTPAGRQD--RTLDENSTPVFKNLFGDFATETLTYAKFKAFRQSLKDEVMHLHFEHYDVDGSNELSPREFGMFLISHV--DQMQLDEWV--AKVDALHKMEGSISEQEFKNFYLFLDNLDAMKVAMELIH--ETNGLNKEQFLRATRAACGGG 409          
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Match: Calcium-binding (atopy-related autoantigen-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEQ6_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.010e-31
Identity = 87/255 (34.12%), Postives = 141/255 (55.29%), Query Frame = 1
Query:  127 FNITAEAHLRVLSELGESQMRLDALMEAKGG-ISRD-SFLAMVDIDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGAHTDGFGDVADRLF--FAGNGSGKLTLEQFSMFVRLLQREALVMQFNQCDERGDGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGSGLDRQEFVRAVQAALEGGR 879
            +++  + HL VL +L  ++   D  +   GG + R  +F  +VD DGDGLISY EYM F TLLS+P+R+  +AF+MFD D +G +D  E +  M ++R  T  GR +    T+    V   LF  FA   +  L+ E+F  F + L+ E + + F   D  G   L+  +F  FL++ V  D+    +++ + +   +  L+  IS ++F  F   L +L  M+VAM++    E  GL++++F+RA +AA  GGR
Sbjct:  174 YSMDLQTHLLVLRDLNVTKREFDTFLATHGGPVPRSHAFFDLVDADGDGLISYPEYMFFTTLLSIPERQFELAFKMFDDDGNGEIDHREFKQIMDLMRRRTPAGRQDR-TLTENSTPVFKNLFGDFA---TETLSYEKFRAFHQSLKEEVMHLHFEHYDVDGSNELSPREFGMFLISHV--DQTELDKWVAKVDK--LLQLEGSISEKEFKDFYTFLDNLDAMKVAMEMIH--EKKGLNKEQFLRATRAACGGGR 418          
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Match: NAD-dependent (epimerase/dehydratase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z2E4_9STRA)

HSP 1 Score: 127 bits (319), Expect = 3.510e-29
Identity = 96/305 (31.48%), Postives = 158/305 (51.80%), Query Frame = 1
Query:   19 PTTSELEGYRKVLKAIL------EDSRVT-----PQEVKD----MLDARERFNITAEAHLRVLSELGESQMRLDALMEAKGGISRDS--FLAMVDIDGDGLISYEEYMLFRTLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGAHTDGFGDVADRLF--FAGNGSGKLTLEQFSMFVRLLQREALVMQFNQCDERGDGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLAFQEVLQHLPEMEVAMKVSGSVEGSGLDRQEFVRAVQAALEGG 876
            P   E+E Y+++++ ++      + +++T     P E+K+    M      +++  + HL VL EL  ++   D  +   GG    S  F  +VD DGDGLISY EYM F TLLS+P+R+  +AF+MF       +D  E +  M ++R  T  GR +   + +    V   LF  FA   +  L+ E+F  F + L+ E   + F   D    G L++ +FA FL++ V  D+    E++ + +   + DL   IS ++F  F + L  L  M+VAM++    E  GL++Q+F+RA +AA  GG
Sbjct:  754 PKKEEVEAYKQLVQHLMTLGDKIDAAKLTKQGPIPGEIKELEMLMTILTTSYSMDLQTHLFVLRELNVTKREFDTFLATHGGPQGRSHAFFDLVDADGDGLISYSEYMFFTTLLSIPERQFELAFKMFXXXXXXXIDHREFKQIMDLMRRRTPAGRQDRTLNENST-PVFKNLFGEFA---TETLSYEKFRNFRQNLKDEVTHLLFEHYDVDSSGELSSREFAMFLISHV--DQKQLDEWVAKVDK--LHDLDHSISEKEFKDFYKFLDSLDAMKVAMELIH--EKKGLNKQQFLRATRAACGGG 1048          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7899.16056.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.610e-18794.54protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.330e-15297.41protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.040e-5941.78protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized3.480e-3933.66protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Uncharacterized2.140e-3631.96protein n=3 Tax=Phytophthora fragariae TaxID=53985... [more]
Uncharacterized2.140e-3432.26protein n=1 Tax=Phytophthora sojae (strain P6497) ... [more]
Uncharacterized8.610e-3231.62protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
Uncharacterized2.670e-3134.41protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A06... [more]
Calcium-binding3.010e-3134.12atopy-related autoantigen-like protein n=1 Tax=Ach... [more]
NAD-dependent3.510e-2931.48epimerase/dehydratase n=1 Tax=Thraustotheca clavat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7899contigE_fasciculatus_S2_contig7899:557..6924 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score441.8
Seed ortholog evalue2.5e-121
Seed eggNOG ortholog2880.D7FPD3
Model size882
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.positive regulation of mitochondrial calcium ion concentration
EggNOG OGsKOG2643@1,KOG2643@2759
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-15_003840.1
Cds size882
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7899.16056.1prot_E_fasciculatus_S2_contig7899.16056.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7899 557..6924 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842450.053559-CDS-E_fasciculatus_S2_contig7899:556..6521696842450.053559-CDS-E_fasciculatus_S2_contig7899:556..652Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7899 557..652 -
1696842450.0665257-CDS-E_fasciculatus_S2_contig7899:1487..15531696842450.0665257-CDS-E_fasciculatus_S2_contig7899:1487..1553Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7899 1488..1553 -
1696842450.0784018-CDS-E_fasciculatus_S2_contig7899:2345..24171696842450.0784018-CDS-E_fasciculatus_S2_contig7899:2345..2417Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7899 2346..2417 -
1696842450.092008-CDS-E_fasciculatus_S2_contig7899:2998..31771696842450.092008-CDS-E_fasciculatus_S2_contig7899:2998..3177Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7899 2999..3177 -
1696842450.1028917-CDS-E_fasciculatus_S2_contig7899:3910..40521696842450.1028917-CDS-E_fasciculatus_S2_contig7899:3910..4052Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7899 3911..4052 -
1696842450.1189742-CDS-E_fasciculatus_S2_contig7899:4865..49591696842450.1189742-CDS-E_fasciculatus_S2_contig7899:4865..4959Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7899 4866..4959 -
1696842450.1315272-CDS-E_fasciculatus_S2_contig7899:5593..57011696842450.1315272-CDS-E_fasciculatus_S2_contig7899:5593..5701Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7899 5594..5701 -
1696842450.1554797-CDS-E_fasciculatus_S2_contig7899:6799..69241696842450.1554797-CDS-E_fasciculatus_S2_contig7899:6799..6924Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7899 6800..6924 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7899.16056.1

>prot_E_fasciculatus_S2_contig7899.16056.1 ID=prot_E_fasciculatus_S2_contig7899.16056.1|Name=mRNA_E_fasciculatus_S2_contig7899.16056.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=294bp
QAKNCGPTTSELEGYRKVLKAILEDSRVTPQEVKDMLDARERFNITAEAH
LRVLSELGESQMRLDALMEAKGGISRDSFLAMVDIDGDGLISYEEYMLFR
TLLSLPQRKLSIAFRMFDRDDSGAVDSHELESFMQVLRGETNVGRTEGGA
HTDGFGDVADRLFFAGNGSGKLTLEQFSMFVRLLQREALVMQFNQCDERG
DGVLTAMDFAKFLVTKVNTDRNMYKEYMRRAESEAISDLKVDISLEDFLA
FQEVLQHLPEMEVAMKVSGSVEGSGLDRQEFVRAVQAALEGGR*
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mRNA from alignment at E_fasciculatus_S2_contig7899:557..6924-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7899.16056.1 ID=mRNA_E_fasciculatus_S2_contig7899.16056.1|Name=mRNA_E_fasciculatus_S2_contig7899.16056.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6368bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7899:557..6924- (Ectocarpus fasciculatus EfasUO2)
CAGGCGAAGAACTGCGGGCCGACGACATCGGAGCTGGAGGGCTACAGAAA GGTGCTAAAGGCCATCCTGGAGGACTCGCGGGTGACGCCGCAGGAGGTCA AGGACATGCTCGACGCGAGGGAGAGGTACTTGTACGGGCTTGGCAGTTCA TATCAAGTCGTTTTCGTTTTTCTTACTTTAGCATACCGTTCTTGGGGCAA TTCAGTCTGCGAACACGGGAATCGACCATGCCACGATTTTAGACTAGTAT GCATACGGAAGATGGAGGTACTGGATAAAGAGATCGGAACGGTTTTTTCA ATATGAAGGTAACGACTCGAAACACTCATTCATTAATCTCTTCCACGGAT GAGATTCTCAGTCTTGCACCCGACACGTCGACCGTTTCGAGACTGGTTGG ATCGGTCGGCGGAGAAACGAGACCGGGCGGGGCGGGGGATCGTGACTATC ACTCCGTAATCCCCTGAATTGGAGGAATCCATGTACGCTACGCTCCTGTT CGCGTATTGTTGGAAGTCCATTGTAGCGAGTAATACTCGTGGAGCACGGT CCTGTTCCCCCGCCCCCAGCAAAGGTAACCGCTTGTGCGGAGCGTGCTAT TTCGGCACAGTTTTTCTGTGTTGTTCTCTAGTGCGCCAAACGTGAGCTAT TGATCGTTCTGAGTCAAGAGTATATACCCCACCTATGCTCTCGGTGTCCC GGAGGACGTGAAGTCTATATTTCGGTTCAGGGCACCCCTGCTTTACTTTT TTTTTTTTCTGTATTCATCGATTTGTATTCATTCCATTTGTGGGCTGCAG ACGGAAAGGATCGGCCGTGTGTGTGTGTGTGTGTATGTGTGTCTTTCTGA CCAATGAAAATACGTCAGTCTCAGTGCGGTTGAAACACACAACAATCCTA AACGCCATGAATTGGGACCCCGAGAGGGGGCGGCATGGGGGAGCCTCAGG TATTCTCCGGATTATACACAAAAAGACAGAAACGGTAGCAACAGAAGGAA GAGTGCACGTGCGTGCGTGTGTGTGGAGCTGTTCCTCTTTCGGATGGGCG GGGTGCAGGCGCGCGGAAGGAGACCCCCCAAAGACTCTTACTCGCTCGCT GCAGTCGTTCTATGTAGCGCACGAAAAATGACGACGGCACTAGCTTGAGT CGAAAAAAATCAGGAACATTATGGTCGTGTCAACAACAACAATAACAACA ACAACAACAACAACGAATCGCAGGTTCAACATCACCGCCGAGGCCCACCT GAGGGTGTTATCGGAGCTGGGGGAGTCGCAGATGCGCCTCGACGCCCTCA TGGAGGCAAAGGGCGGCATCTCCCGAGACAGGTGAAAAAAAATACAAAAG CGAAGCATATGCAGCAGTTTCGCGATCAATTATCGCATGTCCCGGTCTTT CGTTTTTCGTCAATTACTGCCTCGAACGCACGTATACGGCAGCGGGAAGG GCCCTCGGCTAAGGAAACGTCGCTGAGTAATGAGGGTCTGGGTTCTTGGC TGTTTTTGGTTTGGTCGCAACGGTCGAGCACGGGTGGGTCTGTGGTATAC GATAGTGTGACGGGATACAACGCTGATAGGGATTGGCTGTGTTTTCTAAT CAACCAAGTTTCAATCGTTTGTTTTCAAACAGAACCTGGGCCTCATATTT TCCTGGCAAGCCGCTTGAAGGCGGCGATGGTGCTAGACTCCTGCTTTTTG TGACTCATGCGGCGCTGTTAATGCTATTATAGTTCTTATTTTGCTCCGCT TAAGCTCCCCACGTGCATGCGTTTTGTTTGTGTTTATCATCTCGTTTCTC CGGAGGGTGCCCCAGATTGTACAGGCAAGCTGCGGAGTTAAAACGTACGT GTTTTGATTGAGTCCGTGTTGTGACATGACGTATGCACATGTATATTTCA CATTTCCTTGACGAGGACCCCCCTCTTTTTCCCTCTGTCCTAACCCTTTA AACGCGACCCTGCAGCTTCTTGGCGATGGTGGACATCGACGGAGACGGGT TGATCAGCTACGAGGAGTATATGCTCTTCCGTACCCTGCTGAGCTTGCCC CAACGGAAGGTGAGCCGGTTACACGCTCCTCCCGATTCTTTTTTGGTGAA GCCGATCCCCTCCACCGAGTGTTCGATGCAAAGATTGCCGAACTGCTCAT TTTCTGATTTTGCGTGCAACCTCGATTCGAATCTTGGGGGGGTCCTACTT GTAATAGATTTTCGTGACGAAATGAGTGAAGGGAGCCTTGATTCATGTGC AGAGCTCCCACCTTCGTCGATCTTTCTTCAAAGGCCGATTTGCTTCTCGA TTTGCTTCTCCGGCCGGAAAAGCGGGGATGTTTTCGGTCGTATGCATATT TTGGATTCATAGAACATGATTTTCATCGGGGGGATAGAGGGCTGACTCAA ACCCTCTTCATAGACGGCGTGGTTTCCAGGTCTGTCTGTCGATCTGCCAC CGAGCGCAAAGAGATCAATAGGGTCCACCATGTACCTCGATGGCGATACA GCCTGGCAAACGCATACATACGTACCGACGTCATCACTACAGCCCTACCC TACCTCTTGCTGTTCTCTTTTTTGAACAGCTTCCCACCCGCTCCTCTTTT CTCTGTCTGTCTGTCTGTCTCTCTCTCTCTTACTCTCTCACTCTCTCTGT AAATCACTCTCTCTGCCTCTCTCTTTCTCTCTGTGTGTGTTTTCTCTCTC GCACTCTCTATCTCTCTCCGTATCTCAATCTCCCCCTCTGCCTCTCTCTC TCTCTATATATATATATATATATCCCTCTCTCTCTCTCTCACACACACAC ACTCTCTCGTGCGCGCATGCGGTTCTTTTTTCCTTTTTTTTTCCCCGCTC TTGTTGTTGATGCTGAGAGCAGCTATCGATCGCGTTTCGCATGTTTGACC GTGACGATTCCGGCGCGGTGGACAGCCACGAGCTTGAGTCCTTCATGCAG GTGCTGCGAGGGGAGACCAACGTCGGGAGGACGGAGGGGGGCGCGCACAC TGATGGCTTTGGCGGTGAGAAGGCAGGGAGGCTGGGGGGTACTCATGAAA CGCATGTCGCAGTTGCTAGACCTCGCATACCAGCAATGCGGGGGCGGAGC GATTCGCCCGCCCAGGCTGCGTTGATCATCCTTTCGTTTGCTTTGCCTCA GACCAAATATGCCATGGGTTGATTGAGCACATGAGCACAATCCATTCCCC ACGCCTAGGTACGTCGTAGTCCGAAGTGGCTCATCGCCTACCGACCTCTC AAATGGCCCTGGTTTTTTGTCCGGGCTCTCTGCAGGAGTGCTAGACTCTC GTTTCACCAGTAAATGTTTTGACTTCAGCAACACACCTACAGCAGTACCA TGTGCCACCAGACCCTTCAAGTCATTCATGTGCACGTCTACGTTTTGTGG CATATCTATCTACCCAATACCCTTCCTCATCTTCATTGGGCCAACATAGT TCTCGATTCCCGAAACTCGCCGTCTTTGCAGACCATCTTCTTGTTGAATG TGCGCCCAATCACTCGCCGACTTTTCGCATAAATTATCCTCAAATTCATT TGCCGCGTGAGTCTGCTCTTCATCGTATTTGAACAACTGTTCTCGACACG GGCGCGACAGAACTGTTCACAACACTCGCCGCACTCACACACCCACGCCA AAGTGGTCACGGCGTTCGTTTGTAGAATACAGACATGACACACGCGACTC GCCCACTCCACCACCCACGCACAAAAAAACAAAAACAAAAAACACAGACG TCGCGGATAGGCTCTTCTTCGCTGGCAACGGGAGCGGCAAGCTTACCCTT GAGCAGTTCAGCATGTTCGTGCGGCTCCTCCAGCGGGAGGCCCTCGTGAT GCAGTTCAACCAGTGTGACGAGCGGGGGGACGGCGTGCTCACGGCGATGG ACTTCGCCAAGTTCTTGGTCACCAAGGTACTATTATTATGTTGTTGGTGT TGGTGGTGGCGGTGGTGGCGGTGGTTGCTTGCTTGCTGTGGCTGTGCACG TGGGCTGTGCTTGACTCTTTATCCAAAAAAAAATGATAATCATTACCTCG CAAGTGCTTGCTACTAATTTAAAAAGCATTAAATATCGATATTTGTTTTT ATGTGTAGCGGGATCAAGCCTCTCTTGTTGTTTGTACGTGTAGTTATTGT TTGTTTTATTCTTATTATATGAAGTTCTTTTATTTTCGTAACGGGGCGTC GGAGACAGGGGGGGGTGATACCTCGCGTGGCAAAATTGTGGAGAGATGAC GCTAGGCTGGTCCGGCGTGTTGAGCCCTTTCCCTACAACCCTTTCCCTGT GTCCCGTCGGACGTGACAGCGGGACAAATTTTGCCGAGGGAGTGTTTCAT TCTTCGTACCAGAGGAAGCATGAGCGATTGGCAGTGCAGGAGAAACGAGT AGAGTGCCACCAACCTCTCCTTCTTAGTACATTATTTCAACGCGAAAACA ATGCTATGACCAACCCATGCGTGACGTTGCTTTGCTTTCCTCTTTTTTTC TTTCCAGGTGAACACGGACCGTAACATGTACAAGGAGTACATGCGCCGGG CGGAATCGGAAGCCATCTCCGACTTGAAGGTGCGTGACCGGGGAACGGTG ACATTAACCAGGGGGACTCATGCTTTGCATGCCTTGGGGTTAGACCATTG ACCACGCGTCCTCGATAGGACGGAGTATTGTTCCCACAGGACCGATGGCC AATCGTTTCTTCCAGGACCAGAGGGAGGCGGGGGGACGATGATGGGAAAC GGGGGGCATGAAGCGGGGGCCATGTAGGAGGATGCTTCACGCGAGCTCCG AGGGGTCTAACTGCGTGGTGGTGGTGGTGGTGGTGACACTCGATGAGTCG TTGGGGGGGGGGGCTTGAAGAGAAGGGCGTTGTTTGTGGGAGAATGGTTC CGACGGCTTTAAAGGGGTGTGTCGTAGGGGGAAGAGGGAGCTTGTGGGAG GTCACTGCTGCTGTTGCTGCTGATGTGCTCTAAAGCTGCTCTTGTAGGTG GTGCGTTAGTGTGGGGGATGAATGCGGGTTGTGCGGGACAGCAGTCTGTT GGTCGTTTTGTGGGATACACGAGGCGAGGAATGGGTGGAAGCAAAACGTG GGAAGAAAAGAGCGCTTGGGAATGTGGTGGTGTACCATGGACCAATCAAC GACTTTGAATGTTGTCTGTCGTCGACAAGATGAACCCATTTTTTGTTTTT GCGTCACACAACTCGATTTTTTTTTCAAAAACATGCCGCATGCACTCTTG ACAGCAGAACGCCGGTGGCTATCAACCCTATTTAGCTGTTTTATCCGATG TGATATGCCTCCACGTGATTCCCCACTCTGACGCAACTCGCGTACGTACG CACGTTGGTGGTTTCCGTCAGGTGGATATCTCACTCGAAGACTTTCTGGC GTTTCAAGAGGTGCTGCAGCACTTGCCCGAAATGGAGGTAAGTCAATGAA AAACGCCTTCGTGGGCACTGCCTTGCTTTGGTAACTCCCGCCAACAACGC CCCACACACCTACCAAAGTCACTCGGCATTGTTCTTGCCAGAGATCGTAC GTACGCTGTCAAACATCACAGAAATATTACCCTTTCGGGTTGGCTCTCAG AAGAGGGGTGTCTTTTTGGAGTCTCTCCAATACACGGCTAGGGTCTAATA GCTACAGAGGTTGAGTCTTGTCGTTAGTTGACCCGGTTATGTAACCACGG TCTACGTTTCTCAAAAGAAGCACTCACTCGCGTAGAGCAGTGAGAGGCAG GCTCATCGTCTGTGGAGGCACCAGGCGGAACCGCGGTCGACGCGCCGGGT CGTGTTGCGCGCGGTGGTTTCCGGCGTGCTGGGGGCAGTGGGGGGGAACG GTGCGTGGGTGGGCGTGTATGTTTGAATGCAAATGGGAGAAGCTCTTCTC TTCTCATGACGCCGAGAACCAAACAAGTAGAAAACGACCGCTGCTTGGGG GGGGTTCAGCTGTGCGATACGTCTGCCTCATGACACACACACACATTCTC TTCATTGGCATCGTCAGTCGGTCAGCGCGGTCGATGCGGCTATTAAAAAC ACGCACATTTCGGGGGCCCAGGAAGGTGATATTCCACGCGGTGTGCGCGA GTAACACCAACAGGGGCTTCATCTCCTTTCCTTGCGTATTGCCAACGAGA GGGCCGGTTCGTTCTCTTGTTGTTGACCGTCGATTCGCCAGCAGTAGCGA ATGCCCTCGACGGAGCTTGCCGCAAACGTTAACACGTCGGCGTCTTTTGG ATGAAAAACGCCTTCTTGTCAGGTGGCGATGAAGGTTTCGGGGAGCGTTG AAGGGAGCGGGTTGGACCGACAGGAGTTCGTCCGCGCCGTGCAGGCTGCG CTCGAGGGGGGGAGGTAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7899:557..6924-

>mRNA_E_fasciculatus_S2_contig7899.16056.1 ID=mRNA_E_fasciculatus_S2_contig7899.16056.1|Name=mRNA_E_fasciculatus_S2_contig7899.16056.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=882bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7899:557..6924- (Ectocarpus fasciculatus EfasUO2)
CAGGCGAAGAACTGCGGGCCGACGACATCGGAGCTGGAGGGCTACAGAAA
GGTGCTAAAGGCCATCCTGGAGGACTCGCGGGTGACGCCGCAGGAGGTCA
AGGACATGCTCGACGCGAGGGAGAGGTTCAACATCACCGCCGAGGCCCAC
CTGAGGGTGTTATCGGAGCTGGGGGAGTCGCAGATGCGCCTCGACGCCCT
CATGGAGGCAAAGGGCGGCATCTCCCGAGACAGCTTCTTGGCGATGGTGG
ACATCGACGGAGACGGGTTGATCAGCTACGAGGAGTATATGCTCTTCCGT
ACCCTGCTGAGCTTGCCCCAACGGAAGCTATCGATCGCGTTTCGCATGTT
TGACCGTGACGATTCCGGCGCGGTGGACAGCCACGAGCTTGAGTCCTTCA
TGCAGGTGCTGCGAGGGGAGACCAACGTCGGGAGGACGGAGGGGGGCGCG
CACACTGATGGCTTTGGCGACGTCGCGGATAGGCTCTTCTTCGCTGGCAA
CGGGAGCGGCAAGCTTACCCTTGAGCAGTTCAGCATGTTCGTGCGGCTCC
TCCAGCGGGAGGCCCTCGTGATGCAGTTCAACCAGTGTGACGAGCGGGGG
GACGGCGTGCTCACGGCGATGGACTTCGCCAAGTTCTTGGTCACCAAGGT
GAACACGGACCGTAACATGTACAAGGAGTACATGCGCCGGGCGGAATCGG
AAGCCATCTCCGACTTGAAGGTGGATATCTCACTCGAAGACTTTCTGGCG
TTTCAAGAGGTGCTGCAGCACTTGCCCGAAATGGAGGTGGCGATGAAGGT
TTCGGGGAGCGTTGAAGGGAGCGGGTTGGACCGACAGGAGTTCGTCCGCG
CCGTGCAGGCTGCGCTCGAGGGGGGGAGGTAA
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