mRNA_E_fasciculatus_S2_contig7808.15973.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7808.15973.1 vs.
Match: Gamma-glutamylcyclotransferase (n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFT4_9PHAE) HSP 1 Score: 535 bits (1377), Expect = 1.010e-185 Identity = 278/352 (78.98%), Postives = 294/352 (83.52%), Query Frame = 1
Query: 1 MPLTSRRAPILALFYHAAYSGHRIEAFV--AATPRCRLKLGGVHPQACHHQQAFHLPSIPCLQPMGRRDEVLKQAPAMAMTMGADVAKASAAIKAAQTEPSRSGGILTPLKKSIRNDGDRGDDFDTALLYFAFGANMCPSILTSKRGVKPFASLPAEAMKFSTGTRRTPSATDGAGGVTRRDNIEMAKQKSQGMCVCFCHRAGYATLALSPGPPQLWETSPGAHGVLHAISPSGLEKIAASENGYTKRLVDVETPAGDRDIAVCFVSNPWQTLPTSVPPTSRYLSLLQDGAAYHNVDERYRAWLARLPSVRPEDEAVSSERVCTPSKIVTDTVLGLVGLAALIAAAAAINPF 1050
MPLT RRAPILAL YHAA+SGHRIEAFV AA RC +LGGVH QACHH HL SI L+P+G RDE LK AP+ AMTMGADVAKAS AIKAA TE SRSGGIL PLK+SIRND G+D DTALLYFA+GANMCPSILTSKRGV PFASLPAEA FSTGTRR PSATDG G V RRD + QKS+GMCVCFCHRAGYATLA SPGPPQ WETSPGAHGVLH ISPS LEKIAASENGY KRLVDVETP +RDIAVCFVSNPWQ LP SVPPTSRYLSLLQDGAAYHNVDE YRAWLARLPSVRPEDE +SS+RV TPSKIVTDTVL + AA++AA AA NPF
Sbjct: 1 MPLTGRRAPILALLYHAAHSGHRIEAFVHVAAIRRCWHRLGGVHQQACHHXXXXHLQSILQLKPVGGRDETLKGAPSTAMTMGADVAKASVAIKAAPTESSRSGGILGPLKESIRNDRGGGEDCDTALLYFAYGANMCPSILTSKRGVNPFASLPAEATHFSTGTRRNPSATDGVGRVIRRDKTDA--QKSRGMCVCFCHRAGYATLAHSPGPPQSWETSPGAHGVLHVISPSSLEKIAASENGYEKRLVDVETPTRERDIAVCFVSNPWQALPASVPPTSRYLSLLQDGAAYHNVDEDYRAWLARLPSVRPEDETMSSDRVRTPSKIVTDTVLAVAAFAAVVAAGAATNPF 350
BLAST of mRNA_E_fasciculatus_S2_contig7808.15973.1 vs.
Match: Gamma-glutamylcyclotransferase ((Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RLJ4_9CHLO) HSP 1 Score: 78.6 bits (192), Expect = 5.180e-13 Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 1
Query: 385 FAFGANMCPSILTSKRGVKPFASLPAEAMKFSTGTRRTPSATDGAGGVTRRDNIEMAKQKSQGMCVCFCHRAGYATLALSPGPPQLWETSPGAHGVLHAISPSGLEKIAASENGYTKRLVDVETPAGDRDI-AVCFVSNPWQTLPTSVPPTSRYLSLLQDGAAYHNVDERYRAWLARLPSV 924
FA+GAN+ + ++ RG++P S PA + +G + F HR G+ T+ + + E HGVLH +S + ++AA E+ Y V+ E G I A+ FV+ P + + + +PPTSRYL LLQ GA +D+RY +WL LPS+
Sbjct: 48 FAYGANINRAKVSESRGLRPIESRPA---------------------------------RLRGYKLSFRHRGGFGTVEEAREGDEWREV----HGVLHLLSHADYCRLAAMEHEYRPCEVEAEPYDGGPPIKAIVFVTPPERLIRSGLPPTSRYLGLLQKGAPEWPLDDRYTSWLKSLPSI 191
BLAST of mRNA_E_fasciculatus_S2_contig7808.15973.1 vs.
Match: Poly (polymerase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SB69_9CHLO) HSP 1 Score: 78.6 bits (192), Expect = 8.260e-12 Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 1
Query: 385 FAFGANMCPSILTSKRGVKPFASLPAEAMKFSTGTRRTPSATDGAGGVTRRDNIEMAKQKSQGMCVCFCHRAGYATLALSPGPPQLWETSPGAHGVLHAISPSGLEKIAASENGYTKRLVDVETPAGDRDI-AVCFVSNPWQTLPTSVPPTSRYLSLLQDGAAYHNVDERYRAWLARLPSV 924
FA+GAN+ + ++ RG++P S PA + +G + F HR G+ T+ + + E HGVLH +S + ++AA E+ Y V+ E G I A+ FV+ P + + + +PPTSRYL LLQ GA +D+RY +WL LPS+
Sbjct: 233 FAYGANINRAKVSESRGLRPIESRPA---------------------------------RLRGYKLSFRHRGGFGTVEEAREGDEWREV----HGVLHLLSHADYCRLAAMEHEYRPCEVEAEPYDGGPPIKAIVFVTPPERLIRSGLPPTSRYLGLLQKGAPEWPLDDRYMSWLKSLPSI 376
BLAST of mRNA_E_fasciculatus_S2_contig7808.15973.1 vs.
Match: Gamma-glutamylcyclotransferase (n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TEL4_HETAK) HSP 1 Score: 77.0 bits (188), Expect = 8.910e-12 Identity = 68/220 (30.91%), Postives = 105/220 (47.73%), Query Frame = 1
Query: 382 YFAFGANMCPSILTSKRGVKPFASLPA-------EAMKFSTGTRRTPSAT-DGAGGVTRRDNIEMAKQKSQGMCV--CFCHRAGYATLALSPGPPQLWETSPGAHGVLHAISPSGLE-KIAASENGYTKRLVDVETPAGDRDI--AVCFVSNPWQTLPTSVPPTSRYLSLLQDGAAYHNVDERYRAWLARLPSVRPEDEAVSSERVCTPSKIVTDTVLGL 1002
YF++GANM +L + + P S PA + + FS R AT G+ R + A++ G AT +W+ GAHGVLHA+ ++ +A E+GY R + V+ P G ++ A FVS+P L S+PP++RYLSL++ GA H ++E Y WL + S+ ++ E T S I+ +VLG+
Sbjct: 81 YFSYGANMSRGVLAGRHKISPEFSYPARVKDPDFDVLSFS---HRGGFATLIGSSDPAARGTVSEARRTKVGTTTKEAVAKERAPATREAQ----HVWQ---GAHGVLHAVPLEAVQGTLARVESGYRLRTITVQ-PYGCEELINAKAFVSSPLLKLSQSLPPSTRYLSLIKQGAKEHQLEESYIDWLYSIESIE-HASSMGKEYFETSSNIMA-SVLGV 287
BLAST of mRNA_E_fasciculatus_S2_contig7808.15973.1 vs.
Match: Uncharacterized (protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YWZ7_COCSC) HSP 1 Score: 61.6 bits (148), Expect = 1.640e-7 Identity = 33/81 (40.74%), Postives = 45/81 (55.56%), Query Frame = 1
Query: 697 LEKIAASENGYTKRLVDVETPAGDRDI-AVCFVSNPWQTLPTSVPPTSRYLSLLQDGAAYHNVDERYRAWLARLPSVRPED 936
+ ++ E+ Y VDVE G + A+ F+S P + +PP+ RYL LLQDGA N+D +Y AWL LPSV D
Sbjct: 1 MARLTHMEHEYRPTEVDVEAYDGRPSVRALAFISPPDLLIQEGMPPSDRYLKLLQDGAHEWNLDSKYTAWLDSLPSVHSRD 81
BLAST of mRNA_E_fasciculatus_S2_contig7808.15973.1 vs.
Match: Gamma-glutamylcyclotransferase (n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XP62_9CHLO) HSP 1 Score: 63.9 bits (154), Expect = 3.230e-7 Identity = 72/253 (28.46%), Postives = 99/253 (39.13%), Query Frame = 1
Query: 376 LLYFAFGANMCPSILTSKRGVKPFASLPAEAMKFSTGTRRTPSATDGAGGVTRRDNIEMAKQKSQGMCVCFCHRAGYATLALS-PGPPQLWETSPGAHGVLHAISPSGLEKIAASEN-------GYTKRLVDVETPAGDRDIAVCFVSNPWQTLPT-------------------------SVPPTSRYLSLLQDGAAYHNVDERYRAWL--------ARLPSVRPEDEAVSSERVCTPSKIVTDTVLGLVGL 1011
+LYF++GANM P +LT +R VKP AS P F R G+ + G+AT+ S PG Q HGV+H IS + + I SE GY V G + A ++ P LP +V P+ RYL++LQ+GA YHN+D +Y+AWL + + S A S+ V S + VLG VGL
Sbjct: 60 VLYFSYGANMSPKVLTERRKVKPQASYPGVLHGFVLSFRYP--------GIPYFE-------------------PGFATIERSNPGDRQ------DVHGVIHLISRTEWDTIKQSEGVTSSDQIGYQIVQVACSLYDGSKVTAFTLMTAPPFLLPMQKQRRQDCKIFLGGSNEYGGLGVTGAVQPSKRYLNILQEGAKYHNLDLKYQAWLQTIIPFDRSSIGSTLGGYAAASTAAVAGLSLLPAFWVLGNVGL 279 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7808.15973.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7808.15973.1 >prot_E_fasciculatus_S2_contig7808.15973.1 ID=prot_E_fasciculatus_S2_contig7808.15973.1|Name=mRNA_E_fasciculatus_S2_contig7808.15973.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=351bp MPLTSRRAPILALFYHAAYSGHRIEAFVAATPRCRLKLGGVHPQACHHQQback to top mRNA from alignment at E_fasciculatus_S2_contig7808:2844..6012+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7808.15973.1 ID=mRNA_E_fasciculatus_S2_contig7808.15973.1|Name=mRNA_E_fasciculatus_S2_contig7808.15973.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3169bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7808:2844..6012+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7808:2844..6012+ >mRNA_E_fasciculatus_S2_contig7808.15973.1 ID=mRNA_E_fasciculatus_S2_contig7808.15973.1|Name=mRNA_E_fasciculatus_S2_contig7808.15973.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1053bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7808:2844..6012+ (Ectocarpus fasciculatus EfasUO2)back to top |