mRNA_E_fasciculatus_S2_contig7875.16038.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7875.16038.1
Unique NamemRNA_E_fasciculatus_S2_contig7875.16038.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Match: ATP-binding (cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 MET type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDT3_ECTSI)

HSP 1 Score: 724 bits (1869), Expect = 4.020e-249
Identity = 397/454 (87.44%), Postives = 411/454 (90.53%), Query Frame = 2 
Query:  104 MPPRWMRTSDVSLFEAIRSYTDVSASSFLVCVACLIGVADVGCAVALYGVVHSWAPRSWGPLVMLQHMWGDQNFSKDTADILLLVVARLSVLPLIAFLAATKGKPPNAAPASTASGADNASGGNSSRAGRGQTNQVAGKKKSLWHRVCGCFGYGESAPTEGRGTASGRRQAPSSDLNSLEGGESLHLPLLSSTHGGGAGRSDDV---GYDNGNXXXXLSINGGASEEKSVAVGEGDTPTKTEIIETEGARREREXXXXXXVAXXXXXXXXXAKTLAERKKSGFLVVMYAVSTAMQVYTGVKCDRFHFTKEVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLYPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARIYL 1456
            MPPR MRT+DVSLFEAIRSYTDVSASSFLVCVACLIGVADVGCAVALYGVVHSWAPRSWGPLVMLQH+WGDQNFSKDTADILLLVVARLSVLPLIAFLAATKGKPPN APASTASGA NAS GNSSRAGRG+TNQV GKKKSLW RVCGCFGYGESA + GRG  SGRRQAPSSDLNSLEGGESLH PLLSSTHG GAGRSD+V   GY+NG     LSINGGASEEKSVA GEGD  TKTEI ET+GARRERE XXXXX  XXXXXXXX    LAERKKS FLVVM+A+STAMQVYTGVKC RF FTKEVPEGVLMGIGVLWLNAMV AL QLVADATMEEGLL PSLHPHRL+PGS AGHRCD CQQRIKSQDAK WRCKLCDFDLCRSCYEKKDRRGAEGALRGDKG+RDE +L TLTYFKRALRLAGPHWPFF+VAFACLAIS+TARI L
Sbjct:    1 MPPRRMRTADVSLFEAIRSYTDVSASSFLVCVACLIGVADVGCAVALYGVVHSWAPRSWGPLVMLQHVWGDQNFSKDTADILLLVVARLSVLPLIAFLAATKGKPPNTAPASTASGAGNASDGNSSRAGRGRTNQVVGKKKSLWRRVCGCFGYGESATSAGRGGTSGRRQAPSSDLNSLEGGESLHQPLLSSTHGRGAGRSDEVNSSGYENGGG---LSINGGASEEKSVAAGEGDKVTKTEI-ETDGARREREKXXXXXXXXXXXXXXX---ALAERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKEVPEGVLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRLFPGSMAGHRCDICQQRIKSQDAKGWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGLRDEKNLSTLTYFKRALRLAGPHWPFFMVAFACLAISNTARIAL 447
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BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LVH6_9CRYP)

HSP 1 Score: 154 bits (390), Expect = 4.350e-37
Identity = 79/182 (43.41%), Postives = 114/182 (62.64%), Query Frame = 2 
Query:  920 AERKKSGFLVVMYAVSTAMQVYTGVKCDRFHFTKEVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGL---LAPSLHPHRL-YPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARIY 1453
            A  ++S F   ++ VSTA QV+ GVKC  F F  E+ +G+LMG GVLW+NAM  +L +LV      +G+     P LHPH L        H CD C  R+   D +A+RCKLCDFDLC  C+ +KD+R AEG LRGDKG++  +++ TL+YF+RA+ LA   W  F ++   L +++ A+++
Sbjct:  176 ARHRQSFFTGALFVVSTAAQVFIGVKCIGFKFPVELEQGLLMGSGVLWINAMTWSLRELVKSHRQADGIGYVRVPELHPHSLCLDPRVHNHYCDVCGLRMS--DGRAYRCKLCDFDLCVRCFSRKDQRTAEGVLRGDKGIKLTSNVSTLSYFRRAVALARREWLLFFLSMTMLLLNNAAQLW 355
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BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Match: Hypothetical (protein (Fragment) n=5 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DV78_HEMAN)

HSP 1 Score: 149 bits (377), Expect = 2.110e-34
Identity = 81/176 (46.02%), Postives = 108/176 (61.36%), Query Frame = 2 
Query:  935 SGFLVVMYAVSTAMQVYTGVKCDRFHFTKEVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGL---LAPSLHPHRL-YPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARI 1450
            SGFL   + +S+A Q++ G+KC  F F  E  +G LMG+GVLW+N MV + +++V      EGL     P LHPH L        H CD+C  RI   + KA+RCKLCDFDLC  C+ +KD R +EG LRGDKGVR E+ L T+ YFKRAL LA   W  F++A   L  ++  ++
Sbjct:  137 SGFL---HFISSAAQLFVGLKCIGFKFPDEAMQGTLMGLGVLWINIMVWSTSEVVKAHNKAEGLGQAKIPELHPHTLTLHRKVHNHWCDKCSTRI--DNGKAYRCKLCDFDLCMRCFTRKDLRTSEGLLRGDKGVRREDPLTTMDYFKRALGLAKREWALFLLALLSLTSNNLLQL 307
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U4T8_HEMAN)

HSP 1 Score: 142 bits (357), Expect = 8.320e-32
Identity = 73/171 (42.69%), Postives = 104/171 (60.82%), Query Frame = 2 
Query:  950 VMYAVSTAMQVYTGVKCDRFHFTKEVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGL---LAPSLHPHRL-YPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARI 1450
            +M   S+A Q++ G+KC  F F  E  +G+LMG+GV+W+N MV + +++V      EGL     P LHPH L    +   H C +C  RI     KA+RCKLCDFD+C  C+ +KD R +EG LRGDKG+R E+ L T+ YF+RAL LA   W  F++A   L+ +   ++
Sbjct:    8 IMLFASSAAQLFVGLKCIGFQFPDEAVQGLLMGLGVVWINIMVWSTSEVVKAHNKSEGLGKAKIPELHPHTLTLHRNVHAHWCGKCFTRIDC--GKAYRCKLCDFDVCMRCFTRKDLRTSEGLLRGDKGIRREDPLSTIDYFRRALGLARGEWALFLLALVSLSCNSALQL 176
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YQB2_9CRYP)

HSP 1 Score: 142 bits (358), Expect = 9.190e-32
Identity = 74/171 (43.27%), Postives = 104/171 (60.82%), Query Frame = 2 
Query:  950 VMYAVSTAMQVYTGVKCDRFHFTKEVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGL---LAPSLHPHRL-YPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARI 1450
            +M   S+A Q++ G+KC  F F  E  +G+LMG+GV+W+N MV + +++V      EGL     P LHPH L    +   H C +C  RI     KA+RCKLCDFD+C  C+ +KD R +EG LRGDKG+R E+ L T+ YFKRAL LA   W   ++A A L+ +   ++
Sbjct:  210 IMLFASSAAQLFVGLKCIGFQFPDEAVQGLLMGLGVVWINIMVWSTSEVVKAHNKSEGLGKAKIPELHPHTLTLHRNVHNHWCGKCFTRIDC--GKAYRCKLCDFDVCMRCFTRKDLRTSEGLLRGDKGIRREDPLSTIDYFKRALGLARGEWALLLLALASLSCNSALQL 378
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BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Match: ABC (transmembrane type-1 domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C256_EMIHU)

HSP 1 Score: 137 bits (344), Expect = 3.830e-30
Identity = 77/189 (40.74%), Postives = 100/189 (52.91%), Query Frame = 2 
Query:  911 KTLAERKKSGFLVVMYAVSTAMQVYTGVKCDRFHFTKE------VPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLY-PGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARIYL 1456
            K  AE +K   +  ++ VSTA QVY GVKC  F    E        +GVL G+ VL +N     L +LV   T E G   P  H H LY   S   H+CD C+ +      + +RC LCD+D C +C+ KKDR   EG LRGDKGV+    L T  YF+R L+LA P  P F VA  C+  +   R++L
Sbjct:  397 KEAAEVRKGLLVAAIFGVSTAAQVYVGVKCISFRGEWERDAHVLTAQGVLFGVAVLLINVESWLLKRLVHALTAEVGFFVPEFHSHPLYFHPSVPNHKCDLCRNKT----GQVYRCPLCDWDACPACFNKKDRSTGEGVLRGDKGVKSGGALTTSQYFRRGLKLALPQLPLFGVALLCVVTTSALRLFL 581
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Match: Hypothetical (protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TF98_EMIHU)

HSP 1 Score: 135 bits (340), Expect = 1.600e-29
Identity = 76/189 (40.21%), Postives = 99/189 (52.38%), Query Frame = 2 
Query:  911 KTLAERKKSGFLVVMYAVSTAMQVYTGVKCDRFHFTKE------VPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLY-PGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARIYL 1456
            K  AE +K   +  ++ VSTA QVY GVKC  F    E        +GV  G+ VL +N     L +LV   T E G   P  H H LY   S   H+CD C+ +      + +RC LCD+D C +C+ KKDR   EG LRGDKGV+    L T  YF+R L+LA P  P F VA  C+  +   R++L
Sbjct:  172 KEAAEVRKGLLVAAIFGVSTAAQVYVGVKCISFRGEWERDAHVLTAQGVFFGVAVLLINVESWLLKRLVHALTAEVGFFVPEFHSHPLYFHPSVPNHKCDLCRNKT----GQVYRCPLCDWDACPACFNKKDRSTGEGVLRGDKGVKSGGALTTSQYFRRGLKLALPQLPLFGVALLCVVTTSALRLFL 356
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Match: Uncharacterized (protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3K8_DIALT)

HSP 1 Score: 124 bits (312), Expect = 4.930e-26
Identity = 66/186 (35.48%), Postives = 101/186 (54.30%), Query Frame = 2 
Query:  908 AKTLAERKKSGFLVVMYAVSTAMQVYTGVKCDRFHFT--KEVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLYPGST-AGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARIYL 1456
            AK  A  ++ G +  ++ VSTA Q++ G+K  +F F   +E  +G L+GI VL  N     + + V +AT E+G + P  HPH LY  +  A H CD C +R        + C+ C FD+C  C+ +KD+R +EG LR D+G ++  +  T  Y  R   L   H P F+VA  CL  +  A+++L
Sbjct:  196 AKNRANARRQGMVGAVFLVSTAFQMFVGIKTIQFDFVAAREREDGALLGILVLLTNVSTWFVVRAVREATKEDGFVVPEFHPHALYHRTNLALHHCDLCSER----GTTFFSCRQCGFDVCPRCFARKDKRTSEGLLRNDRGFQEPAEFTTWQYVTRTASLVRGHVPLFLVAIGCLVATTLAQLFL 377
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JGA5_9EUKA)

HSP 1 Score: 120 bits (301), Expect = 3.120e-25
Identity = 66/176 (37.50%), Postives = 99/176 (56.25%), Query Frame = 2 
Query:  953 MYAVSTAMQVYTGVKCDRFHF------TKEVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLY--PGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARIYL 1456
            M+ V++A QVY G+KC  F        T ++ + VL    +  +N       +LV   T EEG   P  HPHRLY  P  T  HRCD C+ RI     +++ CK+C++D C +C+ KKD+   EG +RGDKGV+D  +L    Y  + LRL  P  P F++A + LA++ + R+++
Sbjct:    1 MFVVASAAQVYVGIKCISFDCEWQQRPTLKLVQTVLFLSTLALVNLESFLSKRLVMVCTKEEGFFIPEFHPHRLYFQPNLT-NHRCDMCRNRI----TESYICKMCNWDCCAACFNKKDKATGEGIIRGDKGVKDVRNLSFGRYLAKGLRLIAPELPLFLLALSLLAVNSSIRLFM 171
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Match: ABCB1 (protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812TFL8_9DINO)

HSP 1 Score: 119 bits (299), Expect = 3.190e-25
Identity = 64/182 (35.16%), Postives = 100/182 (54.95%), Query Frame = 2 
Query:  920 AERKKSGFLVVMYAVSTAMQVYTGVKCDRFHFTKE--VPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLY-PGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVR-DENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARIY 1453
            A+R+K   ++V++A+ST M  Y G+KC  +H+       +G L  + ++ +N     L  L+   T E+G L P +H H L+       H CD C  ++K     A+RC+ CDFDLC  CY++KD+  A+G   G + VR D   + T TYFKR ++L+   WP  V A  CL ++   +I+
Sbjct:  146 ADRRKEIIMLVLFAISTGMSFYNGIKCIVYHYDPRFLALQGTLQALTMVMINVEYFMLKNLLNKFTEEQGELIPHIHMHPLFFETGLKCHGCDVCGDQMKGPHYIAYRCRTCDFDLCPRCYKQKDKHSAKGF--GARSVRRDGEQITTWTYFKRIVQLSMEFWPTLVAAVTCLVVTQGLQIF 325
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7875.16038.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
ATP-binding4.020e-24987.44cassette transporter, subfamily B, member 4, group... [more]
Hypothetical4.350e-3743.41protein (Fragment) n=1 Tax=Cryptomonas curvata Tax... [more]
Hypothetical2.110e-3446.02protein (Fragment) n=5 Tax=Hemiselmis andersenii T... [more]
Hypothetical8.320e-3242.69protein (Fragment) n=1 Tax=Hemiselmis andersenii T... [more]
Hypothetical9.190e-3243.27protein n=1 Tax=Hemiselmis tepida TaxID=464990 Rep... [more]
ABC3.830e-3040.74transmembrane type-1 domain-containing protein (Fr... [more]
Hypothetical1.600e-2940.21protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID... [more]
Uncharacterized4.930e-2635.48protein n=2 Tax=Diacronema lutheri TaxID=2081491 R... [more]
Hypothetical3.120e-2537.50protein (Fragment) n=1 Tax=Haptolina brevifila Tax... [more]
ABCB13.190e-2535.16protein n=1 Tax=Symbiodinium necroappetens TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7875contigE_fasciculatus_S2_contig7875:48..6164 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score733.4
Seed ortholog evalue7.4e-209
Seed eggNOG ortholog2880.D8LDT3
Model size1823
KEGG koko:K05657
KEGG TC3.A.1.201
KEGG Pathwayko02010,map02010
Hectar predicted targeting categorysignal anchor
Exons7
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1132@1,KOG0058@2759
Ec32 ortholog descriptionATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 MET type
Ec32 orthologEc-08_003250.1
Cds size1572
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7875.16038.1prot_E_fasciculatus_S2_contig7875.16038.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7875 196..5092 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842448.1560924-UTR-E_fasciculatus_S2_contig7875:47..1951696842448.1560924-UTR-E_fasciculatus_S2_contig7875:47..195Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7875 48..195 -
1696842448.2354934-UTR-E_fasciculatus_S2_contig7875:5092..51281696842448.2354934-UTR-E_fasciculatus_S2_contig7875:5092..5128Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7875 5093..5128 -
1696842448.2484913-UTR-E_fasciculatus_S2_contig7875:6097..61641696842448.2484913-UTR-E_fasciculatus_S2_contig7875:6097..6164Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7875 6098..6164 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842448.168397-CDS-E_fasciculatus_S2_contig7875:195..5881696842448.168397-CDS-E_fasciculatus_S2_contig7875:195..588Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7875 196..588 -
1696842448.1787066-CDS-E_fasciculatus_S2_contig7875:1206..13361696842448.1787066-CDS-E_fasciculatus_S2_contig7875:1206..1336Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7875 1207..1336 -
1696842448.1901305-CDS-E_fasciculatus_S2_contig7875:2740..29131696842448.1901305-CDS-E_fasciculatus_S2_contig7875:2740..2913Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7875 2741..2913 -
1696842448.201616-CDS-E_fasciculatus_S2_contig7875:3224..36391696842448.201616-CDS-E_fasciculatus_S2_contig7875:3224..3639Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7875 3225..3639 -
1696842448.212027-CDS-E_fasciculatus_S2_contig7875:4074..43191696842448.212027-CDS-E_fasciculatus_S2_contig7875:4074..4319Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7875 4075..4319 -
1696842448.2240546-CDS-E_fasciculatus_S2_contig7875:4876..50921696842448.2240546-CDS-E_fasciculatus_S2_contig7875:4876..5092Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7875 4877..5092 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7875.16038.1

>prot_E_fasciculatus_S2_contig7875.16038.1 ID=prot_E_fasciculatus_S2_contig7875.16038.1|Name=mRNA_E_fasciculatus_S2_contig7875.16038.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=524bp
MPPRWMRTSDVSLFEAIRSYTDVSASSFLVCVACLIGVADVGCAVALYGV
VHSWAPRSWGPLVMLQHMWGDQNFSKDTADILLLVVARLSVLPLIAFLAA
TKGKPPNAAPASTASGADNASGGNSSRAGRGQTNQVAGKKKSLWHRVCGC
FGYGESAPTEGRGTASGRRQAPSSDLNSLEGGESLHLPLLSSTHGGGAGR
SDDVGYDNGNGGGGLSINGGASEEKSVAVGEGDTPTKTEIIETEGARRER
EKEEAEQVAAVAAEAAEAAKTLAERKKSGFLVVMYAVSTAMQVYTGVKCD
RFHFTKEVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHR
LYPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEG
ALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISDTARIY
LALTISIVTTCCVAVQYLTLVARGGRLEVAVHGMRSAYVRCWGGVDHTVY
CGPGQLAPRLRRVGTASPSIGNC*
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mRNA from alignment at E_fasciculatus_S2_contig7875:48..6164-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7875.16038.1 ID=mRNA_E_fasciculatus_S2_contig7875.16038.1|Name=mRNA_E_fasciculatus_S2_contig7875.16038.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6117bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7875:48..6164- (Ectocarpus fasciculatus EfasUO2)
AGCACAGCGAGGGAGCACCAACACCACCGAGGTGTTCTGGTGATACGAGC
GTTGCCTTCTCTCAGAGGTGAGATCTGGTTTATTATCTGTGAGGGATTGC
TTGGAGACATTGCCAAAGCAGCGGGCAGCGCACCGCGCGGTACTCGGAAC
GGTCCGGACAGTCCTGCCAAATCTTAATGCCCCGCCTGTGATCAGCTCGC
ATGCAGCAGCAGCAGAGGTTTTTTGGAGGTTTGGTCCGATCACTGCTCAA
GCCCAGCGCCTCGCCCTGTTCCCGCGCCCCTGCAGCCTCTCGGTCGTTCA
CTGGCGTTGCATCTCGCAATATTAAGTCCAGCGTGTGAGTAATCAACGCG
TTTCTGTATAGTGTGCCACTCGTTCCATCTCACGGCGTTCTGCAGAACGT
GCAGTGCGGAACACGCGAGAAGGGTGAGAGACGCTAGACTACGTTGTCCC
TATGCCATGCCAACACCATGACTTTGAGTCCACTCCAAATTGCGCTGCAT
GTTTTGCTCTCGATGACGAGCGAAGGAGCTCGTACTTCGAACCTTTGCAT
TCTTTGAAGGTGCGCGACATCACTTCGCGTGAATCTTGCCCGACACGCCC
ATCAAGAGCAACATTCGGATGCTCGACTGCTGTGACATGCCCAACATTGC
AGCTCTGGAGCACGCCGATCGCCCCGCAACCCGATGCTAGCAAAGTTGGT
TCGGACATTCAAGCCGTCACCTGATTGCCTAGACACACCGCCTCCTGTAA
TCGAGTTCCCACCCGGTACATACACAAGCGGCAGTTCCCGTCCCCGTGCC
AGCACCCGCCCGCCAACCGCCCCCTTCCCCGCCCTTCCGTTGACTTCACA
AGCGCCCCGTACACCAGGCCAATCACCTGAGAGGGCGCACACGCGGAAGA
GGTAAGTGCGTTCGCCTCTCAAACGGGTGGGTGATGCTTCTCCAGGCGTC
CCACTCCCTCCCCGTCAGTCACACAGCTCTCCTCTCAACGGATGTTTCTC
CGCCCCCCCCCCCCCCCCCCCTTGTCTGCCCCTCAGCCAGCCCAGCAGAG
AAGAGGAGCCCCCTCACAAAACATGCCGCCTCGATGGATGCGCACCTCGG
ACGTCTCGCTCTTCGAAGCGATCCGCTCCTACACGGACGTTTCCGCGTCG
TCGTTCCTGGTGTGCGTGGCCTGCCTCATCGGCGTCGCGGACGTGGGCTG
CGCCGTGGCCCTCTACGGGGTGGTCCATTCGTGGGCCCCCCGGTCGTGGG
GGCCGCTGGTCATGTTGCAGCACATGTGGGGAGATCAGGTCTGTTGTCGC
CTTCGTATATCAAGCGTGTCTTCATTTTTTTTTTTGGCGTGTTTGTGGCC
GTACATAGGCCGAGACCCCTCGTTGTCGGTGCGTTGGGGTTTTCTAGTCC
TTGCAGCTCTCCCGGAGAAGGAGGATACGGCACACCATTCGAGCATCCAT
ATCTATCTTTCGTGTTTGGTGCCAGCGATTTTTTTTGGCATCTGTCCCTG
TCTTTCGACAACCAAAGTCCGGTATCTGCTCCGTGTTTGGTTTCCATGAG
TGCTTGAGCATCGCGCAGCGGCAGGGGCGGATACATGGAGCTTGGAGCTC
TGGTTTCGGGAACTCTGCTTTGGGTCTAGGCAGTGTGCTTCACCTTCGTA
TTTTGTCGTCGCGACAACTCGCTGAGCTCACAGCACACGTTTGCCTGTCT
TCCACAAGGACACACCTCCGTGCCTGCGCACCTTCACGCCCCCCTTCCGT
CTCAGCGAAACATACCCAAACCTTCGTTTTTCCTTTCCGCCCGCTCTCGT
TGCCATCCCCCACCACCCTCTCTCCGATCGCCAAAACGCCCGCAGAACTT
CTCCAAGGACACGGCCGATATCCTGCTGCTTGTGGTCGCGCGGCTGTCAG
TGCTGCCGCTGATCGCTTTTTTGGCGGCCACGAAAGGAAAACCGCCAAAC
GCGGCCCCCGCATCGACGGCGAGTGGTGCCGATAACGCCTCTGGTGGCAA
CTCCTCCCGTGCCGGACGTGGGCAGACAAACCAAGTGGCCGGGAAGAAGA
AATCTCTCTGGCACCGCGTCTGTGGCTGTTTTGGTTACGGGTAAGTGTTT
TTTTTTTGTCAGGGGGGGCGGACTCATAGCACCAGGAAACAGTCAAGAAG
AGCCGAGATCACTCGTCAACCGGCTTCCTTCCCACCATTCACGTTGTCGC
TTATCTGATGCCTCGTTTCAAAGCCGCGGTCGGCCCACAGTATCCGGTCG
TGAGCTTTTCGTTGCCATGATGGCTCGCAGGTACTCCCCCGCCCCTTCTT
TGGTAGGGTGTTTAGCCCCTTTTGCGTCTAGCACCCGATGTGCGATGCGA
AGGAAGCGAAACGAAACCTGCAGCAGTACCCGCCCTCCCCGCCTTAACTG
AGTCTCCTTTCCCACGAGTTCTTGAGCGCGCGTGTAGAGCCTTGGGCGAA
CGGTCACAAGCAAGTCCCCCCTCCAATGGGTCCACCCCATTCCGATACCC
CCCAAAACCCGCGTTACCACGACAGCGAGTCAGCCCCAACAGAAGGAAGA
GGAACCGCAAGCGGCCGGCGTCAAGCCCCGTCGTCGGACCTGAACTCTCT
GGAGGGGGGGGAGTCCCTGCACCTACCCTTGTTGTCGAGCACCCATGGCG
GGGGCGCGGGCAGGAGCGACGACGTCGGCTACGACAACGGCAACGGCGGT
GGCGGCTTGTCCATCAACGGAGGCGCGTCGGAGGAAAAATCGGTCGCGGT
CGGGGAGGGGGACACGCCGACGAAGACGGAGATCATCGAGACAGAGGGGG
CGCGGAGGGAGCGTGAGAAGGAGGAGGCGGAACAAGTGGCGGCGGTGGCG
GCCGAGGCGGCCGAGGCGGCCAAGACTCTTGCCGAGAGGAAGAAGAGCGG
GTTCCTGGTCGTCATGTATGCCGTGAGCACGGCCATGCAGGTGGGTCGTT
CGGTCATACTGTAGCGATCGCTTTTTGTAGGTAGGAAACCGGCGGGTGTT
TGGGGGTGTGTGCCTGTTGCTTGTGGCGCGCTTGTCTGTCGGAGGCAGTC
TCGGAAACGTGGGCCGTTCCCGTGGCTTTGATACAGGTCACTGCCAAAGC
AAATGGGTGATCGTTCGGTCCGGTATAAGCAAGCGTTCCGACTGCATTTT
CTCACGTTCGTTTTTCGTACACCTGTTTCAACGGTTTAAATCTACTGCAC
CCCGCCCCGCCCCCCGACTCGTCCCTCCGCCTTCTCTTGTCCCGCGCCCA
GGTGTACACCGGCGTGAAATGCGATCGGTTCCACTTCACCAAGGAGGTCC
CCGAGGGAGTTCTCATGGGAATCGGCGTTCTGTGGCTGAACGCGATGGTG
GGGGCCCTCACCCAGCTCGTCGCCGACGCGACCATGGAGGAGGGTCTTCT
TGCACCCTCTCTTCACCCTCACAGGTGATGAAGCCAACATCTACCCGCGT
TTTCGTTATTTTTCTTAATTTTCACTATAAATATTTTCATAGATGAGTGA
GTTCATAGCGTCAGCGGAGCGAGCACTCTACCTGTGTTTCTTCGATTCCC
CAAGCAGCATACCACCAATACGCTTTGGAAGCACGCATTGGTTTGGCTAG
GCTTGAATCTACGGCGTAGCTTCGGTCGCTTCGCATCAGTTGTGCCGAGA
AGCTCCGTTCCTGCGGCAGTTGGATGCGACAACTCATCGGGGACAACAGT
CGCCATGGAGGACGTAAAAGGCGGAAGAACGGTGTTCCCCAGACGTTTTT
GTCCCGATCACCCCCACAGCCGCCAATCGAGCGGAGCTGAACTGGTCTAT
TTGAGATGATGGTGTAACTTGTTGCACACACATCCACGCGCCCTCCTGGG
CTGGGGGAATGCCTCGAGTTCGAGGCTTGTTAATTTTCGGCCGGCCGTAC
GCCCCCTCGAATATCCTGCTCCAGTCACCATGCTCTCTCCTTTCTCCACC
CGCACAGACATCTGCCAGCTAGCCGCTGGGACCGACTGTATCGAGAAATC
ATTCACAGGGTACTACCACAGAATGTGTGCGTGTCATCGAACCAATTTTC
TCTTATCTCTTATCTCTTCTCTCCTTGTTTGTGTCTCTGGTGGATCAAGC
AAGGTGGGCATGGATAGACAGCCGTACGTAGTAGTACGTAGACTATGCTT
CTTCCCTGAAGTCTCTCTCGTGAAAACTCGACGAGCCACGAAACCTCTTC
TTCTCTCTTCGAGCAGCCAGCGCAAGGAGGAGAGTGATGTGGGCGTGAGG
CAGCAGGGTGTGTTCATTTTTCGCCAAGCTTGGGCTGTCTATATCAATCG
GTTGAAGACCGGAAAGATTATTTGCTATCCCACCCCAAAGCAAGATTGAA
CGCGGAGATCTATCGGACGGTCGGAGGATCCATCTCTCTCTATTATCCCC
GTGGCTCATCCTGTAGTCAGCCAGGATGAGGAGGTAGGTCATCATCCGAA
GACGCGATTTTGCCAAGATCTCCCAGGGTACTGTCCTCGAATCCGCCGTG
GATGACGTCACCCGTCGTCCAAGGATCTTCCATCGTGCCCTATTTTTTGC
CGTTTTACAAATTCCGCCGCAGGGGGCGTTGACCAATCAGCGAATTGCGT
GCCACAAATGTTCTTCTTTCTGTTGTCGATGGGACCGCAGCACGGAGGCA
GCCCAGGTTCACAGTGATTCACCCCGAGCTACCCTTAGGTTGACAAGGAC
CTCTCCGTTCTCACTTCGCGCCCCGTTGGCGACTGCTTCTTTCCCTTCGT
TCGTTTTGTTCCTCTTTCGCTCCTTCGCACGCACTAAATCCTGCACGGAT
CATATAACGATGACGGCGAATTCCGCAGATTGTACCCGGGGTCGACGGCT
GGACATCGGTGCGACCAATGTCAGCAGAGAATCAAGAGCCAAGACGCCAA
GGCGTGGAGGTGCAAGCTCTGCGACTTCGACCTCTGCCGTTCCTGCTACG
AGAAGAAGGTGTGTGCATATTCTGACAAAATTTGTTTAAGTTCGTTTTCG
TTTTGAGGTTGCTGGGGCGTTAGTACAACCAGCCTCTGCTCAATACATCA
CTCTGAACCATCTACACGCACTTGACTAAAAAAACAATGGTCAGGAGAGT
GTGTCCTCAATTTTTTTCCACACATGTCGAGCAATTCACTGCAGCGAGGT
GTCGACATGCGTACTGAGGTGTTCTCCCATGGAGGAAGAGTATTTGCCGA
CACATGAAGAAAGGGAGGGCTTTGTAGTCTCTGGCCGAGAGGAACTTTTG
TTTTGAAGGGGAAGTCCTACAAGTGTTGATTGAACCTCCATGAACGCTTC
GATTCCGGCTGGCATCACCCAATCTTCGGTGTTAAGCACTTCAACAGGTC
TACATAAGTTCAGTATGCAGCGGGTTTCACGCAGTCCTCGGAGATGAGAG
TTACCCGTTCCTTCTGTGATGTCTCAAGATGACGTTGTTTTCTGCAAGCG
GTGTACGTGTTGGTGTGTGTTTTCGTGTGTGATTTTCGGTGTCCTCCCAA
CCACCCCAACACCCTCTTCTGACCACACCCCCGGGGGCATCGTTGTCAAC
GTCGTCCTCCTCCTTCCTCTCCTCAGGACCGCCGCGGAGCAGAAGGCGCG
CTGAGGGGGGACAAGGGGGTGCGGGACGAGAACGACCTGCCGACGCTGAC
CTACTTCAAGAGGGCGCTCCGCCTCGCCGGCCCGCACTGGCCCTTCTTCG
TGGTGGCGTTCGCGTGCCTGGCCATCTCCGACACCGCCAGGATATACCTC
GCCCTCACAATTTCAATCGTCACCACTTGCTGCGTCGCTGTACAATACTT
GACGCTAGTCGCACGTGGGGGAAGACTCGAAGTCGCTGTGCATGGGATGC
GCTCTGCGTACGTACGTTGTTGGGGGGGGGTCGACCATACTGTGTACTGT
GGGCCGGGACAGCTAGCCCCGCGGCTGCGCCGTGTCGGGACTGCCTCCCC
CAGTATTGGAAATTGTTGAAAGCAAGCCGACGAATATCGTCGGCGTTGCT
AGTCCCAAGCTGGCTTTTATTTTTTGCACTCTGTTTCAGGCTTGAGAACA
GAAGCGGGGACAGACTCCTCATGTTCGCATGCAGTGGCATTTCGATGATC
GCGAAAAATGCAAACAC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7875:48..6164-

>mRNA_E_fasciculatus_S2_contig7875.16038.1 ID=mRNA_E_fasciculatus_S2_contig7875.16038.1|Name=mRNA_E_fasciculatus_S2_contig7875.16038.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1572bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7875:48..6164- (Ectocarpus fasciculatus EfasUO2)
ATGCCGCCTCGATGGATGCGCACCTCGGACGTCTCGCTCTTCGAAGCGAT
CCGCTCCTACACGGACGTTTCCGCGTCGTCGTTCCTGGTGTGCGTGGCCT
GCCTCATCGGCGTCGCGGACGTGGGCTGCGCCGTGGCCCTCTACGGGGTG
GTCCATTCGTGGGCCCCCCGGTCGTGGGGGCCGCTGGTCATGTTGCAGCA
CATGTGGGGAGATCAGAACTTCTCCAAGGACACGGCCGATATCCTGCTGC
TTGTGGTCGCGCGGCTGTCAGTGCTGCCGCTGATCGCTTTTTTGGCGGCC
ACGAAAGGAAAACCGCCAAACGCGGCCCCCGCATCGACGGCGAGTGGTGC
CGATAACGCCTCTGGTGGCAACTCCTCCCGTGCCGGACGTGGGCAGACAA
ACCAAGTGGCCGGGAAGAAGAAATCTCTCTGGCACCGCGTCTGTGGCTGT
TTTGGTTACGGCGAGTCAGCCCCAACAGAAGGAAGAGGAACCGCAAGCGG
CCGGCGTCAAGCCCCGTCGTCGGACCTGAACTCTCTGGAGGGGGGGGAGT
CCCTGCACCTACCCTTGTTGTCGAGCACCCATGGCGGGGGCGCGGGCAGG
AGCGACGACGTCGGCTACGACAACGGCAACGGCGGTGGCGGCTTGTCCAT
CAACGGAGGCGCGTCGGAGGAAAAATCGGTCGCGGTCGGGGAGGGGGACA
CGCCGACGAAGACGGAGATCATCGAGACAGAGGGGGCGCGGAGGGAGCGT
GAGAAGGAGGAGGCGGAACAAGTGGCGGCGGTGGCGGCCGAGGCGGCCGA
GGCGGCCAAGACTCTTGCCGAGAGGAAGAAGAGCGGGTTCCTGGTCGTCA
TGTATGCCGTGAGCACGGCCATGCAGGTGTACACCGGCGTGAAATGCGAT
CGGTTCCACTTCACCAAGGAGGTCCCCGAGGGAGTTCTCATGGGAATCGG
CGTTCTGTGGCTGAACGCGATGGTGGGGGCCCTCACCCAGCTCGTCGCCG
ACGCGACCATGGAGGAGGGTCTTCTTGCACCCTCTCTTCACCCTCACAGA
TTGTACCCGGGGTCGACGGCTGGACATCGGTGCGACCAATGTCAGCAGAG
AATCAAGAGCCAAGACGCCAAGGCGTGGAGGTGCAAGCTCTGCGACTTCG
ACCTCTGCCGTTCCTGCTACGAGAAGAAGGACCGCCGCGGAGCAGAAGGC
GCGCTGAGGGGGGACAAGGGGGTGCGGGACGAGAACGACCTGCCGACGCT
GACCTACTTCAAGAGGGCGCTCCGCCTCGCCGGCCCGCACTGGCCCTTCT
TCGTGGTGGCGTTCGCGTGCCTGGCCATCTCCGACACCGCCAGGATATAC
CTCGCCCTCACAATTTCAATCGTCACCACTTGCTGCGTCGCTGTACAATA
CTTGACGCTAGTCGCACGTGGGGGAAGACTCGAAGTCGCTGTGCATGGGA
TGCGCTCTGCGTACGTACGTTGTTGGGGGGGGGTCGACCATACTGTGTAC
TGTGGGCCGGGACAGCTAGCCCCGCGGCTGCGCCGTGTCGGGACTGCCTC
CCCCAGTATTGGAAATTGTTGA
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