mRNA_E_fasciculatus_S2_contig7796.15963.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7796.15963.1
Unique NamemRNA_E_fasciculatus_S2_contig7796.15963.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Match: Protein (SDA1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFB8_ECTSI)

HSP 1 Score: 386 bits (991), Expect = 3.100e-127
Identity = 199/206 (96.60%), Postives = 199/206 (96.60%), Query Frame = 1
Query:   61 MGGMRGSSHKRVPVALKLPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLKDDSEIAAKKSLDIMVVLYRKRVWV 678
            MGGMRGSSHKRVPVALKLPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQ       DKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLKDDSEIAAKKSLDIMVVLYRKRVWV
Sbjct:    1 MGGMRGSSHKRVPVALKLPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQ-------DKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLKDDSEIAAKKSLDIMVVLYRKRVWV 199          
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Match: Protein (SDA1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A4_9STRA)

HSP 1 Score: 266 bits (680), Expect = 8.690e-82
Identity = 129/205 (62.93%), Postives = 169/205 (82.44%), Query Frame = 1
Query:   61 MGGMRGSSHKRVPVALKLPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLKDDSEIAAKKSLDIMVVLYRKRVW 675
            MGG +G+SHKRV + LKLPQLQNL+KRD  GY++EFRQQHRNY+SELEIFKLKP +D++RFAELVTF+SHVAPCYK++ K    +L ALLE+HG ++ P++R+KLVQAL+L+RNRG+L+ T+LL LFF LF  Q       DK LR +L+DH V+DI++IN K RN K+N+T+Q  ++TML+D+SE AAKKSLD+MV LY++RVW
Sbjct:    1 MGGQKGASHKRVELVLKLPQLQNLIKRDAAGYKEEFRQQHRNYMSELEIFKLKPGRDAERFAELVTFLSHVAPCYKEDCKMLPQELMALLEEHGAIIDPALRIKLVQALVLMRNRGLLNSTDLLQLFFKLFRIQ-------DKSLRQLLFDHTVSDIRAINLKARNEKMNRTLQAFMYTMLQDESETAAKKSLDVMVELYKRRVW 198          
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Match: Protein (SDA1 (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367K3F7_RHIST)

HSP 1 Score: 195 bits (496), Expect = 2.720e-59
Identity = 109/207 (52.66%), Postives = 136/207 (65.70%), Query Frame = 1
Query:   76 GSSHKRVPVALKLPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTML-------KDDSEIAAKKSLDIMVVLYRKRVW 675
            G  ++   +   LPQLQNL+KRD + Y  EF QQ R++ S L IF LKP ++S    ELVTFMS VA CY   TK+F   +  LL++H  VLHP +R  LVQALILLRN+G+LD T LL LFF LF C+       DK LR MLY HIVNDIK+ N K +N KLNKT+Q+ +FTML        +++ IAAKKS+D+ V LY K VW
Sbjct:    2 GKRNRAALLPTHLPQLQNLIKRDSKSYEAEFLQQWRHFQSTLSIFCLKPDEESKELCELVTFMSQVAQCYPDITKDFSQSIMDLLKEHCMVLHPEVRKSLVQALILLRNKGILDNTSLLPLFFTLFKCK-------DKHLREMLYSHIVNDIKNSNAKVKNNKLNKTLQSFMFTMLASATAGNSEENAIAAKKSVDVCVDLYHKNVW 201          
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Match: Protein (SDA1 n=1 Tax=Capitella teleta TaxID=283909 RepID=R7T4X4_CAPTE)

HSP 1 Score: 203 bits (517), Expect = 6.890e-58
Identity = 99/188 (52.66%), Postives = 137/188 (72.87%), Query Frame = 1
Query:  112 LPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLKDDSEIAAKKSLDIMVVLYRKRVW 675
            LPQLQNL+KRD E Y+DEF QQ+R+Y S L++F+LKPS  ++   +LV F++ V+ CY +E   F  +L+ +L+QH   + P++RM L QALILLRNRG++ PT LL LFF +F CQ       DK+LR  LY++IV DIK++N+K RN KLN T+QN +FTML+D +  AAK SLD+M+ LYR+ +W
Sbjct:   15 LPQLQNLIKRDPESYKDEFLQQYRHYQSTLQVFQLKPSSQNETLTKLVVFLAQVSSCYPEELANFPQELREMLQQHATTIQPAMRMHLCQALILLRNRGLMSPTSLLELFFQMFRCQ-------DKVLRKTLYNYIVQDIKNVNQKHRNMKLNVTLQNFMFTMLRDSNATAAKMSLDVMIELYRRNIW 195          
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Match: Protein (SDA1 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H927_SPIPD)

HSP 1 Score: 202 bits (515), Expect = 2.980e-57
Identity = 105/192 (54.69%), Postives = 136/192 (70.83%), Query Frame = 1
Query:  100 VALKLPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLKDDSEIAAKKSLDIMVVLYRKRVW 675
            +A  LPQLQNL+KRD   Y+DEF QQ R+Y SEL IF+LKP  ++  F EL+TF+SHVA CY     +F  Q+  LL  +  +L P +R  +VQAL+LLRN+ ++  T LLSLFF LF        A+DK LR +L+ HIVNDIK+ N K +N KLNKT+QN ++TMLKD +EIAAKKSL++M+ LYRK VW
Sbjct:   10 LASNLPQLQNLIKRDPPSYQDEFLQQWRHYESELAIFRLKPDSEAKEFGELITFISHVAQCYTHHCSQFPQQIIDLLSNNYQILEPDLRKTMVQALVLLRNKDLISTTSLLSLFFTLFR-------AKDKQLRSLLHSHIVNDIKNANAKSKNNKLNKTLQNFMYTMLKDSNEIAAKKSLEVMIDLYRKNVW 194          
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Match: Protein (SDA1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507ECA4_9FUNG)

HSP 1 Score: 202 bits (514), Expect = 4.080e-57
Identity = 105/192 (54.69%), Postives = 137/192 (71.35%), Query Frame = 1
Query:  100 VALKLPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLKDDSEIAAKKSLDIMVVLYRKRVW 675
            +A  LPQLQNL+KRD   YRDEF QQ R+Y S+L+IF+ KP  D ++F EL+TF+SHV  CY ++   F  Q+  LL  H  +L P +R  +VQAL+LLRN+ ++  T LLSLFF LF        A+DK LR +L++HIVNDIKS N K +N KLNKT+QN ++TMLKD +EIAAKKSL++M+ LY K VW
Sbjct:   10 LAANLPQLQNLIKRDSRSYRDEFLQQWRHYESKLDIFRDKPDADVEQFGELITFISHVTHCYLEDCAAFPQQIVDLLSTHYQILEPDLRRTMVQALVLLRNKDLITTTSLLSLFFTLFR-------AKDKQLRSLLHNHIVNDIKSANAKSKNNKLNKTLQNFMYTMLKDSNEIAAKKSLEVMIDLYGKNVW 194          
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Match: Protein (SDA1 n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WCL3_9FUNG)

HSP 1 Score: 201 bits (510), Expect = 6.560e-57
Identity = 103/192 (53.65%), Postives = 135/192 (70.31%), Query Frame = 1
Query:  100 VALKLPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLKDDSEIAAKKSLDIMVVLYRKRVW 675
            +A  LPQLQNL+KRD   Y+DEF QQ R+Y S   IF LKP  + ++F EL+TF+SHV+  Y KE  EF  Q+ ++L  H   L P +R  +VQAL+L+RN+  +  T LLSLFF LF C+       DK LR ML+ HIVNDIK+ N K +N KLNKT+QN ++TMLKDD++IAAKKS+++MV LY+K VW
Sbjct:   10 LASNLPQLQNLIKRDPSSYKDEFLQQWRHYESAFTIFNLKPDHEDEKFGELITFISHVSLSYPKECTEFPQQIVSMLSAHHQTLSPELRKTMVQALVLMRNKDQISATSLLSLFFTLFRCK-------DKHLRSMLHKHIVNDIKNCNAKSKNNKLNKTLQNFMYTMLKDDNDIAAKKSIEVMVDLYKKNVW 194          
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Match: protein (SDA1 homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C96A)

HSP 1 Score: 199 bits (507), Expect = 1.630e-56
Identity = 101/188 (53.72%), Postives = 137/188 (72.87%), Query Frame = 1
Query:  112 LPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLKDDSEIAAKKSLDIMVVLYRKRVW 675
            LPQLQNL+KRD   Y+DEF QQ+R+Y S L+IF+LKPS+ S    EL+ F++ ++ CY  E  EF  QLK LL++H  VL P++R+ LV+ALILLRN+ ++  T +L LFF LF CQ       DK+LR  LY +IVNDIK++N K +N KLNKT+QN ++TML+D + +AAK SLD+M+ LYR+ VW
Sbjct:   13 LPQLQNLIKRDPGSYKDEFLQQYRHYESNLQIFQLKPSQYSKTLDELIMFLAQISQCYSAELSEFPQQLKELLQRHSTVLDPTMRLCLVKALILLRNKNLMAATSVLELFFQLFRCQ-------DKVLRKTLYSYIVNDIKNVNSKHKNVKLNKTLQNFMYTMLRDSNAVAAKMSLDVMIELYRRNVW 193          
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Match: Protein (SDA1 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068S1K7_9FUNG)

HSP 1 Score: 200 bits (509), Expect = 1.800e-56
Identity = 108/207 (52.17%), Postives = 141/207 (68.12%), Query Frame = 1
Query:   76 GSSHKRVPVALKLPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLK-------DDSEIAAKKSLDIMVVLYRKRVW 675
            G  ++   +  +LPQLQNL+KRD + Y  EF QQ+R+Y S L IF LKP +++   +ELVTF+S V+ CY KET EF  QL  LL+QH  VLHP +R   VQALILLRNRGV+D T LL LFF LF C+       DK LR MLY+HIVNDIK+ N K +N KLNKT+Q+ +FT+L+       D++ ++AKK +D+ + LY K VW
Sbjct:    2 GKRNRAALLPTQLPQLQNLIKRDAKSYEQEFLQQYRHYQSTLSIFCLKPDEEAKELSELVTFISQVSVCYPKETAEFPQQLVDLLQQHCVVLHPDVRKSFVQALILLRNRGVIDNTRLLPLFFTLFKCR-------DKPLREMLYNHIVNDIKNANLKAKNNKLNKTLQSYMFTILESVKTGNSDENAVSAKKGVDVCIELYHKNVW 201          
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Match: Protein (SDA1 n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S172_9FUNG)

HSP 1 Score: 200 bits (508), Expect = 2.640e-56
Identity = 109/207 (52.66%), Postives = 142/207 (68.60%), Query Frame = 1
Query:   76 GSSHKRVPVALKLPQLQNLVKRDKEGYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETKEFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGLFHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLK-------DDSEIAAKKSLDIMVVLYRKRVW 675
            G  ++   +   LPQLQNL+KRD + Y  EF+QQ+R+Y S L IF LKPS+++   +ELVTF+S VA CY  ETKEF  QL  LL+QH  VL+P +R   VQALILLRN+GVLD T LL LFF LF C+       DK LR +LY HIVNDIK+ N K +N KLN+++Q+ +FTML+       D++ +AAKKS+D+ + LY K VW
Sbjct:    2 GKRNRAAFLPTHLPQLQNLIKRDSKSYEAEFQQQYRHYQSTLSIFCLKPSEEAKELSELVTFISQVAQCYPTETKEFPQQLVDLLQQHCVVLNPDVRKSFVQALILLRNKGVLDNTRLLPLFFTLFKCK-------DKHLRELLYSHIVNDIKNANIKAKNNKLNRSLQSFMFTMLESVKTGNSDENAVAAKKSVDVCIDLYHKNVW 201          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7796.15963.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein3.100e-12796.60SDA1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFB8_EC... [more]
Protein8.690e-8262.93SDA1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0... [more]
Protein2.720e-5952.66SDA1 (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=... [more]
Protein6.890e-5852.66SDA1 n=1 Tax=Capitella teleta TaxID=283909 RepID=R... [more]
Protein2.980e-5754.69SDA1 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0... [more]
Protein4.080e-5754.69SDA1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepI... [more]
Protein6.560e-5753.65SDA1 n=1 Tax=Blyttiomyces helicus TaxID=388810 Rep... [more]
protein1.630e-5653.72SDA1 homolog n=1 Tax=Gigantopelta aegis TaxID=1735... [more]
Protein1.800e-5652.17SDA1 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068... [more]
Protein2.640e-5652.66SDA1 n=1 Tax=Mucor circinatus TaxID=2054153 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7796contigE_fasciculatus_S2_contig7796:2921..6986 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score385.2
Seed ortholog evalue2.1e-104
Seed eggNOG ortholog2880.D8LFB8
Preferred nameSDAD1
Model size679
KEGG koko:K14856
Hectar predicted targeting categoryother localisation
GOsGO:0000054,GO:0000055,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006403,GO:0006405,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007089,GO:0007346,GO:0008104,GO:0008150,GO:0009987,GO:0010033,GO:0010564,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0022613,GO:0030029,GO:0030036,GO:0031503,GO:0031974,GO:0031981,GO:0033036,GO:0033750,GO:0034097,GO:0034613,GO:0042221,GO:0042254,GO:0042273,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0045787,GO:0045931,GO:0046907,GO:0048518,GO:0048522,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051716,GO:0051726,GO:0065007,GO:0070013,GO:0070727,GO:0070887,GO:0071166,GO:0071310,GO:0071345,GO:0071426,GO:0071428,GO:0071702,GO:0071705,GO:0071840,GO:0090068,GO:1900087,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902806,GO:1902808,GO:1990823,GO:1990830,GO:2000045
Exons6
EggNOG free text desc.ribosomal large subunit export from nucleus
EggNOG OGsKOG2229@1,KOG2229@2759
Cds size678
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7796.15963.1prot_E_fasciculatus_S2_contig7796.15963.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7796 2921..6986 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842441.2608633-CDS-E_fasciculatus_S2_contig7796:2920..30461696842441.2608633-CDS-E_fasciculatus_S2_contig7796:2920..3046Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7796 2921..3046 +
1696842441.2732444-CDS-E_fasciculatus_S2_contig7796:3741..38341696842441.2732444-CDS-E_fasciculatus_S2_contig7796:3741..3834Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7796 3742..3834 +
1696842441.2827015-CDS-E_fasciculatus_S2_contig7796:4272..44041696842441.2827015-CDS-E_fasciculatus_S2_contig7796:4272..4404Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7796 4273..4404 +
1696842441.292782-CDS-E_fasciculatus_S2_contig7796:4646..47781696842441.292782-CDS-E_fasciculatus_S2_contig7796:4646..4778Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7796 4647..4778 +
1696842441.3033798-CDS-E_fasciculatus_S2_contig7796:6233..63141696842441.3033798-CDS-E_fasciculatus_S2_contig7796:6233..6314Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7796 6234..6314 +
1696842441.313666-CDS-E_fasciculatus_S2_contig7796:6872..69861696842441.313666-CDS-E_fasciculatus_S2_contig7796:6872..6986Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7796 6873..6986 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7796.15963.1

>prot_E_fasciculatus_S2_contig7796.15963.1 ID=prot_E_fasciculatus_S2_contig7796.15963.1|Name=mRNA_E_fasciculatus_S2_contig7796.15963.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=226bp
HHRRTWVLAAGCHGRPHTTTMGGMRGSSHKRVPVALKLPQLQNLVKRDKE
GYRDEFRQQHRNYLSELEIFKLKPSKDSDRFAELVTFMSHVAPCYKKETK
EFGPQLKALLEQHGPVLHPSIRMKLVQALILLRNRGVLDPTELLSLFFGL
FHCQARKKHAQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTM
LKDDSEIAAKKSLDIMVVLYRKRVWV
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mRNA from alignment at E_fasciculatus_S2_contig7796:2921..6986+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7796.15963.1 ID=mRNA_E_fasciculatus_S2_contig7796.15963.1|Name=mRNA_E_fasciculatus_S2_contig7796.15963.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4066bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7796:2921..6986+ (Ectocarpus fasciculatus EfasUO2)
CACCACCGTCGTACCTGGGTGCTTGCAGCAGGGTGCCACGGCAGGCCGCA CACCACTACGATGGGGGGAATGCGGGGATCGAGCCATAAGAGGGTGCCGG TGGCGTTGAAGCTCCCGCAGCTGCAGGTCAGTGACCGAGATTTTCGTCCC TGCTGACAAGCCAGTCACCATTCATGCCTCTAATCTCTATTTGAAGGCAT CGACGTGTGCACCTCTTTATGTACGAGGAGCACGCCACCCATGCTAGAAA GCTCGCACCTACGCAACAGTCCACGGTGGTGGAGCGATGTTCTCTCGCCG GCTGTTGCCGTCTTCTCTATCCCATGTGTGCATTTAGTCTAGTGTTGACC AAAAACAATCGCCAATGTCGGAGAGAATTTGAGTTGAAAAAAAACTCGTG TGTTGCTGCTGCTGTGGTGCCGCAGCAACCAACCACCCCAAGAACGAAAG CACACCAAAAAGACAACAAGAGGATTAGGCGCTTTGGCGGCTGCCTAGGC GGTTGGGGCTGATGTACGAGCCGAGCGTGGGAGCATGCACGTTTGGCTCT CGCTTTCAGTTGTTGTGTCGGAAATACATGTCGAACGGACACCACACCCT GAGACCGGCAGCCGGCAGCCGATTCCTGTGTTCTAGAGAGAGAAATCCGC CGCACTGCTGTGTACACAACCGACCATACACATGAAAATTTGTAGCGACG CACCTGTTCACGAGTCAACCGTGGCACATGGTTTCCCCAGTCATGGCAAA CGATTGGTAGTAGCGTCGGAAATGTCGTGGACTTTAATCGTGGACCTATC TTGTTTGTGTTTTGTGTCCAGAACCTGGTCAAGCGGGACAAGGAAGGGTA CAGAGACGAGTTCCGGCAGCAGCATCGAAACTACCTGTCCGAGCTGGAGA TCTTCAAGCTGAAGGTTGGTGACATGTTTTTCTTGTTGGCATCGCGACAG CGCGCCGACGCGCAATGACCAAATGACCAGACGGCAAAGTTGTTTTTGAA ACCTATCGAATAACTACACGTGTTGCATACAGCAGTTAAATTTCGAAGCA GCGGTAATGAGAGGGATATTGCCTATGAGCGGCCCCTCGCTGCAAGGAGA GCTGCGGGTGGCATGTTTGCGCGACGGCGGTGCTCATGCGATGGGGAAGC GGAGAAGCAGAGATCAGTCGAATGGGAGACCGTCCGGTGGATGCCTTGCG CACGCGCGTCGCCACTTAAAAATGCAGTGCTGCTGTGTCCCCCTGGTGGT GAGCGGCGAAGTGTGTGCCGCCGCTCGTTTCCACAAGTCTTGTCCTCAGA CACAACAAAGACAACGCCCGCCCTTTTGTATGTATCATGCCTGCACCACC AGCCCTCAAAGGATAGCGACCGGTTCGCCGAGCTGGTGACGTTCATGAGC CACGTGGCCCCCTGCTACAAGAAGGAGACGAAGGAGTTCGGGCCTCAGCT CAAGGCTCTGCTGGAGCAGCACGGCCCGGTACTGGTGAGTGATCTCCGTG ACTGGAGATAAGAATACTTGTGCATACGAGGGATTGTTGATCCATCCTGT TGTGTGCTTTTCCAGCGGTAGACTTGACGATCTACGATTCGGGTTTAGAT TATCTGTGCTGTGGTGTGCATTCTCCAGCGGTAGACTTGAGAGCCTCGTG GCAGGGTTTGGAATATCTGTCCTTATGCCCCGGCCTTGCCTCGTCTCTCT CGCACGCGGGCGCTATGTACGCGCAGCACCCCTCCATCCGGATGAAGCTG GTGCAGGCGCTCATTCTGCTGCGCAACCGCGGCGTGCTGGACCCCACGGA GCTGCTCAGCCTCTTCTTCGGCCTGTTTCACTGTCAGGCGAGAAAAAAAC ACGCACAAGTGTAATCGGAATACTTCCAGCTGAGACCCAAAACCGGGATC TATACAAAAGGCAGATACGAGATCATCGAAGCAGAGGGTTCACTGTATGC ATCGACAACCACAACATGCAGACAAGAAAGCACCGCGCTATGGATTATGT AATCCAGAGGCGAGAAAAAAAACAAATGCTCTGCACCAGCTCCCCTGTTG CCGGTGGTGGTGTGGTGATCTTTTCATGGCGGCGTTGAGACAGCTCACAA CAAATCTCAGTTGTACCACTACAGTAGCGGAACACCGCTAGCGTCCCTTG TATACTGTCAAAGTAGGAAGCTGCAGTGTTTTGTCGTTTCGTTGCTGCTT GAATGTCAGGACTACGACATCGACACCCTAAGTATCCATTCTCGGATCGC TTTTGTCTTCGAATATTTTCAGTTCCACCCTTTTTTTCAGACCAGGTGGT GGTGCAGCAGATCATCCTCAACGTGGTACAGGCAAACAAACAGACAACCG GCAAGATCGTGATTTACTACGACATCGACGGCGTCGACAGGCCTGTCGAC GCCGTCGATGTCGTGGTAAATCACGATCTTGTCGGTTTTCTGTTTGTTTG CCTGTACCACGTTGAGGATGATCTGCTGCACCACCACCTGGTCTGAAAAA AAGGGTGCCCTGTCGACGCCGTCGATGTCGTAGTAAATGACGATCTTGCC GGTTTTCTGTTTGTTTGCCTGTACCACGTTGAGGATGATCTGCTGCACCA CCACCTGGTCTGAAAAAAAGGGTGGAACTGAAAATATTTGAAGACAAAAG CGATCCGAGAATGGATACTTAGGGTGTGAAAAGTGTTCTAAAATTCAAGT AGAATGGAAACGAAAACACGCTACAGATATTCGTTGATGCAGAATACACC GCCAACAGAGAGAGTTACCAAACGACATCTGACAATTGCTGGATTGATTA CCTTCTGTCGCGAGCTCTGTTGCGGGAGGGATCGTAGTGGGACGGGGCGT CTGAGGAATGTCGTGAATGCTGAACCTCATGTCTAGACATGAAATGCTGT TGATGACGTAGATTAGTTGAGGTTATAGGCGGTAAAACTAGATAACCGTG GATGTGGGCTCGCCTTGCGCGTGGTATTGCGGCACTGCTGTTTTTGTGGA GATGAGAACGGTGTGACCAGTGTTTTAGTGTGTTTGGTCGTTCCGTTGGT CCGAGGTAATGGCCACTCTACAGGCAATGACGGGACGTTAAATCACAAGC GATGCCGCAAACCATCAGCCTTCGGGCATCTGTTGACCGTCGAGGCTAGC GTAGTGTCATATGACAATGGAACGGGTTGTGTGGACCCTGCTAAGCCATG ACTTGAGGAAATGTCAGCTGCGCTGCTGCTCTGGTTCCTGGTGTACCCCC CTACCCTCCTCTCACGCCCCCCACCCTGCCCCGGCCCTACCCTGCTCCCC TTGCTCGACACAGGACAAGATGCTGCGTGTCATGCTGTACGACCACATCG TGAACGACATCAAGTCTATCAACGAGAAGGGCAGGAACCCGAAGGTGTGT GCACGTGTACCCTTTCCTGTCGACACGTGGCAAGTGTGTGTACCCTTTTC TGCCTACACGTGGCAAGCGCTTGGTTCGCGCCAACTGATCGGTTTTTACT AGTGATGAAAAAGACGCCAGTCCCAGAGGCACAGAGAACAGAAACGCTTT CGTGTGTTGCGGTCTGCTGGCGTTATCATTTGGCGCGTCCGTGGACCATA TGCATGTTTTTCGCTTGAGGCTCGCCGTGGGGAAGAGGAGTACAAGCGCG CCTCGCCGCAACAGAGATACCATTCACCCCGATAGCGCCGCTCTTCGGCA CGCGTTTGTTGCTGAGAGCAGGTTCCGAGTCTCGTCTCGCTTCTCTGCTT GGTCTATTCAGAAGAGAGCTTGTAACCCCCCTCCCCGCCGAGTCTCATCC GGTAGAAACCCGGCGTCACAGGGATGCGAGTCCGTGGTAACGACTACGAT GTGCGAATCACGATTATATATTTTGAAGCCCTTCCCTTCGCACCCACCCG CCCTCCTTCCCCCTCCCGTATGCTCACTCCATGTTTTTGGCGCGAACAAA AGCTCAACAAAACTATACAGAACCTGGTGTTCACGATGCTCAAGGACGAC AGCGAGATCGCCGCCAAGAAGTCTCTGGACATCATGGTTGTTCTCTACCG GAAGAGAGTATGGGTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7796:2921..6986+

>mRNA_E_fasciculatus_S2_contig7796.15963.1 ID=mRNA_E_fasciculatus_S2_contig7796.15963.1|Name=mRNA_E_fasciculatus_S2_contig7796.15963.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=678bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7796:2921..6986+ (Ectocarpus fasciculatus EfasUO2)
CACCACCGTCGTACCTGGGTGCTTGCAGCAGGGTGCCACGGCAGGCCGCA
CACCACTACGATGGGGGGAATGCGGGGATCGAGCCATAAGAGGGTGCCGG
TGGCGTTGAAGCTCCCGCAGCTGCAGAACCTGGTCAAGCGGGACAAGGAA
GGGTACAGAGACGAGTTCCGGCAGCAGCATCGAAACTACCTGTCCGAGCT
GGAGATCTTCAAGCTGAAGCCCTCAAAGGATAGCGACCGGTTCGCCGAGC
TGGTGACGTTCATGAGCCACGTGGCCCCCTGCTACAAGAAGGAGACGAAG
GAGTTCGGGCCTCAGCTCAAGGCTCTGCTGGAGCAGCACGGCCCGGTACT
GCACCCCTCCATCCGGATGAAGCTGGTGCAGGCGCTCATTCTGCTGCGCA
ACCGCGGCGTGCTGGACCCCACGGAGCTGCTCAGCCTCTTCTTCGGCCTG
TTTCACTGTCAGGCGAGAAAAAAACACGCACAAGACAAGATGCTGCGTGT
CATGCTGTACGACCACATCGTGAACGACATCAAGTCTATCAACGAGAAGG
GCAGGAACCCGAAGCTCAACAAAACTATACAGAACCTGGTGTTCACGATG
CTCAAGGACGACAGCGAGATCGCCGCCAAGAAGTCTCTGGACATCATGGT
TGTTCTCTACCGGAAGAGAGTATGGGTG
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