mRNA_E_fasciculatus_S2_contig784.16009.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Match: MFS_1_like (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE) HSP 1 Score: 331 bits (848), Expect = 6.640e-99 Identity = 225/357 (63.03%), Postives = 233/357 (65.27%), Query Frame = 1
Query: 1345 AVAAVEISVSVSESPVDXXXXXAIGHASGGDRFGSQPLWGAVDFGVASLVPGYVSDLNGGSFSGVMLVFVGNVLLALVASTGVPVGQVNNDTDNERPPRRRRSRRRVSWVCCLMIVHVDTLSCFDGRTVFRPLIDDSGIHDALHCFNVVNGSSAFGEALESVDREGNDAGVN--GVHQEHEKEGSSLRPTVSTTXXXXXXXXXXXXSDNHLD----H*DDDNEAQTNDDDALLEYHPGDSSTGGEDKREGGAE-GAREKAGVVMAIGIMLGTDESASFFMAVVLSGMGRVVIDTFLFIRLEELDGSHVL*GLAHRIMFAAEVLFFYLSGPLIRRVGVRGVIALAQLAYLTRFVYYSV 2394
AVAAVEISVSVSESPV AI HASGGD FGSQ LWGAV FG ASLV GYV DL GGSFSGVMLVFVGNVL+AL+ASTGVP+GQVNND +D I A GS+A GE LES DRE ND G+ GVHQEH+K GSSLR TVST+ XXXXXXXX NHLD QT D DALLEYHPGDS TGG K GA EKAGVVMAI IML TDESASFF AVVLSGMGR VIDTFLFIRLEEL GS VL GLA IM AEV FFYLSGPLIRR G RGVIALAQLAYLTRFVYYSV
Sbjct: 64 AVAAVEISVSVSESPVGSLVDAAIRHASGGDGFGSQRLWGAVGFGTASLVAGYVCDLYGGSFSGVMLVFVGNVLVALMASTGVPIGQVNNDXXX------------------------------------XXXXNDQNIEGAS------GGSNASGEVLESADRENNDKGIGWKGVHQEHKKVGSSLRLTVSTSNTSTXXXXXXXXXXNHLDLHXXXXXXXXXXQTTDGDALLEYHPGDSRTGGGXKXXXXXXXGAGEKAGVVMAIRIMLSTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRVLCGLARLIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSV 378
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Match: MFS_1_like (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE) HSP 1 Score: 234 bits (596), Expect = 1.330e-62 Identity = 195/477 (40.88%), Postives = 246/477 (51.57%), Query Frame = 1
Query: 1345 AVAAVEISVSVSESPVDXXXXXAIGHASGGDRFGSQPLWGAVDFGVASLVPGYVSDLNGGSFSGVMLVFVGNVLLALVASTGVPVGQVNNDTDNERPPRRRRSRRRVSWVCCLMIVHVDTLSCFDGRTVFRPLIDDSGIHDALHCFNVVNGSSAFGEALESVDREGNDAGVNGVHQEHEKEGSSLRPTVSTTXXXXXXXXXXXXSDNHLDH*DDDNEAQTNDD----DALL-------EYHPGDSSTGGEDKREGGAEG----AREKAGVVMAIGIMLGTDESASFFMAVVLSGMGRVVIDTFLFIRLEELDGSHVL*GLAHRIMFAAEVLFFYLSGPLIRRVGVRGVIALAQLAYLTRFVYYSV--DSSRAVVGAAFGGVARPYLRGHVGSYHRLRAPNRSSSLANNDPRCGVRAAWGPRVGAGGDAGRSAVRRLRRQTVLRCERL--FAI-VVFAPASLPTA--RHWCKSRGVGG 2709
AVAAVE S S S SP+ +I A GGD +G+ LWGA+ FG+ASL+ G+V D GGS++GVM+VFV NV +A+ ASTGVP+G+ T ++ V T F+ + + + G + A + E AG+ G +++ P V+T +D + DH DD+E + ND+ ALL + G + G G EG A+E+ GV+MA+ IM T ESASFFMAV LSGMG VIDTFLFIRLEEL GSHVL GLA IM AEV FFYLSGPLIRRVGVRGVIAL Q+AYLTRF+YYSV + + G+ + Y AP +SLAN+D R VR GP + A GDAGR+ VRR R V R +R FA+ V PA T RH R GG
Sbjct: 95 AVAAVEASCSFSTSPIGSLIDSSIRQAFGGDGYGNLRLWGAIGFGIASLIGGFVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRD---KQLGGXXXXXXXXXXXXXVATGGDFE--------LGEKRTESPVSPRTATRGCAV---ARDKTAGEPKCAGLIGT--------AAVTPAVATDTAAT--------ADGNHDHLYDDDEPEGNDEAQTHSALLSRPRTTSDKDGGGDTNGSSGASRGDGEGPGRKAKEQGGVLMAVRIMTNTGESASFFMAVGLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLREPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPG--TSLANDDSRSRVRNPLGPGLWARGDAGRAPVRRPRCFQVFRRQRRSSFAVPAVAGPAHGETVDQRHRRARRAAGG 539
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Match: MFS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI) HSP 1 Score: 187 bits (474), Expect = 7.750e-47 Identity = 143/341 (41.94%), Postives = 182/341 (53.37%), Query Frame = 1
Query: 1414 IGHASGGDRFGSQPLWGAVDFGVASLVPGYVSDLNGGSFSGVMLVFVGNVLLALVASTGVPVGQVNNDTDNERPPRRRRSRRRVSWVCCLMIVHVDTLSCFD--GRTVFRPLIDDSGIHDALHCFNVVNGSSAFGEALESVDREGNDAGVNGVHQEHEKEGSSLRPTVSTTXXXXXXXXXXXXSDNHLDH*DDDNEAQTNDDDALLEYHP---GDSSTGGEDKREGGAEG---------AREKAGVVMAIGIMLGTDESASFFMAVVLSGMGRVVIDTFLFIRLEELDGSHVL*GLAHRIMFAAEVLFFYLSGPLIRRVGVRGVIALAQLAYLTRFVYYSV 2394
+G S G G+ LWGA+ FG+ASL+ GYV D GGS++GVM+VFV NV +A+ ASTGVP+G+ T R + V T F+ ++ P+ + S A + + E G+ G +++ P V+T D+ D + ++EAQT+ A L P D GG++ G A+E+ GV+MA+ IM+ T ESASFFMAV LSGMG VIDTFLFIRLEEL GSHVL GLA IM AEV FFYLSGPLIRRVGVRGVIAL Q+AYLTRF+YYSV
Sbjct: 66 LGMPSEGTDTGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTAT------RDKQLGXXXXXXXXXNGVATGGDFELGEKSTESPVSPRTS-------------SRGCAVARDKTEGEPECGGLIGT--------AAVTPAVATDTAATADDIKLHLRDD--DEPEGNDEAQTH---AALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSV 374
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Match: MFS_1_like (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI17_9PHAE) HSP 1 Score: 148 bits (373), Expect = 1.720e-35 Identity = 116/352 (32.95%), Postives = 157/352 (44.60%), Query Frame = 1
Query: 1345 AVAAVEISVSVSESPVDXXXXXAIGHASGGDRFGSQPLWGAVDFGVASLVPGYVSDLNGGSFSGVMLVFVGNVLLALVASTGVPVGQVNNDT--DNERPPRRRRSRRRVSWVCCLMIVHVDTLSCFDGRTVFRPLIDDSGIHDALHCFNVVNGSSAFGEALESVDREGNDAGVNGVHQEHEKEGSSLRPTVSTTXXXXXXXXXXXXSDNHLDH*DDDNEAQTNDDDALLEYHPGDSSTGGEDKREGGAEGAREKAGVVMAIGIMLGTDESASFFMAVVLSGMGRVVIDTFLFIRLEELDGSHVL*GLAHRIMFAAEVLFFYLSGPLIRRVGVRGVIALAQLAYLTRFVYYSV 2394
A+AAVEIS SVS SP++ A+ A G +G+Q WGA +G+A+L+ G+V D GGS+ G+M+VFV + LAL+A+ GVPVG+ N ++ PR RS +W H +T GR E E ++ RP V +D E+ D E H V + IM ++ SFF+ V+LSGM + VIDTFLFI L+EL GSHVL GLA +M EV FFY+SG IR++G R V+AL+Q+ Y+ R VYYSV
Sbjct: 9 ALAAVEISCSVSSSPMNSLIDAAVRKAFGSGGYGTQRSWGAAGYGLATLISGFVYDAAGGSYDGLMVVFVTVLALALLAALGVPVGRTNEPAGGQDDEEPRGDRSGTSDNWSA-----HGETELVETGRA-------------------------------------------------REDEVTNTRPCVGMNVDDL-----------------EDEESSKRPDHVEQEEHR-----------------------VASVLWIMFSAPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSV 266
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Match: MFS_1_like (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X9_ECTSI) HSP 1 Score: 111 bits (277), Expect = 5.520e-24 Identity = 53/87 (60.92%), Postives = 63/87 (72.41%), Query Frame = 2
Query: 2396 ILREPWWVLPSEVLHDLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHGXXXXXXXXXXXGVLYAGLGDRRCFAVSASLPSLSLL 2656
+L +PWWVLP+E+ H LTFAAMW+ATTDYAH IAPAHLRTT+Q +V GL GV YA LG RRCF +A+LP+LSLL
Sbjct: 57 VLSDPWWVLPAELFHGLTFAAMWSATTDYAHGIAPAHLRTTMQASVGGLKRGLGYGLGAIVGGVSYANLGPRRCFLATAALPALSLL 143
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI) HSP 1 Score: 104 bits (260), Expect = 4.690e-20 Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 1
Query: 2092 REKAGVVMAIGIMLGTDESASFFMAVVLSGMGRVVIDTFLFIRLEELDGSHVL*GLAHRIMFAAEVLFFYLSGPLIRRVGVRGVIALAQLAYLTRFVYYSV 2394
+E+ V + IM T ++ SFF+ V+LSGM + VIDTFLFI L+EL GSHVL GLA +M EV FFY+SG IR++G R V+AL+Q+ Y+ R VYYSV
Sbjct: 225 QEEHRVASVLWIMFSTPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSV 325
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR9_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 8.160e-12 Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = -2
Query: 1459 NASRRDQRQQNIPHKHQHHA*KAASVQIGHIPGNQRGDPEVHSTP 1593
+A RR QR +NIPHK+QHHA KA+SVQIGHIPG+QRGDPE HSTP
Sbjct: 190 SARRRHQRHENIPHKYQHHAGKASSVQIGHIPGDQRGDPEAHSTP 234
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Match: MFS_1_like (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X7_ECTSI) HSP 1 Score: 68.9 bits (167), Expect = 1.190e-10 Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 2
Query: 2393 SILREPWWVLPSEVLHDLTFAAMWAATTDYAHQIAP 2500
S+L +PWWVLP+E+LH LTFAAMWAATTDYAH IAP
Sbjct: 40 SVLSDPWWVLPAELLHGLTFAAMWAATTDYAHGIAP 75
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MNN8_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 3.150e-8 Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 2
Query: 2393 SILREPWWVLPSEVLHDLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHGXXXXXXXXXXXGVLYAGLGDRRCFAVSASLPSLSLLL 2659
S+L+ PWWVLP E+LH LTF AM+AA +Y+ + P +L T QG SG++ G LY G R + A SL++++
Sbjct: 36 SVLQSPWWVLPLELLHGLTFGAMYAAGINYSSNLFPPNLSATGQGIFSGIYAGLGPLCGSLLGGWLYDQYGPRFMYQSMACFISLAVVI 124
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Match: Hypothetical (protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL95_9RHOD) HSP 1 Score: 68.2 bits (165), Expect = 5.470e-8 Identity = 33/80 (41.25%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 2155 FFMAVVLSGMGRVVIDTFLFIRLEELDGSHVL*GLAHRIMFAAEVLFFYLSGPLIRRVGVRGVIALAQLAYLTRFVYYSV 2394
FF+ +++SG+G +I+TFLF+RL EL + + G++ +M E+ FF+ + L+ R GV GV+ + Q AY RF +YSV
Sbjct: 262 FFLILLISGLGNGMIETFLFVRLNELGATSRVLGISRLLMCLGELPFFHYNEQLVSRFGVFGVLGIVQCAYCVRFFWYSV 341 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig784.16009.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig784.16009.1 >prot_E_fasciculatus_S2_contig784.16009.1 ID=prot_E_fasciculatus_S2_contig784.16009.1|Name=mRNA_E_fasciculatus_S2_contig784.16009.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=204bp MFAAEVLFFYLSGPLIRRVGVRGVIALAQLAYLTRFVYYSVDSSRAVVGAback to top mRNA from alignment at E_fasciculatus_S2_contig784:9631..14483+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig784.16009.1 ID=mRNA_E_fasciculatus_S2_contig784.16009.1|Name=mRNA_E_fasciculatus_S2_contig784.16009.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4853bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig784:9631..14483+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig784:9631..14483+ >mRNA_E_fasciculatus_S2_contig784.16009.1 ID=mRNA_E_fasciculatus_S2_contig784.16009.1|Name=mRNA_E_fasciculatus_S2_contig784.16009.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=612bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig784:9631..14483+ (Ectocarpus fasciculatus EfasUO2)back to top |