mRNA_E_fasciculatus_S2_contig7894.16054.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 204 bits (518), Expect = 1.600e-56 Identity = 106/151 (70.20%), Postives = 119/151 (78.81%), Query Frame = 1
Query: 4 QTRCLDAFVVALSQACEGGEKRWYSSTLELQLTSWGMCRACRSISILDVRVTNQTPSSLWCRRATQTGPNTPTSKLGVSSRVPVVRALRLTWALSTETLLRRAAIELWTWSECLWLQGSLCATSLGSADWWPRGLTQLVLEARLNISIENV 456
+TRCLDAFV+ALSQACEGGEKRWY+STLELQLTS +CRACR+ SIL V V +QTP SLW R QT PNT + L +SSRVPVVRALRLTWALS E LLR+AAIELWTWSE L L GS C +SLGS WPRGLTQLVL +I++ V
Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGTV 158
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 179 bits (453), Expect = 7.340e-52 Identity = 97/150 (64.67%), Postives = 110/150 (73.33%), Query Frame = 1
Query: 1 GQTRCLDAFVVALSQACEGGEKRWYSSTLELQLTSWGMCRACRSISILDVRVTNQTPSSLWCRRATQTGPNTPTSKLGVSSRVPVVRALRLTWALSTETLLRRAAIELWTWSECLWLQGSLCATSLGSADWWPRGLTQLVLEARLNISIE 450
G TR DAF +ALSQACEGGEKRWY+ST ELQL S +CRACRS L VRVT TP+SLW Q PNT +SK+ V SRVPVVRALRLTWA S ETL++RAAIELW+ SE L + G LCA SLGS WP GLTQLVL+ +I +E
Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVV-WPLGLTQLVLDTDFHIPME 153
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 132 bits (333), Expect = 2.480e-31 Identity = 78/146 (53.42%), Postives = 95/146 (65.07%), Query Frame = 1
Query: 4 QTRCLDAFVVALSQACEGGEKRWYSSTLELQLTSWGMCRACRSISILDVRVTNQTPSSLWCRRATQTGPNTPTSKLGVSSRVPVVRALRLTWALSTETLLRRAAIELWTWSECLWLQGSLCATSLGSADWWPRGLTQLVLEARLNI 441
Q RCLDAFVVALSQ EGGEKRWY+STL+LQL S C ACRS +L V V +TP +LW G PT+ G S+RVP V+A+ LTWA TE+ L A+ ELWT E L LQ SLC +L S WP+GL +LV++ + I
Sbjct: 6 QRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLW-----SLGQANPTA--GTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVV-WPQGLQRLVMDCTVFI 143
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 129 bits (325), Expect = 2.620e-29 Identity = 73/148 (49.32%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 1 GQTRCLDAFVVALSQACEGGEKRWYSSTLELQLTSWGMCRACRSISILDVRVTNQTPSSLWCRRATQTGPNTPTSKLGVSSRVPVVRALRLTWALSTETLLRRAAIELWTWSECLWLQGSLCATSLGSADWWPRGLTQLVLEARLNIS 444
G ++CLDAFVVAL+QAC+G EKRWY STLELQL S +C ACR + L VRV QTP SLW T N + K+ +SSRVPVV+A LTWAL L +R+A E+ + S C A SL SA WP+ L ++V E+ + ++
Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAV-WPQRLKRMVFESDMTVN 151
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.430e-26 Identity = 67/148 (45.27%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 1 GQTRCLDAFVVALSQACEGGEKRWYSSTLELQLTSWGMCRACRSISILDVRVTNQTPSSLWCRRATQTGPNTPTSKLGVSSRVPVVRALRLTWALSTETLLRRAAIELWTWSECLWLQGSLCATSLGSADWWPRGLTQLVLEARLNIS 444
G++ CL AF+VAL+Q C G EKRWY+STLELQL S C ACR + L VRV QTP SLW + + + VS+RVP V+A LTWAL E LL+ +A+EL + S+ + G+ SLGS W L +LV ++ + S
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPAS 160
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE) HSP 1 Score: 121 bits (303), Expect = 2.840e-26 Identity = 70/117 (59.83%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 109 GMCRACRSISILDVRVTNQTPSSLWCRRATQTGPNTPTSKLGVSSRVPVVRALRLTWALSTETLLRRAAIELWTWSECLWLQGSLCATSLGSADWWPRGLTQLVLEARLNISIENVS 459
G RACRS SIL R PNT S + VS R P V AL LTWAL E+LLR AAIELWTWSECL LQGSLCA SL SA+WWPR LTQLVL+A L+I ENVS
Sbjct: 1083 GGARACRSTSILHTR------------------PNTSKSAVPVSGRAPAVWALHLTWALPMESLLRTAAIELWTWSECLELQGSLCAASLRSANWWPRRLTQLVLKADLDILTENVS 1181
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 109 bits (273), Expect = 2.070e-24 Identity = 64/140 (45.71%), Postives = 84/140 (60.00%), Query Frame = 1
Query: 16 LDAFVVALSQACEGGEKRWYSSTLELQLTSWGMCRACRSISILDVRVTNQTPSSLWCRRATQTGPNTPTSKLGVSSRVPVVRALRLTWALSTETLLRRAAIELWTWSECLWLQGSLCATSLGSADWWPRGLTQLVLEARL 435
LD +VAL+QAC+G EKRWY STLELQL S +C ACRS +L V V TP +LW R ++T P+ + ++ S+RVP V+AL TWAL + L +RAA E +E G A S+ S WP L +LV R+
Sbjct: 90 LDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVV-WPESLKRLVFSRRM 228
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.630e-21 Identity = 53/86 (61.63%), Postives = 60/86 (69.77%), Query Frame = 1
Query: 1 GQTRCLDAFVVALSQACEGGEKRWYSSTLELQLTSWGMCRACRSISILDVRVTNQTPSSLWCRRATQTGPNTPTSKLGVSSRVPVV 258
G T+C DAFVVALSQACEGG KR Y+STLEL L S +CRA RS S L VRV QTP S W Q P+ +SK+ +SSRVPVV
Sbjct: 18 GPTQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEGSSKIRLSSRVPVV 103
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 105 bits (263), Expect = 2.490e-21 Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 1 GQTRCLDAFVVALSQACEGGEKRWYSSTLELQLTSWGMCRACRSISILDVRVTNQTPSSLWCRRATQTGPNTPTSKLGVSSRVPVVRALRLTWALSTETLLRRAAIELWTWSECLWLQGSLCATSLGSADWWPRGLTQLVLEARLNIS 444
G++ CLDAF+VAL QA +G KRWY STLELQL S C ACRS DV++ QTP SLW R + + + + SRVP V+A WAL E LL R+A EL SE G ATS G W+ + LT+L+ + +++
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQK-LTRLMFYSERSVN 171
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 5.840e-17 Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 4 QTRCLDAFVVALSQACEGGEKRWYSSTLELQLTSWGMCRACRSISILDVRVTNQTPSSLWCRRAT 198
+++CLDAFVVAL+Q C+G EKRWY+STLELQL S C ACR + L VRV +TP SLW R T
Sbjct: 38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTT 102 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7894.16054.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7894.16054.1 >prot_E_fasciculatus_S2_contig7894.16054.1 ID=prot_E_fasciculatus_S2_contig7894.16054.1|Name=mRNA_E_fasciculatus_S2_contig7894.16054.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=368bp GQTRCLDAFVVALSQACEGGEKRWYSSTLELQLTSWGMCRACRSISILDVback to top mRNA from alignment at E_fasciculatus_S2_contig7894:2050..3153- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7894.16054.1 ID=mRNA_E_fasciculatus_S2_contig7894.16054.1|Name=mRNA_E_fasciculatus_S2_contig7894.16054.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1104bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7894:2050..3153- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7894:2050..3153- >mRNA_E_fasciculatus_S2_contig7894.16054.1 ID=mRNA_E_fasciculatus_S2_contig7894.16054.1|Name=mRNA_E_fasciculatus_S2_contig7894.16054.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1104bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7894:2050..3153- (Ectocarpus fasciculatus EfasUO2)back to top |