mRNA_E_fasciculatus_S2_contig782.15990.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Match: CBFD_NFYB_HMF (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5I3_9PHAE) HSP 1 Score: 252 bits (643), Expect = 1.160e-83 Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 2
Query: 47 MAEEAIVDTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLAKYRESVKLEKPDRKGKRDDTSEAMATSGGYYG 439
MAEEAIVDTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYL+KYRESVKLEKPDRKGKRDD SEAMAT GGYYG
Sbjct: 1 MAEEAIVDTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLSKYRESVKLEKPDRKGKRDDASEAMATGGGYYG 131
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Match: Nuclear (transcription factor Y subunit B4 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU51_9STRA) HSP 1 Score: 194 bits (494), Expect = 7.990e-61 Identity = 97/106 (91.51%), Postives = 103/106 (97.17%), Query Frame = 2
Query: 68 DTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLAKYRESVKLEKPDRK 385
D EELREQDRFLPIANISRIMKKSLPD AKIAKDAKETVQECVSEFICFITSEASDKC+QEKRKTINGED+LWAMSTLGFDKYV+PLK+YLAKYRESVK EKP++K
Sbjct: 9 DAEELREQDRFLPIANISRIMKKSLPDAAKIAKDAKETVQECVSEFICFITSEASDKCQQEKRKTINGEDILWAMSTLGFDKYVEPLKLYLAKYRESVKGEKPEKK 114
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U555_9STRA) HSP 1 Score: 189 bits (480), Expect = 5.450e-59 Identity = 98/127 (77.17%), Postives = 111/127 (87.40%), Query Frame = 2
Query: 47 MAEEAIVDTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLAKYRESVKLEKPDRKGKRDDTSEAMATSG 427
MAE+ D E+REQDRFLPIANI+RIMK+SLPDNAKIAKDAKE VQECVSEFI FI+SEASDKC+QEKRKTING+DL+WAMSTLGFD YV+PLK+YL+KYRESVK EKP K + D SEA+AT G
Sbjct: 1 MAEDHGDDMAEIREQDRFLPIANIARIMKRSLPDNAKIAKDAKECVQECVSEFISFISSEASDKCQQEKRKTINGDDLIWAMSTLGFDNYVEPLKLYLSKYRESVKGEKPGPKMRGADGSEAIATGG 127
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SNW2_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.970e-58 Identity = 92/111 (82.88%), Postives = 106/111 (95.50%), Query Frame = 2
Query: 74 EELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLAKYRESVKLEKPDRKGKRDDTS 406
+E+REQDRFLPIAN+SRIMK+SLP NAKIAKDAKETVQECVSEFI FITSEASDKC+QEKRKTING+DLLWAM+TLGFDKY+DPLK+YL+KYRES+K EKP++K KRD+ S
Sbjct: 17 DEMREQDRFLPIANVSRIMKRSLPQNAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMNTLGFDKYMDPLKVYLSKYRESIKGEKPEKKLKRDNVS 127
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U1F424_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.780e-56 Identity = 90/106 (84.91%), Postives = 101/106 (95.28%), Query Frame = 2
Query: 68 DTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLAKYRESVKLEKPDRK 385
D EE+REQDRFLPIANI+RIMK +LP+NAKIAKD+KET+QECVSEFI FITSEASDKC QEKRKTING+DLLWAMSTLGFDKYV+PLKIYLAKYRE+V+ EKPD+K
Sbjct: 11 DYEEIREQDRFLPIANIARIMKLTLPENAKIAKDSKETLQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKIYLAKYREAVRGEKPDKK 116
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKV9_9STRA) HSP 1 Score: 179 bits (455), Expect = 7.180e-55 Identity = 90/118 (76.27%), Postives = 105/118 (88.98%), Query Frame = 2
Query: 74 EELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLAKYRESVKLEKPDRKGKRDDTSEAMATSG 427
EE+REQDR+LPIANI+RIMK +LP+NAKIAKD+KETVQECVSEFI FITSEASDKC QEKRKTING+DLLWAMSTLGFDKYV+PLK+YL KYRE+V+ +KPD KG + AM+ +G
Sbjct: 45 EEIREQDRYLPIANIARIMKNTLPENAKIAKDSKETVQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLGKYREAVRGDKPDNKG---GGASAMSNAG 159
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EHZ1_TRICV) HSP 1 Score: 178 bits (451), Expect = 1.490e-54 Identity = 86/103 (83.50%), Postives = 99/103 (96.12%), Query Frame = 2
Query: 74 EELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLAKYRESVKLEKPDR 382
EE+REQDR+LPIANI+RIMK +LPDNAKIAKD+KETVQECVSEFI FITSEASDKC QEKRKTING+DLLWAMSTLGFDKYV+PLK+YLAKYRE+V+ +KP++
Sbjct: 19 EEIREQDRYLPIANIARIMKNTLPDNAKIAKDSKETVQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLAKYREAVRGDKPEK 121
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Match: CBFD_NFYB_HMF (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEI5_9STRA) HSP 1 Score: 179 bits (453), Expect = 2.470e-54 Identity = 96/122 (78.69%), Postives = 106/122 (86.89%), Query Frame = 2
Query: 74 EELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLAKYRESVK-LEKPD--RKGKRDDTSEAMATSGG 430
EE+REQDR+LPIANISRIMKKSLP NAKIAKDAKETVQECVSEFI FITSEASDKC+QEKRKTING+DLLWAMSTLGFDKYV+PLK YL KYRESVK EK D +KGK + T +++ G
Sbjct: 19 EEVREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKHYLVKYRESVKGAEKADGGKKGKSEGTQVTGSSAAG 140
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGW8_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.600e-54 Identity = 87/105 (82.86%), Postives = 100/105 (95.24%), Query Frame = 2
Query: 68 DTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLAKYRESVKLEKPDR 382
D EE+REQDR+LPIANI+RIMK +LPDNAKIAKD+KETVQECVSEFI FITSEASDKC QEKRKTING+DLLWAMSTLGFDKYV+PLK+YLAKYRE+V+ +KP++
Sbjct: 55 DYEEIREQDRYLPIANIARIMKNTLPDNAKIAKDSKETVQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLAKYREAVRGDKPEK 159
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Match: Histone-fold-containing (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRM2_9STRA) HSP 1 Score: 178 bits (451), Expect = 3.100e-54 Identity = 86/105 (81.90%), Postives = 100/105 (95.24%), Query Frame = 2
Query: 68 DTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLAKYRESVKLEKPDR 382
D EE+REQDR+LPIANI+RIMK +LP+NAKIAKD+KETVQECVSEFI FITSEASDKC QEKRKTING+DLLWAMSTLGFDKYV+PLK+YL+KYRE+V+ +KPD+
Sbjct: 21 DYEEIREQDRYLPIANIARIMKNTLPENAKIAKDSKETVQECVSEFISFITSEASDKCLQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLSKYREAVRGDKPDK 125 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig782.15990.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig782.15990.1 >prot_E_fasciculatus_S2_contig782.15990.1 ID=prot_E_fasciculatus_S2_contig782.15990.1|Name=mRNA_E_fasciculatus_S2_contig782.15990.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=152bp MAEEAIVDTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVback to top mRNA from alignment at E_fasciculatus_S2_contig782:9508..12225- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig782.15990.1 ID=mRNA_E_fasciculatus_S2_contig782.15990.1|Name=mRNA_E_fasciculatus_S2_contig782.15990.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2718bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig782:9508..12225- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig782:9508..12225- >mRNA_E_fasciculatus_S2_contig782.15990.1 ID=mRNA_E_fasciculatus_S2_contig782.15990.1|Name=mRNA_E_fasciculatus_S2_contig782.15990.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=456bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig782:9508..12225- (Ectocarpus fasciculatus EfasUO2)back to top |