mRNA_E_fasciculatus_S2_contig7743.15910.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C9_ECTSI) HSP 1 Score: 189 bits (480), Expect = 2.340e-57 Identity = 106/223 (47.53%), Postives = 135/223 (60.54%), Query Frame = 1
Query: 1 LAGWEKCVMWLSRAYTWGYLPLAAFSVPFTFLGGTNEQGTFCYNR---RRADKYWRHRNVLGYASNNASLIVQFVLLLVLFVKPMLESQERNRTGGAVYRRVIIRNLVCTALIGMSYLITTVFVILAFLKESPDHNTASRVADGFPMVNVLVTLCFTEITLPLGFTSCMKSCSAG----NATRIEAGG----------------GVATAAKIVPLEDLPPQAP 600
LA WEK + W SR Y W YLPL A + F GGT+ GTFCYN A + N + NN L+VQF+LLL LFV+PML E ++GGAVYRRV++RN+ CTA I +SY ITT+ V++A L+ES + N ++++ D N L TLC TEITLPLGF SCMK+CS G N+T+ +A G T KI+PLE+LPPQAP
Sbjct: 2 LAWWEKAIRWWSRLYGWVYLPLMALMLGTRFPGGTDPAGTFCYNGIVPTGASELTTSNNAQSFGINNVLLVVQFILLLGLFVQPMLVRVEGAQSGGAVYRRVVLRNVFCTAGIVISYAITTLVVVIALLRESVESNKSAQIRDVALAANSLGTLCLTEITLPLGFRSCMKACSTGTAMANSTKTQAVGQTTANPGTAAAGATIISTTTTIKIIPLEELPPQAP 224
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY97_9PHAE) HSP 1 Score: 181 bits (458), Expect = 3.440e-52 Identity = 89/175 (50.86%), Postives = 119/175 (68.00%), Query Frame = 1
Query: 1 LAGWEKCVMWLSRAYTWGYLPLAAFSVPFTFLGGTNEQG---TFCYNRRRADKYWR--HRNVLGYASNNASLIVQFVLLLVLFVKPMLESQERNRTGGAVYRRVIIRNLVCTALIGMSYLITTVFVILAFLKESPDHNTASRVADGFPMVNVLVTLCFTEITLPLGFTSCMKSCS 510
LA WE ++W+SR Y W YLP+ A +P+ F GGTN++ TFC N D + NVLGY SN SL++QFVLLL+LFV+P+L E +++G A+YR V+I+N+ CT + +Y +TTV VI A +++S D NTAS AD P+VN VTLC TEI LPLGF+SC K+CS
Sbjct: 150 LAWWETVIVWISRGYAWIYLPIVAVVIPYQFRGGTNDEASVKTFCVNGYHMDDDTDEVNDNVLGYGSNMGSLVIQFVLLLILFVRPLLVRLEGSQSGEAMYRMVVIKNITCTIAVVTAYAVTTVVVIAALIRQSNDSNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACS 324
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG96_ECTSI) HSP 1 Score: 157 bits (396), Expect = 2.400e-43 Identity = 78/172 (45.35%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 1 LAGWEKCVMWLSRAYTWGYLPLAAFSVPFTFLGGTNEQGTFCYNRRRADKYWR--HRNVLGYASNNASLIVQFVLLLVLFVKPMLESQERNRTGGAVYRRVIIRNLVCTALIGMSYLITTVFVILAFLKESPDHNTASRVADGFPMVNVLVTLCFTEITLPLGFTSCMKSCS 510
LA WE ++W+SR Y W YLP+ A ++P+ F GGTN++ TFC N D H N+ GY SN SLI+QFVLLL+LFV+P+L E +++G A+YRRV+I+N+ CT + +Y +TTV VI A L+++ D NT I LPLGFTSC K+CS
Sbjct: 150 LAWWETAIVWISRGYAWIYLPIVAVAIPYQFRGGTNDERTFCINGYNMDDDADEVHENIRGYGSNMGSLIIQFVLLLILFVRPLLVRLEGSQSGEAIYRRVVIKNITCTIAVVTAYAVTTVVVIAALLRQNNDSNT---------------------IALPLGFTSCWKACS 300
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K249_9PHAE) HSP 1 Score: 150 bits (380), Expect = 2.010e-42 Identity = 75/179 (41.90%), Postives = 110/179 (61.45%), Query Frame = 1
Query: 1 LAGWEKCVMWLSRAYTWGYLPLAAFSVPFTFLGGTNEQGTFCYNRR-RADKYWRHRNVLGYASNNASLIVQFVLLLVLFVKPMLESQERNRTGGAVYRRVIIRNLVCTALIGMSYLITTVFVILAFLKESPDHNTASRVADGFPMVNVLVTLCFTEITLPLGFTSCMKSCSAGNATRIE 534
LA WE C+ W SR Y W L AF + + +GTFC + D+ + LG+ NN LI+QF LLL +FVKP++ Q ++GGAVYRR+++RN+ CT I +Y +TTV V+L FL +P A+++AD P N+ VTLC TE++LPLGF+SC+K+ A ++ ++
Sbjct: 32 LAIWEACITWWSRFYGWVVLTTGAFFLAAQASSVPSLEGTFCLTLDLQEDEDVTFSDALGFVINNGILIIQFALLLAIFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTELSLPLGFSSCVKAIKAETSSVVD 210
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA0_9PHAE) HSP 1 Score: 148 bits (374), Expect = 1.610e-40 Identity = 73/157 (46.50%), Postives = 99/157 (63.06%), Query Frame = 1
Query: 1 LAGWEKCVMWLSRAYTWGYLPLAAFSVPFTFLGGTNEQGTFCYNRRRADKYWRH-RNVLGYASNNASLIVQFVLLLVLFVKPMLESQERNRTGGAVYRRVIIRNLVCTALIGMSYLITTVFVILAFLKESPDHNTASRVADGFPMVNVLVTLCFTEI 468
L WE + W SR + W YLP++ + +F G N +GT C+N + R +V G+A NN L VQ+VLLL +F+KPML S ++GGAVYRRV+IRN+VCT I +Y+ITTV V+LA L PD + A+ V D P +N+ VTLC TE+
Sbjct: 87 LTSWENGITWWSRFWAWIYLPVSGTVLGLSFPGEVNSEGTACFNSYGEETETREVGDVAGFAGNNVLLTVQYVLLLAMFIKPMLVSHGNTQSGGAVYRRVVIRNIVCTIGIACAYVITTVVVVLALLSSRPDTDKAAAVGDIVPSINICVTLCLTEV 243
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA3_9PHAE) HSP 1 Score: 149 bits (377), Expect = 2.230e-40 Identity = 75/179 (41.90%), Postives = 109/179 (60.89%), Query Frame = 1
Query: 1 LAGWEKCVMWLSRAYTWGYLPLAAFSVPFTFLGGTNEQGTFCYNRR-RADKYWRHRNVLGYASNNASLIVQFVLLLVLFVKPMLESQERNRTGGAVYRRVIIRNLVCTALIGMSYLITTVFVILAFLKESPDHNTASRVADGFPMVNVLVTLCFTEITLPLGFTSCMKSCSAGNATRIE 534
LA WE C+ W SR Y W L A + + +GTFC + D+ + LG+ NN LI+QF LLL +FVKP++ Q ++GGAVYRR+++RN+ CT I +Y +TTV V+L FL +P A+++AD P N+ VTLC TEI+LPLGF+SC+K+ A ++ ++
Sbjct: 133 LAIWEACITWWSRFYGWVVLTTGALFLAAQASSVPSLEGTFCLTLDLKEDEDVTFSDTLGFVINNGILIIQFALLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEISLPLGFSSCVKAIKAETSSVVD 311
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG97_ECTSI) HSP 1 Score: 137 bits (345), Expect = 6.460e-36 Identity = 67/136 (49.26%), Postives = 95/136 (69.85%), Query Frame = 1
Query: 1 LAGWEKCVMWLSRAYTWGYLPLAAFSVPFTFLGGTNEQGTFCYNRRRADK---YWRHR--NVLGYASNNASLIVQFVLLLVLFVKPMLESQERNRTGGAVYRRVIIRNLVCTALIGMSYLITTVFVILAFLKESPD 393
L+ WEK V+W+ RA+ W YLPLA+ V T+ GGTNE+GTFC N + D+ Y R N GYA NA L+VQ+VLLL+LFV+P++ E ++GGAVYR V+IRN+ CT + +SY+ITT+ ++A L++ P+
Sbjct: 166 LSCWEKGVIWICRAFAWIYLPLASIFVSATYPGGTNEEGTFCENGFKRDEDVNYEREASDNAYGYAVTNAMLLVQYVLLLILFVRPLMVRLEGAQSGGAVYRSVVIRNISCTVAVVVSYIITTIVTVIALLRQHPN 301
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ65_9PHAE) HSP 1 Score: 130 bits (328), Expect = 5.050e-34 Identity = 65/139 (46.76%), Postives = 92/139 (66.19%), Query Frame = 1
Query: 1 LAGWEKCVMWLSRAYTWGYLPLAAFSVPFTFLGGTNEQGTFC---YNRRRADKYWRHR--NVLGYASNNASLIVQFVLLLVLFVKPMLESQERNRTGGAVYRRVIIRNLVCTALIGMSYLITTVFVILAFLKESPDHNT 402
L+ WEK V+W+ RA+ W YLPLA+ V T+ G QGTFC +NR Y R N GYA NA L+VQ+VLLL+LFV+P++ E ++GGAVYR V++RN+ CTA + +SY+ITT+ ++A L++ P+ T
Sbjct: 120 LSCWEKGVIWICRAFAWIYLPLASIFVSATYPGANIYQGTFCENSFNRDEDVNYEREASDNAFGYAVTNAMLLVQYVLLLILFVRPLMVRLEGVQSGGAVYRSVVVRNVSCTAAVVVSYIITTIVTVIALLRQHPNDTT 258
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN45_ECTSI) HSP 1 Score: 125 bits (313), Expect = 1.210e-32 Identity = 58/123 (47.15%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 166 NVLGYASNNASLIVQFVLLLVLFVKPMLESQERNRTGGAVYRRVIIRNLVCTALIGMSYLITTVFVILAFLKESPDHNTASRVADGFPMVNVLVTLCFTEITLPLGFTSCMKSCSAGNATRIE 534
+ LG+ NN L++QFVLLL +FVKP++ Q ++GGAVYRR+++RN+ CT I +Y +TTV V+L FL +P A+++AD P N+ VTLC TE++LPLGF+SC+KS A ++ ++
Sbjct: 58 DTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHIQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCVTEMSLPLGFSSCVKSIKAETSSVVD 180
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN54_ECTSI) HSP 1 Score: 119 bits (298), Expect = 6.920e-30 Identity = 63/139 (45.32%), Postives = 83/139 (59.71%), Query Frame = 1
Query: 1 LAGWEKCVMWLSRAYTWGYLPLAAFSVPFTFLGGTNEQGTFCYNRRRADKYWRH-RNVLGYASNNASLIVQFVLLLVLFVKPMLESQERNRTGGAVYRRVIIRNLVCTALIGMSYLITTVFVILAFLKESPDHNTASRV 414
L WEK + W SR + W YLP++A + TF G N +GT C+N R + +V G+ASNN L VQ+VLLL +F+KPML SQ ++GGAVYRRV+IRN+VCT I +Y+ITT D N + V
Sbjct: 77 LTCWEKGITWWSRFWAWIYLPVSATFLGLTFPGEVNSEGTACFNSYREETDTAEVGDVAGFASNNVLLTVQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTIGIACAYVITTXXXXXXXXXXXSDTNKSGVV 215 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7743.15910.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7743.15910.1 >prot_E_fasciculatus_S2_contig7743.15910.1 ID=prot_E_fasciculatus_S2_contig7743.15910.1|Name=mRNA_E_fasciculatus_S2_contig7743.15910.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=193bp MWLSRAYTWGYLPLAAFSVPFTFLGGTNEQGTFCYNRRRADKYWRHRNVLback to top mRNA from alignment at E_fasciculatus_S2_contig7743:3087..5444- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7743.15910.1 ID=mRNA_E_fasciculatus_S2_contig7743.15910.1|Name=mRNA_E_fasciculatus_S2_contig7743.15910.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2358bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7743:3087..5444- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7743:3087..5444- >mRNA_E_fasciculatus_S2_contig7743.15910.1 ID=mRNA_E_fasciculatus_S2_contig7743.15910.1|Name=mRNA_E_fasciculatus_S2_contig7743.15910.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=579bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7743:3087..5444- (Ectocarpus fasciculatus EfasUO2)back to top |