mRNA_E_fasciculatus_S2_contig7740.15907.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG6_9PHAE) HSP 1 Score: 248 bits (632), Expect = 1.690e-75 Identity = 123/158 (77.85%), Postives = 138/158 (87.34%), Query Frame = -3
Query: 238 RRTSNAAVTAELGIRPLKSGRHERKLTWQDRMCGMGEERLPRTAWKAKWAIEKRGRQPTEWVKVVDGVWKGFDIDESKTLEMEGLEGFKEEISVAFALREKQNLAEEIKVKPGLGLYGLLKEGRGFKEYLHGPMDAGTKLKVKFRTGDIGLRERGRRY 711
RRTSNAAV AELGI+ L+SGR RKLTWQ RMCGMGEERLPR W+AKWA +KRGRQPTEWVKVV+ VWKG DIDE +TLE EGL+GFKE+ISVA A RE+QNL ++IK K GL +YG+LKEG GFK+YLHGPMDAGTKLKVKFRTGDIGLRER RR+
Sbjct: 74 RRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKQIKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRH 231
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L448_9PHAE) HSP 1 Score: 244 bits (622), Expect = 1.740e-75 Identity = 122/158 (77.22%), Postives = 136/158 (86.08%), Query Frame = -3
Query: 238 RRTSNAAVTAELGIRPLKSGRHERKLTWQDRMCGMGEERLPRTAWKAKWAIEKRGRQPTEWVKVVDGVWKGFDIDESKTLEMEGLEGFKEEISVAFALREKQNLAEEIKVKPGLGLYGLLKEGRGFKEYLHGPMDAGTKLKVKFRTGDIGLRERGRRY 711
RRTSNAAV AELGI+ L+SGR RKLTWQ RMCGMGEERLPR W+AKWA +KRGRQPTEWVKVV+ VWKG DI E +TLE EGL+GFKE+ISVA A RE+QNL +E K K GL +YG+LKEG GFK+YLHGPMDAGTKLKVKFRTGDIGLRER RR+
Sbjct: 12 RRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIGEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRH 169
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Match: Reverse (transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5S8_9PHAE) HSP 1 Score: 244 bits (623), Expect = 1.160e-74 Identity = 122/158 (77.22%), Postives = 136/158 (86.08%), Query Frame = -3
Query: 238 RRTSNAAVTAELGIRPLKSGRHERKLTWQDRMCGMGEERLPRTAWKAKWAIEKRGRQPTEWVKVVDGVWKGFDIDESKTLEMEGLEGFKEEISVAFALREKQNLAEEIKVKPGLGLYGLLKEGRGFKEYLHGPMDAGTKLKVKFRTGDIGLRERGRRY 711
RRTSNAAV AELGI+ L+SGR RKLTWQ RMCGMGEERLPR W+AKWA +KRGRQPTEWVKVV+ VWKG DIDE +TLE EGL+GFKE+ISVA A RE+QNL +E K GL +YG+LKEG GFK+YLHGPMDAGTKLKVKFRTGDIGLRER RR+
Sbjct: 127 RRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKETKDLDGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRH 284
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR4_9PHAE) HSP 1 Score: 242 bits (617), Expect = 1.450e-74 Identity = 122/158 (77.22%), Postives = 136/158 (86.08%), Query Frame = -3
Query: 238 RRTSNAAVTAELGIRPLKSGRHERKLTWQDRMCGMGEERLPRTAWKAKWAIEKRGRQPTEWVKVVDGVWKGFDIDESKTLEMEGLEGFKEEISVAFALREKQNLAEEIKVKPGLGLYGLLKEGRGFKEYLHGPMDAGTKLKVKFRTGDIGLRERGRRY 711
RRTSNAAV AELGI+ L+SGR RKLTWQ RMCGMGEERL R W+AKWA +KRGRQPTEWVKVV+ VWKG DIDE +TLE EGL+GFKE+ISVA A RE+QNL +E K K GL +YG+LKEG GFK+YLHGPMDAGTKLKVKFRTGDIGLRER RR+
Sbjct: 36 RRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLLRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLWKESKDKEGLKVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRH 193
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI54_9PHAE) HSP 1 Score: 246 bits (629), Expect = 5.860e-74 Identity = 123/158 (77.85%), Postives = 137/158 (86.71%), Query Frame = -3
Query: 238 RRTSNAAVTAELGIRPLKSGRHERKLTWQDRMCGMGEERLPRTAWKAKWAIEKRGRQPTEWVKVVDGVWKGFDIDESKTLEMEGLEGFKEEISVAFALREKQNLAEEIKVKPGLGLYGLLKEGRGFKEYLHGPMDAGTKLKVKFRTGDIGLRERGRRY 711
RRTSNAAV AELGI+ L+SGR RKLTWQ RMCGMGEERLPR W+AKWA +KRGRQPTEWVKVV+ VWKG DIDE +TLE EGL+GFKE+ISVA A RE+QNL +E K K GL +YG+LKEG GFK+YLHGPMDAGTKLKVKFRTGDIGLRER RR+
Sbjct: 159 RRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREQQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRH 316
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT82_9PHAE) HSP 1 Score: 244 bits (624), Expect = 6.340e-74 Identity = 122/157 (77.71%), Postives = 136/157 (86.62%), Query Frame = -3
Query: 238 RTSNAAVTAELGIRPLKSGRHERKLTWQDRMCGMGEERLPRTAWKAKWAIEKRGRQPTEWVKVVDGVWKGFDIDESKTLEMEGLEGFKEEISVAFALREKQNLAEEIKVKPGLGLYGLLKEGRGFKEYLHGPMDAGTKLKVKFRTGDIGLRERGRRY 708
RTSNAAV AELGI+ L+SGR RKLTWQ RMCGMGEERLPR W+AKWA +KRGRQPTEWVKVV+ VWKG DIDE +TLE EGL+GFKE+ISVA A RE+QNL +E K K GL +YG+LKEG GFK+YLHGPMDAGTKLKVKFRTGDIGLRER RR+
Sbjct: 119 RTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRH 275
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRI2_9PHAE) HSP 1 Score: 241 bits (615), Expect = 9.900e-74 Identity = 120/156 (76.92%), Postives = 134/156 (85.90%), Query Frame = -3
Query: 238 TSNAAVTAELGIRPLKSGRHERKLTWQDRMCGMGEERLPRTAWKAKWAIEKRGRQPTEWVKVVDGVWKGFDIDESKTLEMEGLEGFKEEISVAFALREKQNLAEEIKVKPGLGLYGLLKEGRGFKEYLHGPMDAGTKLKVKFRTGDIGLRERGRRY 705
TSNAAV AELGI+ L+SGR RKLTWQ RMCGMGEERLPR W+AKWA +KRGRQPTEWVKVV+ VWKG DIDE +TLE EGL+GFKE+ISVA A RE+QNL +E K K GL +YG+LKEG GFK+YLHGPMDAGTKL VKFRTGDIGLRER RR+
Sbjct: 32 TSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGLGFKDYLHGPMDAGTKLNVKFRTGDIGLRERRRRH 187
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Match: Reverse (transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRL5_9PHAE) HSP 1 Score: 246 bits (629), Expect = 2.050e-73 Identity = 123/158 (77.85%), Postives = 137/158 (86.71%), Query Frame = -3
Query: 238 RRTSNAAVTAELGIRPLKSGRHERKLTWQDRMCGMGEERLPRTAWKAKWAIEKRGRQPTEWVKVVDGVWKGFDIDESKTLEMEGLEGFKEEISVAFALREKQNLAEEIKVKPGLGLYGLLKEGRGFKEYLHGPMDAGTKLKVKFRTGDIGLRERGRRY 711
RRTSNAAV AELGI+ L+SGR RKLTWQ RMCGMGEERLPR W+AKWA +KRGRQPTEWVKVV+ VWKG DIDE +TLE EGL+GFKE+ISVA A RE+QNL +E K K GL +YG+LKEG GFK+YLHGPMDAGTKLKVKFRTGDIGLRER RR+
Sbjct: 160 RRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRH 317
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Match: Reverse (transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K739_9PHAE) HSP 1 Score: 246 bits (629), Expect = 3.290e-73 Identity = 123/158 (77.85%), Postives = 137/158 (86.71%), Query Frame = -3
Query: 238 RRTSNAAVTAELGIRPLKSGRHERKLTWQDRMCGMGEERLPRTAWKAKWAIEKRGRQPTEWVKVVDGVWKGFDIDESKTLEMEGLEGFKEEISVAFALREKQNLAEEIKVKPGLGLYGLLKEGRGFKEYLHGPMDAGTKLKVKFRTGDIGLRERGRRY 711
RRTSNAAV AELGI+ L+SGR RKLTWQ RMCGMGEERLPR W+AKWA +KRGRQPTEWVKVV+ VWKG DIDE +TLE EGL+GFKE+ISVA A RE+QNL +E K K GL +YG+LKEG GFK+YLHGPMDAGTKLKVKFRTGDIGLRER RR+
Sbjct: 232 RRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRH 389
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Match: Reverse (transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN8_9PHAE) HSP 1 Score: 245 bits (626), Expect = 4.100e-73 Identity = 123/158 (77.85%), Postives = 136/158 (86.08%), Query Frame = -3
Query: 238 RRTSNAAVTAELGIRPLKSGRHERKLTWQDRMCGMGEERLPRTAWKAKWAIEKRGRQPTEWVKVVDGVWKGFDIDESKTLEMEGLEGFKEEISVAFALREKQNLAEEIKVKPGLGLYGLLKEGRGFKEYLHGPMDAGTKLKVKFRTGDIGLRERGRRY 711
RRTSNAAV AELGI+ L+SGR RKLTWQ RMCGMGEERLPR W+AKWA +KRGRQPT WVKVVD VWKG DIDE +TLE EGL+GFKE+ISVA A RE+QNL +E K K GL +YG+LKEG GFK+YLHGPMDAGTKLKVKFRTGDIGLRER RR+
Sbjct: 225 RRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTGWVKVVDDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRH 382 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7740.15907.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7740.15907.1 >prot_E_fasciculatus_S2_contig7740.15907.1 ID=prot_E_fasciculatus_S2_contig7740.15907.1|Name=mRNA_E_fasciculatus_S2_contig7740.15907.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=210bp MSPVLNLTLSFVPASIGPCRYSLNPLPSFNRPYKPRPGLTLISSARFCFSback to top mRNA from alignment at E_fasciculatus_S2_contig7740:4380..5708+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7740.15907.1 ID=mRNA_E_fasciculatus_S2_contig7740.15907.1|Name=mRNA_E_fasciculatus_S2_contig7740.15907.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1329bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7740:4380..5708+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7740:4380..5708+ >mRNA_E_fasciculatus_S2_contig7740.15907.1 ID=mRNA_E_fasciculatus_S2_contig7740.15907.1|Name=mRNA_E_fasciculatus_S2_contig7740.15907.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=630bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7740:4380..5708+ (Ectocarpus fasciculatus EfasUO2)back to top |