mRNA_E_fasciculatus_S2_contig7833.16004.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ5_ECTSI) HSP 1 Score: 336 bits (861), Expect = 2.400e-110 Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 1
Query: 1 MLGRRHLRLGEALSRGLQRHAPSSCGRASSTQAAALAKSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFRRAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARVEAKETEVVRDQLQREGIELISGTARFLPGSEGEPHRVMVLRTSEKTEAKT 534
MLGRRHLRLGEALSRGLQRHAPS CGRASSTQAAALAKSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFR AVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARVEAKETEVVRDQLQREGIELISGTARFLPGSEGEPHRVMVLRTSEKTEAKT
Sbjct: 1 MLGRRHLRLGEALSRGLQRHAPSLCGRASSTQAAALAKSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARVEAKETEVVRDQLQREGIELISGTARFLPGSEGEPHRVMVLRTSEKTEAKT 178
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER9_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.040e-45 Identity = 85/147 (57.82%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 124 HYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFRRAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPGSEGEPH---------RVMVLRTSEKTEA 528
HYDL+I+GSGPAAQKCA++SAK G+ V +VDK +GGVCVHTGTIPSKTFR AVLHLTG+RHQGFYGR+ Q R +++PD+L RV E ET++V DQ++REG+E+I+GTARF E + RVMVL+T E+
Sbjct: 55 HYDLIIIGSGPAAQKCAVDSAKLGRRVAVVDKLGMIGGVCVHTGTIPSKTFREAVLHLTGFRHQGFYGRAYQPWRERISVPDLLLRVQKVEKTETDIVVDQMRREGVEVITGTARFAEADEDDAFTDATSEGAVRVMVLKTDASHES 201
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNB1_9STRA) HSP 1 Score: 159 bits (403), Expect = 2.180e-43 Identity = 88/172 (51.16%), Postives = 117/172 (68.02%), Query Frame = 1
Query: 58 HAPSSCGRASSTQAAALAKS----------SAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFRRAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPGSEGEPH-RVMVLRTSEKTEAK 531
HAPSS +S Q L+ + SAHYDL+++GSGPAAQKCAI+S K G+ V ++DK+SQ+GGVCVHTGTIPSKTFR AVLHLTG+RHQGFYG+S+ + ++ ++L RV E E EV R Q++R G+ L++GTARFL + H ++ VL T + E K
Sbjct: 26 HAPSSSLPSSPLQCRTLSSTGGAGFYNFPPSAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTGTIPSKTFREAVLHLTGYRHQGFYGKSTFTSSRRSSMNEILQRVQKVEDVEAEVTRHQMRRNGVHLVTGTARFLENGANDAHVKLAVLLTDPEQERK 197
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D530_HETAK) HSP 1 Score: 145 bits (365), Expect = 8.470e-42 Identity = 68/102 (66.67%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 172 AIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFRRAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLP 468
AI++AK GK VCIVDK + GGVC+HTGT+PSKTFR AVLHLTG+RHQGFYG+S Q R + +PD+LARV EA ET+++RDQ+QR G+EL++GTARFLP
Sbjct: 1 AIDAAKRGKRVCIVDKEAMQGGVCIHTGTVPSKTFREAVLHLTGYRHQGFYGKSYQPWRKRIRVPDILARVKRVEADETDIIRDQVQRNGVELVTGTARFLP 102
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Match: Pyr_redox_2 (domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X7S1_9STRA) HSP 1 Score: 147 bits (372), Expect = 9.660e-41 Identity = 73/124 (58.87%), Postives = 95/124 (76.61%), Query Frame = 1
Query: 112 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFRRAVLHLTGWRHQGFY-GRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPG 471
++S H+DL+++GSGPA QKCAI+SAK+GKSV ++DK LGGVCVHTGT+PSKTFR A LHLTG+RH+ FY G+++ R + D+L RV E ET++ R QL R G+ELI+GTARFL G
Sbjct: 53 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAVIDKRDMLGGVCVHTGTVPSKTFREATLHLTGYRHRSFYNGQTAPTKR--FGVEDILQRVKKVEGAETDITRHQLLRNGVELINGTARFLSG 174
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Match: Soluble (pyridine nucleotide n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKW9_PLAHL) HSP 1 Score: 153 bits (386), Expect = 1.890e-40 Identity = 77/134 (57.46%), Postives = 100/134 (74.63%), Query Frame = 1
Query: 112 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFRRAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPGSEGEPHRVMVL 504
++S H+DL+++GSGPA QKCAI+SAK+GKSV I+DK LGGVCVHTGTIPSKTFR A LHLTG+RH+ FY ++ + D+L RV E+ ET++ R QL R G++LI+GTARFLPGS+ H + VL
Sbjct: 31 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIIDKRDMLGGVCVHTGTIPSKTFREAALHLTGYRHKAFYNGQGGPSKR-FGVEDILQRVKKVESAETDITRHQLLRNGVQLINGTARFLPGSK---HMIAVL 160
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Match: Putative (soluble pyridine nucleotide transhydrogenase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FH22_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.070e-39 Identity = 75/134 (55.97%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 112 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFRRAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPGSEGEPHRVMVL 504
++S H+DL+++GSGPA QKCAI+SAK+GKSV I+DK +GGVCVHTGT+PSKTFR A LHLTG+RH+ FY + ++ + D+L RV E ET++ R QL R G++LI+GTARFLPG+ H V VL
Sbjct: 51 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIIDKRDMMGGVCVHTGTVPSKTFREAALHLTGYRHKAFYNGQAGPSKR-FGVEDILQRVKKVEDAETDITRHQLMRNGVQLINGTARFLPGNN---HMVAVL 180
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BCY3_HYAAE) HSP 1 Score: 150 bits (379), Expect = 1.600e-39 Identity = 75/134 (55.97%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 112 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFRRAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPGSEGEPHRVMVL 504
++S H+DL+++GSGPA QKCAI+SAK+G SV IVDK LGGVCVHTGT+PSKTFR A LHLTG+RH+ FY + ++ V + D+L RV E ET++ R QL R G++LI+GTARF+PG+ H + VL
Sbjct: 48 RASEHFDLIVIGSGPAGQKCAIDSAKHGYSVAIVDKRDMLGGVCVHTGTVPSKTFREAALHLTGYRHRAFYNGQAGPSKR-VGVEDILQRVNKVEKAETDITRHQLMRNGVQLITGTARFMPGNS---HMIAVL 177
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H1X6_9STRA) HSP 1 Score: 149 bits (376), Expect = 4.230e-39 Identity = 81/143 (56.64%), Postives = 103/143 (72.03%), Query Frame = 1
Query: 112 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSK--TFRRAVLHLTGWRHQGFY---GRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPGSEGEPHRVMVLRTSE 516
++S H+DL+++GSGPA QKCAI+SAK+GKSV IVDK LGGVCVHTGT+PSK TFR A +HLTG+RH+ FY G S+R + + D+L RV EA ET++ R QLQR G++LISGTARFL G + H + VL E
Sbjct: 51 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIVDKRDMLGGVCVHTGTVPSKASTFREAAMHLTGYRHRAFYNGHGGISKR----IGVEDILQRVKKVEAAETDITRHQLQRNGVQLISGTARFLAG---DSHMLAVLSNEE 186
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Match: Uncharacterized (protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C5I4_SAPPC) HSP 1 Score: 149 bits (375), Expect = 5.560e-39 Identity = 93/182 (51.10%), Postives = 118/182 (64.84%), Query Frame = 1
Query: 1 MLGRRHLRLGEALSR-GLQRHAPSSCGRASS-TQAAALAKSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFRRAVLHLTGWRHQGFYGRS-SQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPGSEGEPHRVMVLRTSEKTEA 528
+LGRR R + R GL A + ASS T ++S H+DLV++GSGP+ QKCAI+SAK+GK V I+DK GGVCVHTGTIPSKTFR AVLHLT RH+GFYG + S + ++I D+L RV E+ E ++ R+QL R GI LI+GTARFLP + + V VL TEA
Sbjct: 5 VLGRRSRRAAVPVLRAGLSTEAEAKADDASSFTNILRNLRASEHFDLVVIGSGPSGQKCAIDSAKHGKKVAIIDKKDMHGGVCVHTGTIPSKTFREAVLHLTAHRHKGFYGNAYSATSGKRMSIQDILDRVQKVESAEMDLTRNQLLRNGIYLINGTARFLP--DADKKTVAVLSNDSYTEA 184 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7833.16004.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7833.16004.1 >prot_E_fasciculatus_S2_contig7833.16004.1 ID=prot_E_fasciculatus_S2_contig7833.16004.1|Name=mRNA_E_fasciculatus_S2_contig7833.16004.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=178bp MLGRRHLRLGEALSRGLQRHAPSSCGRASSTQAAALAKSSAHYDLVIVGSback to top mRNA from alignment at E_fasciculatus_S2_contig7833:369..1835- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7833.16004.1 ID=mRNA_E_fasciculatus_S2_contig7833.16004.1|Name=mRNA_E_fasciculatus_S2_contig7833.16004.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1467bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7833:369..1835- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7833:369..1835- >mRNA_E_fasciculatus_S2_contig7833.16004.1 ID=mRNA_E_fasciculatus_S2_contig7833.16004.1|Name=mRNA_E_fasciculatus_S2_contig7833.16004.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=534bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7833:369..1835- (Ectocarpus fasciculatus EfasUO2)back to top |