mRNA_E_fasciculatus_S2_contig7814.15985.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Match: Ephrin_rec_like (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U0_ECTSI) HSP 1 Score: 409 bits (1051), Expect = 7.260e-143 Identity = 193/207 (93.24%), Postives = 197/207 (95.17%), Query Frame = 1
Query: 1 MNPDGGLLRAFVVPTTLALAWQAWTTMTASNSTLFVSATLEQCHLDCAGNTTAELVADAALNGVSWSVWDTQRLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPQNTTCGGLCDNFYARNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCADGVMSVCSPGTYRNTSYDMINTCTQCPKGTYRATGKARGVDD 621
M PDGGLLRAFVVPTT ALAWQAWTT+TASNS+LFVSATLEQCHLDCAGNTTAELVADAALNG SWSVWDTQRLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSP+NTTC GLCD+FY RNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCA GVMS CSPGTYRNTSYDMINTCTQCPKGTYRA GK GVDD
Sbjct: 1 MKPDGGLLRAFVVPTTFALAWQAWTTLTASNSSLFVSATLEQCHLDCAGNTTAELVADAALNGGSWSVWDTQRLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPRNTTCSGLCDDFYVRNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCAAGVMSECSPGTYRNTSYDMINTCTQCPKGTYRAKGKGSGVDD 207
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQK9_9STRA) HSP 1 Score: 131 bits (330), Expect = 6.430e-34 Identity = 63/141 (44.68%), Postives = 83/141 (58.87%), Query Frame = 1
Query: 217 RLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPQNTTCGGLCDNFYARNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCADGVMSVCSPGTYRNTSYDM-------INTCTQCPKGTYRATGKARGVD 618
RL GPT+ + +P+A A P FCQLGC F+ P+NTTC LC+ FY ++VG ND AE+A+LEC+DGC IA+ CQ GY C +G+M C GTYR D+ +CT+CP G YR+T K + D
Sbjct: 44 RLTGPTK--MQQTKQHPWAMAAFPTKQKGFCQLGCQLFYTEVPKNTTCKRLCNYFYRYKITVGYNDLAEEAKLECQDGCEIALQVCQAGYYCDEGIMLPCPAGTYREPVTDVSILALEKATSCTKCPYGRYRSTNKGKSAD 182
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV74_9STRA) HSP 1 Score: 131 bits (329), Expect = 8.820e-34 Identity = 67/151 (44.37%), Postives = 82/151 (54.30%), Query Frame = 1
Query: 157 AELVADAALNGVSWSVWDTQRLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPQNTTCGGLCDNFYARNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCADGVMSVCSPGTYRNTSYDMINTCTQCPKGTYRATGKAR 609
A L A A L+ D R VGPT P + +P+ AP P P+ FCQ GCS FF P T C CD Y +V+V ND AE ARLECRDGC + +LRCQ GY C G M C GTYR+ + + C CP+G YR+ + R
Sbjct: 11 ALLPAAADLDHCKADCSDAARPVGPTRPPN--TRGHPWFPAPNPNPYLQFCQTGCSLFFESYPVLTDCQAECDRIYRYDVTVAYNDQAEVARLECRDGCEMGLLRCQAGYYCTAGSMLQCPIGTYRDVDFAAVEACVDCPRGRYRSDPRGR 159
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEG6_9STRA) HSP 1 Score: 117 bits (294), Expect = 6.850e-29 Identity = 60/142 (42.25%), Postives = 77/142 (54.23%), Query Frame = 1
Query: 217 RLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPQNTTCGGLCDNFYARNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCADGVMSVCSPGTYRNTSYDM-------INTCTQCPKGTYRATGKARGVDD 621
RL GP +P T+P+ A P +FC+LGC YFF+ N TC C Y + G +D AE A+LEC DGCNIA+ CQ GY C +G M+VC G YR + D+ ++TC CP G YRA K R +D
Sbjct: 44 RLFGPIKPPD--TRTHPWKVAQFPSTTTAFCKLGCQYFFSYYSNNNTCINQCKYQYRYQATTGYSDSAELAKLECLDGCNIALSICQAGYYCVNGNMTVCPAGKYRESVSDLSLITLEKVHTCINCPYGRYRALDKGRSAND 183
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHA6_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.830e-27 Identity = 54/133 (40.60%), Postives = 76/133 (57.14%), Query Frame = 1
Query: 247 EVNATYPYARAPLPLPFHSFCQLGCSYFFAGS-----PQN-------------TTCGGLCDNFYARNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCADGVMSVCSPGTYRNTSYDMINTCTQCPKGTYR 591
++ +P+AR+P P P+ FCQ+GC+Y++ PQ + C C++ + +++ G +D AE ARLEC DGC IA LRCQPGYSC +G M+ C PGTYR+ Y + C CP G YR
Sbjct: 166 DLTRPHPWARSPEPNPYMKFCQIGCTYYYNQEQWGIYPQREVPSDVVENWNTLSACLARCNHTFRYDITTGYSDIAEMARLECWDGCQIANLRCQPGYSCFNGDMNPCKPGTYRHNEYTRVEQCYDCPNGRYR 298
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Match: Ephrin_rec_like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR7_9STRA) HSP 1 Score: 111 bits (278), Expect = 9.260e-27 Identity = 57/131 (43.51%), Postives = 72/131 (54.96%), Query Frame = 1
Query: 241 ASEVNATYPYARAPLP--LPFHSFCQLGCSYFFAGSPQNTTCGGLCDNFYARNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSC--ADGVMSVCSPGTYRNTSYDMINTCTQCPKGTYRATGKARGVDD 621
A V T+PYA A FC+ GC+YF++ SP +C CD Y + S ++D+AEKARL+CRDGC I CQPGY C A G++ C PGTYRN S + C CP G YR G+ D
Sbjct: 12 AYAVVRTHPYAVADATRLATLTQFCEAGCAYFYSSSPTLQSCDVNCDEMYRQRTSFNVSDWAEKARLDCRDGCRIGFRVCQPGYKCEHAHGMVE-CEPGTYRNASDADVTQCIACPAGHYREAPGGAGLLD 141
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZTF7_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.200e-22 Identity = 51/136 (37.50%), Postives = 69/136 (50.74%), Query Frame = 1
Query: 295 FHSFCQLGCSYFFAG--SPQNTT-CGGLCDNFYARNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCAD-------------------------GVMSVCSPGTYRNTSYDMINTCTQCPKGTYRATGKARGVD 618
++ FC++GC+ FF+ P + + C CD Y N++VG ND E +RLECRDGC +A+ RCQPGY C+ G MS C G YR+ SYD I C CP G +R K + +D
Sbjct: 96 YYKFCEVGCTLFFSSISDPMHLSECTHKCDQIYQYNITVGYNDLMEVSRLECRDGCQMALKRCQPGYFCSQVSLLNDDENSTLGPKSHGRDTRYTGGYMSHCPAGKYRDFSYDAIEMCVDCPPGRFREDTKGKSLD 231
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSZ0_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.350e-22 Identity = 50/119 (42.02%), Postives = 66/119 (55.46%), Query Frame = 1
Query: 307 CQLGCSYFFA---GSPQNTTCGGLCDNFYARNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCAD---------------------GVMSVCSPGTYRNTSYDMINTCTQCPKGTYR 591
CQLGC+ FF+ Q ++C LCD+ YA N++V ND E RLECRDGC++A++RCQPGY C G M C PG+YR+ SY ++TC CP G +R
Sbjct: 232 CQLGCTLFFSLRENPKQLSSCLSLCDDKYAYNITVSYNDLMELVRLECRDGCHMALMRCQPGYFCLQPSTTLDDDGKHHLSSTSLPNGGSMHECLPGSYRDVSYHAVDTCVPCPPGRFR 350
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CE24_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 5.890e-18 Identity = 44/84 (52.38%), Postives = 48/84 (57.14%), Query Frame = 1
Query: 346 QNTT--CGGLCDNFYARNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCADGVMSVCSPGTYRNTSYDMINTCTQCPKGTYR 591
QNT C CD Y + + G ND A LEC DGC IA LRCQPGYSC G+M C PGTYR Y + C CPKG YR
Sbjct: 199 QNTLSRCMQRCDYTYRFSDTTGYNDVTMLANLECYDGCQIANLRCQPGYSCFYGMMEKCVPGTYRPNDYHKVEQCFNCPKGRYR 282
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Match: Ephrin_rec_like (domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZJ0_THAOC) HSP 1 Score: 92.0 bits (227), Expect = 6.680e-18 Identity = 65/197 (32.99%), Postives = 86/197 (43.65%), Query Frame = 1
Query: 94 STLFVSATLEQCHLDCAGNTTAELVADAALNGVSWSVWDTQRLVGPTEPASEVNATYPYARAPLP--LPFHSFCQLGCSYFF----AGSPQNTT------CGGLCDN-FYARNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSC------------ADGVMSVCSPGTYRNTSYDMINTCTQCPKGTYRATGKAR 609
S + V AT EQC +DC +D W D P A + YPY A + +FC+LGC+YFF + P++ + C C+ F + + ND ARLECRDGC +A+ RCQPGY C A G M+ C PGTYR+ Y + C CP +R K R
Sbjct: 150 SAVVVLATEEQCRIDCN--------SDDRTPTRPWHEQD------PLRNALRLTRPYPYHAAADDDERDYPAFCRLGCNYFFVPESSDDPEDESKSTLDQCLERCEEEFEYTSTTPPYNDLVAIARLECRDGCLLALRRCQPGYYCSQVSFRDGNGTYAGGQMTPCPPGTYRDVDYGAVEACVPCPPNHFREDVKGR 332 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7814.15985.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7814.15985.1 >prot_E_fasciculatus_S2_contig7814.15985.1 ID=prot_E_fasciculatus_S2_contig7814.15985.1|Name=mRNA_E_fasciculatus_S2_contig7814.15985.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=236bp MNPDGGLLRAFVVPTTLALAWQAWTTMTASNSTLFVSATLEQCHLDCAGNback to top mRNA from alignment at E_fasciculatus_S2_contig7814:5751..7211+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7814.15985.1 ID=mRNA_E_fasciculatus_S2_contig7814.15985.1|Name=mRNA_E_fasciculatus_S2_contig7814.15985.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1461bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7814:5751..7211+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7814:5751..7211+ >mRNA_E_fasciculatus_S2_contig7814.15985.1 ID=mRNA_E_fasciculatus_S2_contig7814.15985.1|Name=mRNA_E_fasciculatus_S2_contig7814.15985.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=708bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7814:5751..7211+ (Ectocarpus fasciculatus EfasUO2)back to top |