mRNA_E_fasciculatus_S2_contig7749.15913.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Match: Rhomboid (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI) HSP 1 Score: 307 bits (787), Expect = 1.830e-101 Identity = 156/177 (88.14%), Postives = 168/177 (94.92%), Query Frame = 1
Query: 31 DRTGQVEIRRLLMSPFLHGDDLHLYFNMASFLLKGVSLEITMGTKAFFGLLSFSLLASQMLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSAHTRYATWLELVLISILVPNASFLGHLCGILAGVLYVEVPIVLHVLNPFTGVSLNNNSRGPSYTYN 561
+RTG+VEIRRLLMSPF+HGDD+HLY+NMASFLLKGVSLE+TMGT+AF GLLSFSLLASQ LMMLSAWVLLVVFDVPSPMHAC VGFSGVLFALKYVLSRRSPGVT+VMGFS HTRYATWLELVLIS++VPNASFLGHLCGILAGVLYVEVPIVL V+N FTG+SL NN RG SYTYN
Sbjct: 111 ERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGISLYNNRRGRSYTYN 287
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Match: Serine (protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2V2_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.240e-39 Identity = 78/162 (48.15%), Postives = 107/162 (66.05%), Query Frame = 1
Query: 1 QLLSPRSLSLDRT-GQVEIRRLLMSPFLHGDDLHLYFNMASFLLKGVSLEITMGTKAFFGLLSFSLLASQMLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSAHTRYATWLELVLISILVPNASFLGHLCGILAGVLYVEVP 483
+L +P SL DR + R++ S +HGDD HLY NM SFL KG +LE +G+ F + + LL +L+++ A VL F +P P+H C+VGFSGVLFALK +L+ SP ++V GF T+YA WLELV+I LVP +SF+GH+CGILAG ++V P
Sbjct: 60 ELFAPYSLCPDRVLSHWDWTRIVASALIHGDDWHLYHNMVSFLWKGYNLEYKLGSVRFLLTVGYLLLLCHVLVVVVALVLATRFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAYSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVFSP 221
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Match: Rhomboid (domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RKV0_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.160e-38 Identity = 77/164 (46.95%), Postives = 107/164 (65.24%), Query Frame = 1
Query: 1 QLLSPRSLSLDRT-GQVEIRRLLMSPFLHGDDLHLYFNMASFLLKGVSLEITMGTKAFFGLLSFSLLASQMLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSAHTRYATWLELVLISILVPNASFLGHLCGILAGVLYVEVPIV 489
+L +P SL DR ++ R+++S +H DD HLY NM SFL KG +LE G+ F + + LL +L+++ A VL F +P P+H C+VGFSGVLFALK +L+ SP ++V GF T+YA WLELV+I LVP +SF GH+CGILAG ++V P +
Sbjct: 62 ELFAPYSLCPDRVISHWDLTRIVVSGLIHVDDWHLYHNMISFLWKGYNLEYKAGSVRFLLTVGYLLLLCHVLVVVVALVLATGFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFRVPTKYAAWLELVVIHFLVPRSSFTGHMCGILAGYIFVYSPAI 225
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Match: Rhomboid (domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D013_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.230e-38 Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 1
Query: 1 QLLSPRSLSLDRT-GQVEIRRLLMSPFLHGDDLHLYFNMASFLLKGVSLEITMGTKAFFGLLSFSLLASQMLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSAHTRYATWLELVLISILVPNASFLGHLCGILAGVLYVEVP 483
+L +P SL DR + +RL+ S +H DD HLY NM SFL KG +LE +G+ F + + L+ +L+++ A +L F +P+P+H C+VGFSGVLFALK +L+ SP ++V GF T+YA WLELV+I LVP +SF+GH+CGILAG ++V P
Sbjct: 63 ELFAPFSLCPDRVLSNWDWKRLVASGLIHVDDWHLYHNMISFLWKGCNLEYKLGSVRFLLTVGYLLVLCHVLVVMVALILATGFQMPAPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYSP 224
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Match: Serine (protease family S54 n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XD54_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.310e-38 Identity = 77/164 (46.95%), Postives = 109/164 (66.46%), Query Frame = 1
Query: 1 QLLSPRSLSLDRT-GQVEIRRLLMSPFLHGDDLHLYFNMASFLLKGVSLEITMGTKAFFGLLSFSLLASQMLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSAHTRYATWLELVLISILVPNASFLGHLCGILAGVLYVEVPIV 489
+L +P SL DR + R++ S +H DD HLY NM SFL KG +LE MG+ F + + L+ +L+++ A VL + F +P P+H C+VGFSGVLFALK +L+ SP ++V GF T+YA WLELV+I LVP +SF+GH+CGILAG ++V P++
Sbjct: 60 ELFAPYSLCPDRVLSHWDWMRIVASGLIHVDDWHLYHNMISFLWKGYNLEDKMGSVRFLLTVGYLLVLCHVLVVVVALVLAMGFQMPEPLHQCSVGFSGVLFALKVLLNHNSPTFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYFPVM 223
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Match: Rhomboid (domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2QA40_PHYPN) HSP 1 Score: 142 bits (357), Expect = 5.340e-38 Identity = 78/173 (45.09%), Postives = 112/173 (64.74%), Query Frame = 1
Query: 1 QLLSPRSLSLDRT-GQVEIRRLLMSPFLHGDDLHLYFNMASFLLKGVSLEITMGTKAFFGLLSFSLLASQMLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSAHTRYATWLELVLISILVPNASFLGHLCGILAGVLYVEVPIVLHVLNPFTG 516
++ +P SL DR G ++ R+++S +H DD HLY NM SFL KG +LE MG+ F + L+ +L+++ A VL F +P P++ C+VGFSGVLFALK +L+ SP ++V GF T+YA WLELV+I LVP +SF+GH+CGILAG +YV + +L+ G
Sbjct: 62 EIFAPYSLCPDRVIGHWDLTRIVVSGLIHVDDWHLYHNMISFLWKGYNLEYKMGSVRFLLTVGCLLVLCHVLVVIVAVVLATGFQMPGPLYQCSVGFSGVLFALKVLLNHNSPTFSSVYGFRVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIYVYSSAMQSILSSGAG 234
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY11_9EUKA) HSP 1 Score: 140 bits (352), Expect = 1.430e-37 Identity = 78/165 (47.27%), Postives = 103/165 (62.42%), Query Frame = 1
Query: 55 RRLLMSPFLHGDDLHLYFNMASFLLKGVSLEITMGTKAFFGLLSFSLLASQMLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSAHTRYATWLELVLISILVPNASFLGHLCGILAGVLYVEVPIVLHVLNPFTGVSLNNNSRGPS 549
+RL++S F H DD HLY+NM+S L KGV LE GT+ F G+ L S + +AW++ + S M C VGFS VLFA K VL+ SP +T V G S +YA WLELV+ISI+ PNASFLGHLCGILAG++YV + + + F+ S + + PS
Sbjct: 76 KRLVLSAFYHADDYHLYYNMSSLLWKGVQLEQQFGTEEFIGMTLVLLGLSHSFYVAAAWIMYTLGISSSSMQTCAVGFSAVLFAYKVVLNFNSPRMTNVYGISVPLKYACWLELVMISIITPNASFLGHLCGILAGLVYVTGGRAIMLGSIFSAASSSAPASAPS 240
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Match: Rhomboid (domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4F7_HYAAE) HSP 1 Score: 139 bits (350), Expect = 6.850e-37 Identity = 75/160 (46.88%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 1 QLLSPRSLSLDRT-GQVEIRRLLMSPFLHGDDLHLYFNMASFLLKGVSLEITMGTKAFFGLLSFSLLASQMLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSAHTRYATWLELVLISILVPNASFLGHLCGILAGVLYVE 477
+L P L DR Q E+ R++ S +H D+ HLY NM SFL KG +LE +G+ F + F L S L++ A +L F +P P+H C+VGFS VLFALK +L+ SP +T+ GF T+YA WLELV I +LVP +SF+GH+CGILAG + V
Sbjct: 62 ELFHPYLLCPDRVLNQFELMRIVASGLIHADEWHLYHNMISFLWKGYNLEYKLGSVQFLLTVGFLLALSHTLVIAVALILATCFQMPGPLHQCSVGFSSVLFALKVILNHDSPAFSTIYGFCVPTKYAAWLELVAIYLLVPQSSFMGHMCGILAGYICVR 221
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Match: Rhomboid (domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5H6_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.400e-36 Identity = 73/138 (52.90%), Postives = 95/138 (68.84%), Query Frame = 1
Query: 49 EIRRLLMSPFLHGDDLHLYFNMASFLLKGVSLEITMGTKAFFGLLSFSLLASQMLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSAHTRYATWLELVLISILVPNASFLGHLCGILAG 462
E RL+ + F HGDD+HLY NM SFL KG LE MG+ F +L++ LL S L++L+++++L P C++GFS VLF LK VL+ SP T++ GF T+YA WLELVLI +LVPNASFLGHLCGI+AG
Sbjct: 46 EWERLIGAAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYRFACVLAYLLLVSHGLIVLTSYLILKYQHNPHAWTQCSLGFSAVLFGLKVVLNSESPNTTSIYGFHVPTKYAAWLELVLIHVLVPNASFLGHLCGIVAG 183
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Match: Putative (rhomboid-related protein 4 (Fragment) n=2 Tax=Triatominae TaxID=70999 RepID=A0A0V0G6J9_TRIDM) HSP 1 Score: 135 bits (341), Expect = 1.920e-36 Identity = 77/171 (45.03%), Postives = 106/171 (61.99%), Query Frame = 1
Query: 55 RRLLMSPFLHGDDLHLYFNMASFLLKGVSLEITMGTKAFFGLLSFSLLASQMLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSAHTRYATWLELVLISILVPNASFLGHLCGILAGVLYVEVP---IVLHVLNPFTGVSLNNNSRGPSYTY 558
+ LL+S F HGDD+HLY+NM SFLLKG +LE G+ F LL F L + + + +L + S +++C +GFSGV+FALK + + S G +MG T+YA W EL+ I ILVPNASFLGHL GI+AGVLY++ P I+ FTGV + + + +Y Y
Sbjct: 67 KTLLLSAFEHGDDMHLYYNMISFLLKGRTLEPLYGSANFALLLGFLCLMTSSIYVSLGVLLSNMLHDSSLLYSCAIGFSGVIFALKIITTDNSSGSNLIMGIRVPTKYAAWAELIAIHILVPNASFLGHLAGIIAGVLYIKTPLKGIIDGACTAFTGVPIYHQTYRDNYYY 237 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7749.15913.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7749.15913.1 >prot_E_fasciculatus_S2_contig7749.15913.1 ID=prot_E_fasciculatus_S2_contig7749.15913.1|Name=mRNA_E_fasciculatus_S2_contig7749.15913.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=187bp QLLSPRSLSLDRTGQVEIRRLLMSPFLHGDDLHLYFNMASFLLKGVSLEIback to top mRNA from alignment at E_fasciculatus_S2_contig7749:4569..5623+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7749.15913.1 ID=mRNA_E_fasciculatus_S2_contig7749.15913.1|Name=mRNA_E_fasciculatus_S2_contig7749.15913.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1055bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7749:4569..5623+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7749:4569..5623+ >mRNA_E_fasciculatus_S2_contig7749.15913.1 ID=mRNA_E_fasciculatus_S2_contig7749.15913.1|Name=mRNA_E_fasciculatus_S2_contig7749.15913.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=561bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7749:4569..5623+ (Ectocarpus fasciculatus EfasUO2)back to top |