mRNA_E_fasciculatus_S2_contig7793.15959.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE) HSP 1 Score: 372 bits (955), Expect = 2.420e-112 Identity = 224/506 (44.27%), Postives = 295/506 (58.30%), Query Frame = 1
Query: 1639 LPVAVETKLADFGAALTGALITNNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGVVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFQGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFSVVGGVARAIFNELKFVQVKDGIEDAVNKLSLATLREAVSLLTSS-DRLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAQKGRRSLLDFAGAAIDNKDVARMFGGGSVVGSLFEHAAHQVIGWDRAGEEPLKMAILIDSGG----VLSGTDSLNFSFEKREGFKGETIYSSFDQGVYYTAVPLNYPAIDSFGMDRRGDTLFFFQMKYAGV------KAVIGGAVERYWRTAS--KGSVSVKNCVYVYVVPEEPQWRLQAIKSAGIDEVR-KLLSEASDDFLSACAVCVVAIP 3114
L VAV LADFGA LT A++ +NTLEL +GTFFLG P L SKLFIR CYK+LS LIL G + T IVVTGTPGIGKS FGFYL+YLLR QG TVV E K W+RFS GV +F GY+ ++WYLSDPEDRP+E TVVL+SP+ RV EF+K +++ +MP W LDEL +C++AVFPHVP T V E FS VGGVARA+F+ K QV ++ A + + L L++ +S D++ TD +GD L H+L GF+ ++V FAS F + + ++ +K L F GAA + ++ G FE AH+ IG + ++ M IL + VL G + L SF K + F+G + + G YY N+ A DSFG+D TL+FFQ+K AG+ KAV VE+YWR A G+ K VY +VVPE W +A ++ D R +D F SAC VCV+ +P
Sbjct: 32 LLVAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNSTWYLSDPEDRPKELLGLPTVVLLSPRKSRVNEFMKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETDVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAERAAG--FETIAHKTIG-GASEQQWFDMRILSRASSSTKSVLEG-NRLRLSFVKEQSFEGNSFPDALVAGTYYRPGSPNFAAADSFGVDSGSKTLWFFQVKSAGLPPKEGEKAVKWTHVEKYWRRAKLHHGAPIKKRFVYAFVVPEGKVWN-KATETCEEDGGRGDWRRNVTDGFKSACDVCVIEMP 532
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q5_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.260e-41 Identity = 134/456 (29.39%), Postives = 211/456 (46.27%), Query Frame = 1
Query: 1654 ETKLADFGAALTGALITNNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGVVQA-SLEAFNERGYMDDPNSWYLSDP--EDRPREYFQGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFSVVGGVARAIFNELKFVQVKDGIEDAVNKLSLATLREAVSLLTSSDRLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAQKGRRSLLDFAGAAIDNKDVARMFGGGSVVGSLFEHAAHQVIGWDRAGE----EPLKMAILIDSGGVLSGTDSLNFSFEKREGFKGETIYSSFDQGVYYTAVPLNYPAIDSFGMDRRGDTLFFFQMKYAGVKAVIGGAVERYWRTASKGSVSVK-NCVYVYVVPEE 2997
+ + F AL+ A ++ L L +GT+F+G G++++IRSCY+EL I +S T +V+TGTPGIGKS + Y L+ LR G TVV+++ +YRFS V A ++ AF G + P+ W+L DP + P G T+V VSP ER K FLK A +MPVW +E+ +C++ +F HVP + V++ GGV R + + ++ A+ K + A LR + L D T DK+ H+ + F + +AS + + + + + L F ++ AR+ ++ G +FE H+++G E EP + G + NF+F + F ++GVYY N A DSF + LF FQ+ A V A S+ + V +VVP +
Sbjct: 80 RSSVVTFWRALSRASDDDDCLALKDGTWFMGDYVRGNRIYIRSCYRELMDTIKAMVTSGT-RRVVITGTPGIGKSCYALYWLWHLRRAGNTVVYQIGADFYRFSGELVQHADTIGAFKNAGGLWHPDVWFLCDPARDHEPYGGCLGVTLVFVSPSTERYKAFLKEPRATTRYMPVWSQEEVQRCRQLLFDHVPQSRVQDLLEQWGGVPRFVLQFADDDTQQAKLQQAIRKCATAGLRATI-LNAGEDAGSTAALSDKVLHMC---TADFVHVRLMWASQYAFDALCEAQGEASKGELRAFIASS------ARLPSLATLRGLVFEPYVHRLLGNGSCFEYRVLEPAQ-----------HGVTTFNFAFRRSVTFARLRDIWRIEEGVYYAPRASNLSAGDSFAII--DGVLFIFQITVAAEHGVKKAGTLDIVEAACGMSIGARPEFVLAFVVPPD 511
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE) HSP 1 Score: 156 bits (395), Expect = 1.060e-40 Identity = 78/113 (69.03%), Postives = 86/113 (76.11%), Query Frame = 1
Query: 1639 LPVAVETKLADFGAALTGALITNNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGV 1977
LPVAV LADFGA LT A++ +NTLEL +GTFFLG P L SKLFIR CYK+LS LIL G + T IVVTGTPGIGKS FGFYL+YLLR QG TVV E KG W+RFS GV
Sbjct: 13 LPVAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGV 125
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Match: Uncharacterized (protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UD55_9GLOM) HSP 1 Score: 154 bits (389), Expect = 6.260e-36 Identity = 101/342 (29.53%), Postives = 169/342 (49.42%), Query Frame = 1
Query: 1654 ETKLADFGAALTGALITNNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFE-------LKGKWYRFSYAGVVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFQGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFSVVGGVARAIFNELKFVQVKDGIEDAVNKLSLATLREAVSLLTSSD------RLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAQKGRRSLLDFAGAAIDNKDVARMFGGGSVVGSLFEHAAHQVI 2640
E L F L A I NN L+L +GT+FLG G+ L+IR CY L+ +I ++ + +TG PGIGK+ FG+YLLYLL+ Q KT+V+ L K Y F + FNE Y+D+ + WY+ D +P T++ SP+ + KEF K+ FMP W +E+ +C+ +F H+ VE+ +S GG+ R +F + ++ +E+A+NK + L + + D + T++ G++ D + + FAS + +E VI K + + L +F A+ + + + ++ G +FE AH+++
Sbjct: 33 EKDLGKFWCFLENAKIDNNFLQLPDGTYFLGDKKQGTILYIRKCYLHLADIIF----NEKINRCRITGNPGIGKTFFGYYLLYLLQKQNKTIVYHKARQYPILFNKQYTFRSDNIFD-----FNE--YLDNTDVWYIVD--GQPPLEVHAKTILFCSPQKQHYKEFDKMIGTSIRFMPAWSWNEINECRIGIFNHLEIAKVEDLYSRWGGIPRFVFEKALDSSQQNHLEEAINKCNTRLLDFVGEIDHADDISHRIVHIHTNLPGEE--EEKEDEETHYVNKFILFASEWVAEKVIDKFEKSYNQQLKNFVTASSSDNEYS------TLRGVIFEQIAHRIL 353
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN6_9STRA) HSP 1 Score: 150 bits (380), Expect = 8.420e-36 Identity = 93/259 (35.91%), Postives = 133/259 (51.35%), Query Frame = 1
Query: 1672 FGAALTGALI-TNNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGVVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFQGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFP------HVPSTFVEEAFSVVGGVARAIFNELKFVQVKDGIEDAVNKLSLATLREAVSLLTSSDRLPTDITGDKLFHV 2427
F AL+ A + + L+L GT+F+G+ GS ++IR CY L I ++ +V+TGTPGIGK+ + FY L+ LR G+TVV++L WYRF A VQ S +AF GY+DDP + F G T+V V+P++ R EFLK A + FMPVW +ELL+C +F VP V E F GGV R + + + + A++ S+ L A+ T T + DKL H+
Sbjct: 1 FWRALSSASVDADGCLKLPAGTWFMGNRDFGSAIYIRDCYCNLMEQINKLVAARRVQRVVITGTPGIGKTCYAFYWLWHLRQTGRTVVYQLGPGWYRFCGATAVQGSRKAFLAAGYLDDPAAXXXXXX----XXXFGGITLVFVTPRWVRYHEFLKAPAATKRFMPVWSEEELLRCAELLFSGQDLERDVPQARVRELFRRWGGVPRYVLQYAHDDERQGTLTAAIHHCSVGDLHAAIRS-TGEGTGTTVVLSDKLVHI 254
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Match: Uncharacterized (protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UC44_9GLOM) HSP 1 Score: 145 bits (367), Expect = 6.660e-33 Identity = 92/335 (27.46%), Postives = 168/335 (50.15%), Query Frame = 1
Query: 1654 ETKLADFGAALTGALITNNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGVVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFQGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFSVVGGVARAIFNELKFVQVKDGIEDAVNKLSLATLREAVSLLTSSD------RLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAQKGRRSLLDFAGAAIDNKDVARMFGGGSVVGSLFEHAAHQVI 2640
E L F + L A I NN L+L +GT+FLG GS L+IR CY L+ +I + +TG PGIGK+ FG+YLLY L Q KT+V+ ++ +S + F+ Y+++ + WY+ D +P + T++ SP+ + KEF K+ + FMP+W +E+ +C+ +F H+ VE+ +S GG+ R + + ++ +E+A++K + L + + D + T++ G++ + D + + + FAS + +E V+ K + + L +F A++ + ++ G +FE AH+++
Sbjct: 75 EKDLGKFWSFLKNAKIDNNFLQLPDGTYFLGDKKQGSILYIRKCYLHLADIIF----KEKMRRCRITGNPGIGKTFFGYYLLYFLSKQNKTIVYHKACQFPILFNKQNTFSSDKIFDFYEYLNNRDVWYIVD--GQPPLEVRAKTILFCSPQKQHYKEFDKMVGTEIRFMPIWSWNEINECRIGMFNHLEIAKVEDLYSCWGGIPRFVLENALYSSQQNQLEEAISKCNNRLLDFVGEINHADDISHRIVHIHTNLPGEEEEN--EDEETHYIKKFLLFASEWVAEKVMDKFERNYNQLLRNFVTASLFENEY------NTLQGVIFERIAHRIL 395
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Match: Crinkler ((CRN) family protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NWG9_PHYIT) HSP 1 Score: 140 bits (354), Expect = 1.520e-31 Identity = 97/288 (33.68%), Postives = 151/288 (52.43%), Query Frame = 1
Query: 1714 LELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFH--NIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAG--VVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFQGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFSVVGGVARAIFNELKFVQVKDG---IEDAVNKLSLATLREAVSLLTSSDRLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAQKGRRSLLDFAGAA 2556
+EL T+ LG +LGS+++IR CY L L L + + ++V+ GTPGIGK+ FGF ++ +L G TVV+E G RF +A V Q S E F +D P ++Y+ D +P Y+ T++L SP+ EF K + Q +MPVW L E+L+C++ ++ P V++ F GG+AR + L+F QV D +E A + + L L +A S L ++D +L H S F FAS + + V ++ +K +R LL+F A+
Sbjct: 168 VELPRDTYLLGDSTLGSRIYIRHCYPALWELCLERIRDEKTNTPHLVILGTPGIGKTFFGFVIVLILARAGATVVYESGGLKKRFLFAHNVVAQGSQEDFVR--ILDQPTTYYIVDAV-KPA-YYPAKTILLTSPRRSIWYEFNK-TNCQSCYMPVWSLKEILQCRKLMYSDTPMAVVQDCFRRWGGIARYV---LRFSQVGDQQVLLEKATDTVDLDWLVKACSQLDANDAQ----VSHRLLHYR--VSKAFDSEYFAFASQYVQQAVYNRLYKKDKRKLLEFIAAS 441
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Match: Crinkler ((CRN) family protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N885_PHYIT) HSP 1 Score: 139 bits (351), Expect = 3.220e-31 Identity = 99/289 (34.26%), Postives = 152/289 (52.60%), Query Frame = 1
Query: 1714 LELVNGTFFLGSPSLGSKLFIRSCYKELSALI---LGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAG--VVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFQGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFSVVGGVARAIFNELKFVQVKDG---IEDAVNKLSLATLREAVSLLTSSDRLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAQKGRRSLLDFAGAA 2556
+EL T+ LG +LGS+++IR CY L L + +T H +V+ GTPGIGK+ FGF ++ +L G TVV+E G RF +A V Q S E F +D P ++Y+ D +P Y+ T++L SP+ EF K + Q +MPVW L E+L+C++ ++ P V++ F GG+AR + L+F QV D +E A+N ++L L A S L ++D +L H S F FAS + + V ++ +K +R LL+F A+
Sbjct: 172 VELPRDTYLLGDSTLGSRIYIRHCYPALWKLCHERIHDEKKNTPH-LVILGTPGIGKTFFGFVIVLILARAGATVVYESGGLKKRFLFAHNVVAQGSQEDFVH--ILDQPTTYYIVDAV-KPA-YYPAKTILLTSPRRSIWYEFNK-TNCQSCYMPVWSLKEILQCRKLMYSDTPVDVVQKCFRRWGGIARYV---LRFSQVGDQQVLLEKAMNIVNLDWLVNACSQLDANDAQ----VSHRLLHYR--VSKAFDSEYFAFASQYVQQAVYNRLYKKDKRKLLEFIAAS 445
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Match: CRN125_11 (protein (Fragment) n=1 Tax=Phytophthora capsici TaxID=4784 RepID=A0A8A1V4H4_PHYCP) HSP 1 Score: 136 bits (343), Expect = 4.000e-30 Identity = 104/356 (29.21%), Postives = 171/356 (48.03%), Query Frame = 1
Query: 1516 IQTPMQTPVCDVVPSADFCASSAEQNITHVSSVMDGPIFFPLPVAVETKLADFGAALTGALITNNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFH--NIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELK--GKWYRFSYAGVVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFQGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFSVVGGVARAIFNELKFVQVKDGIEDAVNKLSLATLREAVSLLTSSDRLPTDITGDKLFHVLSDSSDGFKRYTVT---------FASNFTSELVIRKIAQKGRRSLLDF 2544
++ PM+ P + F S + T S D P A++ +F A + L L GTF LG+P LGS+++IR CY L + L + + + ++V+ G PGIGK+ FG+ +L+LL G TVV+E + + + FS VVQ S + F E ++ ++Y+ D + PR Y+ T++L SP+ E EF K D + +MPVW DE+L C+ ++ +P + V++ F GG+ R + + + +E A+ ++L +L +A GD L+ S+ S Y VT FAS + E V R++ ++ LL+F
Sbjct: 108 VKAPMRLPTIHQLHYRHFTVGSVDIR-TKKSMTFDPPPLVRFWRALQGDRTEFKA--------DAVLTLPEGTFLLGNPMLGSRIYIRHCYPRLWQVCLKMINDEAMNTPHLVILGNPGIGKTYFGYVILWLLARSGNTVVYESRVCHRRFLFSQDMVVQGSKKDFIE--ILEQTTTYYVVDGVE-PR-YYSAKTILLTSPQREVWYEFNK-DDCRSCYMPVWSRDEVLTCRELMYSDIPESVVQDCFRRWGGIPRYVLHYATAGGRQQWLEKAMENITLDSLMDAC--------------GD-LYENPSEESLHLLHYRVTKEFNTDYFDFASQYVLEEVYRRLYNHNKKKLLEF 434
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Match: Crinkler (domain-containing protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372Q6T8_9GLOM) HSP 1 Score: 139 bits (349), Expect = 6.280e-30 Identity = 125/482 (25.93%), Postives = 213/482 (44.19%), Query Frame = 1
Query: 1648 AVETKLADFGAALTGALITNNT--LELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSY---AGVVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFQGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFSVVGGVARAI---------------------FNELKFVQVKDGIEDAVNKLSLATLREAVSLLTSSDRLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAQKGRRSLLDFAGAAIDNKDVARMFGGG---SVVGSLFEHAAHQVIGWDRAGEEPLKMAILIDSGGVLSGTDSLNFSFEKREGFKGETIYSSFDQGVYYTAVPLNYPAIDSFGMDR---RGDTLFFFQMKYAGVKAVIGGAVERYWRTASKGSVSVKNCVYVYVVPEE 2997
+ + L+ F G+ I+ N LEL G FLG + S LFIRSCY+ L ++L SS N+++TG PGIGK+ FG+YLLY L + +TV+++ + + A + L A R ++ + N+WY+ D ++ + T+++ SPK KEF K + +MPVW E+ KC+ ++ H+ + V+ F GG+ R + F+ L +V + + + + + T V + +++ TD+ G + + + + + FAS + +E VI ++ + R L +D+ G SV+G FE AHQ++ G ++ ++SGG + T F K++ + + G YY NYP+IDS + T +K G+K V G + A G +S Y +VVP +
Sbjct: 145 SADHDLSGFFDLPEGSNISANQDFLELPKGVHFLGEINEPSTLFIRSCYRHLLDIVLDNNSS--VRNLIITGNPGIGKTYFGYYLLYNLIQRNQTVMYDSHSTGHVIVFDQEAFYLYEVLNADQIRAFLSNANNWYIVDGKEPQKA--TAKTILVCSPKKAIFKEFEKFQLSSTRYMPVWSYAEISKCKDKLYNHLQNNLVKTLFDKWGGIPRFVLEKATDYSHQCKLQEAIDACDFDILDYVGATEAKDTSHKLIHIVTNPLVVDVNIVNEQEQTDVDGGNDVEYIEEDPP-YSQKIIKFASEYVAERVIMRLELRNRGKL---------RRDLFSSLSEGTSNSVLGRYFEEIAHQLL--RGGGTFDIRS---LESGGRPTTTKP----FTKQDKIYTFSDVNGITDGCYYRPDNPNYPSIDSIVAPNELYQMTTAKSHPIKMIGLKNVYG-------KLARTGDIS-----YYFVVPAQ 591 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7793.15959.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7793.15959.1 >prot_E_fasciculatus_S2_contig7793.15959.1 ID=prot_E_fasciculatus_S2_contig7793.15959.1|Name=mRNA_E_fasciculatus_S2_contig7793.15959.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=539bp MQTPVCDVVPSADFCASSAEQNITHVSSVMDGPIFFPLPVAVETKLADFGback to top mRNA from alignment at E_fasciculatus_S2_contig7793:670..4480+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7793.15959.1 ID=mRNA_E_fasciculatus_S2_contig7793.15959.1|Name=mRNA_E_fasciculatus_S2_contig7793.15959.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3811bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7793:670..4480+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7793:670..4480+ >mRNA_E_fasciculatus_S2_contig7793.15959.1 ID=mRNA_E_fasciculatus_S2_contig7793.15959.1|Name=mRNA_E_fasciculatus_S2_contig7793.15959.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1617bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7793:670..4480+ (Ectocarpus fasciculatus EfasUO2)back to top |